RNA–Protein interactions for RNA: tC(GCA)P1

tC(GCA)P1, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)P1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)P1tC(GCA)P1 GFD2P25370 566 aaKnown RBP2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 GUT2P32191 649 aa2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 BEM3P32873 1128 aa2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 YPT52P36018 234 aaKnown RBP2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 APD1P38281 316 aa2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 REI1P38344 393 aaPredicted RBP2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 MEF2P39677 819 aa2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 PRP39P39682 629 aaKnown RBP2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 DLD3P39976 496 aaKnown RBP2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 PRE6P40303 254 aaKnown RBP2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 TED1P40533 473 aa2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 MNT3P40549 630 aa2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 PAC11P40960 533 aa2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 GDS1P41913 522 aa2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 CCT8P47079 568 aaKnown RBP2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 RAD17P48581 401 aa2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 YGR079WP53249 370 aa2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 YNL247WP53852 767 aaKnown RBP2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 MET14Q02196 202 aa2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 IVY1Q04934 453 aa2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 YDR278CQ05612 105 aa2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 ISR1Q06098 443 aaKnown RBP2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 BUD20Q08004 166 aaPredicted RBP2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 ATG29Q12092 213 aa2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 PAR32Q12515 295 aaKnown RBP2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 MTR10Q99189 972 aa2.94□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 HEM4P06174 275 aa2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 RPB2P08518 1224 aaKnown RBP2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 ERG20P08524 352 aaKnown RBP2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 YSF3P0C074 85 aaPredicted RBP2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 RPS21AP0C0V8 87 aaKnown RBP2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 NSP1P14907 823 aaKnown RBP2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 TPS2P31688 896 aaKnown RBP2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 DBF20P32328 564 aa2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 NDI1P32340 513 aa2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 RAD5P32849 1169 aaPredicted RBP2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 LOT5P34234 306 aa2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 YET1P35723 206 aa2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 KKQ8P36004 724 aa2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 ALG3P38179 458 aa2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 YBR062CP38239 180 aa2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 YHR112CP38716 378 aa2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 SEO1P39709 593 aa2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 MDV1P47025 714 aa2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 RNR4P49723 345 aaKnown RBP2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 LYS5P50113 272 aa2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 MPS2P53159 387 aa2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 MNT4P53745 580 aa2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 PFA5Q03289 374 aa2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 VPS16Q03308 798 aa2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 APC4Q04601 652 aa2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 YPR078CQ06813 372 aa2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 RRP40Q08285 240 aaKnown RBP2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 NOB1Q08444 459 aaKnown RBP2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 REX3Q12090 404 aa2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 YDR215CQ12240 137 aa2.93□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 SSC1P0CS90 654 aaKnown RBP2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 PRP6P19735 899 aaPredicted RBP2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 APN1P22936 367 aa2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 GPI12P23797 304 aa2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 PUB1P32588 453 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
tC(GCA)P1tC(GCA)P1 EMP70P32802 667 aa2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 SPC29P33419 253 aa2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 PEX5P35056 612 aa2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 THI80P35202 319 aa2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 GLG1P36143 616 aa2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 OMA1P36163 345 aa2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 MAK5P38112 773 aaPredicted RBP2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 TSL1P38427 1098 aaKnown RBP2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 DIA4P38705 446 aaPredicted RBP2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 GGC1P38988 300 aa2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 AVT7P40501 490 aa2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 YJR141WP47172 347 aaPredicted RBP2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 PGU1P47180 361 aa2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 DUO1P53168 247 aaKnown RBP2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 YGR015CP53208 328 aa2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 YNR021WP53723 404 aaKnown RBP2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 YPL107WQ02873 248 aa2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 THI7Q05998 598 aa2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 SEI1Q06058 285 aa2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 ADY3Q07732 790 aa2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 YLL056CQ12177 298 aa2.92□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 LEU4P06208 619 aaKnown RBP2.91□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 GAL3P13045 520 aa2.91□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 CTA1P15202 515 aa2.91□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 VPS33P20795 691 aa2.91□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 DBF4P32325 704 aa2.91□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 RRP1P35178 278 aaPredicted RBP2.91□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 AUR1P36107 401 aaPredicted RBP2.91□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 JNM1P36224 373 aa2.91□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 ARL1P38116 183 aaKnown RBP2.91□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 YSW1P38280 609 aa2.91□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 PMC1P38929 1173 aaPredicted RBP2.91□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 FRT2P39734 528 aa2.91□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 NDE1P40215 560 aa2.91□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 JEM1P40358 645 aa2.91□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 RIC1P40395 1056 aa2.91□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 VHR1P40522 640 aa2.91□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 APQ12P40532 138 aa2.91□□□□□ -1.94
tC(GCA)P1tC(GCA)P1 YIR020CP40575 100 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 60.4 ms