RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeastyeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMRA1YCR097W DBF20P32328 564 aa2.21□□□□□ -2.06
HMRA1YCR097W URB2P47108 1174 aa2.21□□□□□ -2.06
HMRA1YCR097W PPM1Q04081 328 aa2.21□□□□□ -2.06
HMRA1YCR097W SGS1P35187 1447 aa2.2□□□□□ -2.06
HMRA1YCR097W PAP1P29468 568 aaKnown RBP2.2□□□□□ -2.06
HMRA1YCR097W AFG3P39925 761 aa2.2□□□□□ -2.06
HMRA1YCR097W DFG10P40526 253 aa2.2□□□□□ -2.06
HMRA1YCR097W ARC1P46672 376 aaKnown RBP2.2□□□□□ -2.06
HMRA1YCR097W SSN8P47821 323 aa2.2□□□□□ -2.06
HMRA1YCR097W PCP1P53259 346 aa2.2□□□□□ -2.06
HMRA1YCR097W VIP1Q06685 1146 aaKnown RBP2.2□□□□□ -2.06
HMRA1YCR097W PRE8P23639 250 aa2.19□□□□□ -2.06
HMRA1YCR097W SYG1P40528 902 aa2.19□□□□□ -2.06
HMRA1YCR097W LAM5P43560 674 aa2.19□□□□□ -2.06
HMRA1YCR097W PLP2Q12017 286 aa2.19□□□□□ -2.06
HMRA1YCR097W SPE4Q12455 300 aa2.19□□□□□ -2.06
HMRA1YCR097W LEU4P06208 619 aaKnown RBP2.18□□□□□ -2.06
HMRA1YCR097W HSC82P15108 705 aaKnown RBP2.18□□□□□ -2.06
HMRA1YCR097W CSE2P33308 149 aa2.18□□□□□ -2.06
HMRA1YCR097W PSY4P38193 441 aa2.18□□□□□ -2.06
HMRA1YCR097W YBR137WP38276 179 aa2.18□□□□□ -2.06
HMRA1YCR097W AXL2P38928 823 aa2.18□□□□□ -2.06
HMRA1YCR097W POP1P41812 875 aa2.18□□□□□ -2.06
HMRA1YCR097W FLC3P53121 802 aa2.18□□□□□ -2.06
HMRA1YCR097W IPI3P53877 555 aa2.18□□□□□ -2.06
HMRA1YCR097W YML037CQ03703 340 aa2.18□□□□□ -2.06
HMRA1YCR097W YDR239CQ03780 787 aa2.18□□□□□ -2.06
HMRA1YCR097W PDS5Q04264 1277 aa2.18□□□□□ -2.06
HMRA1YCR097W SSM4P40318 1319 aa2.17□□□□□ -2.06
HMRA1YCR097W COR1P07256 457 aa2.17□□□□□ -2.06
HMRA1YCR097W KAR9P32526 644 aa2.17□□□□□ -2.06
HMRA1YCR097W FMT1P32785 401 aa2.17□□□□□ -2.06
HMRA1YCR097W SLC1P33333 303 aa2.17□□□□□ -2.06
HMRA1YCR097W RCK2P38623 610 aa2.17□□□□□ -2.06
HMRA1YCR097W MSR1P38714 643 aa2.17□□□□□ -2.06
HMRA1YCR097W MBB1P39534 108 aa2.17□□□□□ -2.06
HMRA1YCR097W MIG3P39943 394 aa2.17□□□□□ -2.06
HMRA1YCR097W PFS2P42841 465 aaKnown RBP2.17□□□□□ -2.06
HMRA1YCR097W UBX4P54730 416 aa2.17□□□□□ -2.06
HMRA1YCR097W RRD2Q12461 358 aa2.17□□□□□ -2.06
HMRA1YCR097W CYC3P06182 269 aa2.16□□□□□ -2.06
HMRA1YCR097W CDC24P11433 854 aaPredicted RBP2.16□□□□□ -2.06
HMRA1YCR097W MKC7P53379 596 aa2.16□□□□□ -2.06
HMRA1YCR097W YMR181CQ03231 154 aa2.16□□□□□ -2.06
HMRA1YCR097W MRD1Q06106 887 aaKnown RBP2.16□□□□□ -2.06
HMRA1YCR097W TIP1P27654 210 aaPredicted RBP2.15□□□□□ -2.07
HMRA1YCR097W ERP2P39704 215 aa2.15□□□□□ -2.07
HMRA1YCR097W MFB1Q04922 465 aa2.15□□□□□ -2.07
HMRA1YCR097W PKH2Q12236 1081 aaKnown RBP2.15□□□□□ -2.07
HMRA1YCR097W KAR3P17119 729 aa2.14□□□□□ -2.07
HMRA1YCR097W SPT10P35208 640 aa2.14□□□□□ -2.07
HMRA1YCR097W YCR041WP37265 110 aa2.14□□□□□ -2.07
HMRA1YCR097W YER186CP40101 306 aa2.14□□□□□ -2.07
HMRA1YCR097W ALG5P40350 334 aa2.14□□□□□ -2.07
HMRA1YCR097W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
HMRA1YCR097W POL4P25615 582 aa2.13□□□□□ -2.07
HMRA1YCR097W KEL1P38853 1164 aaKnown RBP2.13□□□□□ -2.07
HMRA1YCR097W LCL3P53153 274 aa2.13□□□□□ -2.07
HMRA1YCR097W CRH1P53301 507 aa2.13□□□□□ -2.07
HMRA1YCR097W DIA1P54005 336 aa2.13□□□□□ -2.07
HMRA1YCR097W TIM18Q08749 192 aa2.13□□□□□ -2.07
HMRA1YCR097W EST1P17214 699 aaPredicted RBP2.12□□□□□ -2.07
HMRA1YCR097W SLY1P22213 666 aa2.12□□□□□ -2.07
HMRA1YCR097W ITR1P30605 584 aa2.12□□□□□ -2.07
HMRA1YCR097W IME2P32581 645 aa2.12□□□□□ -2.07
HMRA1YCR097W MRPS16Q02608 121 aa2.12□□□□□ -2.07
HMRA1YCR097W SNX3Q08826 162 aaKnown RBP2.12□□□□□ -2.07
HMRA1YCR097W AHC1Q12433 566 aa2.12□□□□□ -2.07
HMRA1YCR097W IZH2Q12442 317 aa2.12□□□□□ -2.07
HMRA1YCR097W RAV1P47104 1357 aa2.11□□□□□ -2.07
HMRA1YCR097W CYS4P32582 507 aaKnown RBP2.11□□□□□ -2.07
HMRA1YCR097W MUD1P32605 298 aaKnown RBP2.11□□□□□ -2.07
HMRA1YCR097W KAP123P40069 1113 aaKnown RBP2.11□□□□□ -2.07
HMRA1YCR097W YSA1Q01976 231 aa2.11□□□□□ -2.07
HMRA1YCR097W SOV1Q04748 898 aa2.11□□□□□ -2.07
HMRA1YCR097W SKM1Q12469 655 aa2.11□□□□□ -2.07
HMRA1YCR097W SMY1P32364 656 aaKnown RBP2.1□□□□□ -2.07
HMRA1YCR097W REC114P32841 428 aa2.1□□□□□ -2.07
HMRA1YCR097W CBP4P37267 147 aa2.1□□□□□ -2.07
HMRA1YCR097W REG2P38232 338 aa2.1□□□□□ -2.07
HMRA1YCR097W CCT6P39079 546 aa2.1□□□□□ -2.07
HMRA1YCR097W YIP1P53039 248 aa2.1□□□□□ -2.07
HMRA1YCR097W YGR018CP53211 109 aa2.1□□□□□ -2.07
HMRA1YCR097W GTR1Q00582 310 aa2.1□□□□□ -2.07
HMRA1YCR097W ADH1P00330 348 aaKnown RBP2.09□□□□□ -2.07
HMRA1YCR097W CBP6P07253 162 aaPredicted RBP2.09□□□□□ -2.07
HMRA1YCR097W YMR147WP40218 223 aaKnown RBP2.09□□□□□ -2.07
HMRA1YCR097W SAP185P40856 1058 aa2.09□□□□□ -2.07
HMRA1YCR097W ATP22P50273 684 aaPredicted RBP2.09□□□□□ -2.07
HMRA1YCR097W SLG1P54867 378 aa2.09□□□□□ -2.07
HMRA1YCR097W DNL4Q08387 944 aaPredicted RBP2.09□□□□□ -2.07
HMRA1YCR097W YPR022CQ12139 1133 aa2.09□□□□□ -2.07
HMRA1YCR097W SNT1P25357 1226 aa2.08□□□□□ -2.08
HMRA1YCR097W RML2P32611 393 aa2.08□□□□□ -2.08
HMRA1YCR097W IES6P32617 166 aa2.08□□□□□ -2.08
HMRA1YCR097W DTR1P38125 572 aa2.08□□□□□ -2.08
HMRA1YCR097W IMD4P50094 524 aaKnown RBP2.08□□□□□ -2.08
HMRA1YCR097W ADA2Q02336 434 aa2.08□□□□□ -2.08
HMRA1YCR097W VPS38Q05919 439 aa2.08□□□□□ -2.08
HMRA1YCR097W CTI6Q08923 506 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 46.8 ms