RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 TY1A-LR1P0CX68 440 aa2.77□□□□□ -1.97
snR47snR47 TY1A-MR2P0CX69 440 aa2.77□□□□□ -1.97
snR47snR47 RPP1BP10622 106 aaKnown RBP2.77□□□□□ -1.97
snR47snR47 SEC2P17065 759 aa2.77□□□□□ -1.97
snR47snR47 TY1A-JR2P47099 440 aa2.77□□□□□ -1.97
snR47snR47 TY1A-DR1Q03856 440 aa2.77□□□□□ -1.97
snR47snR47 TY1A-ML1Q04706 440 aaKnown RBP2.77□□□□□ -1.97
snR47snR47 TY1A-BRQ12217 440 aa2.77□□□□□ -1.97
snR47snR47 TY1A-NL2Q12470 440 aa2.77□□□□□ -1.97
snR47snR47 TY1A-GR2Q12485 440 aa2.77□□□□□ -1.97
snR47snR47 SPT16P32558 1035 aaKnown RBP2.76□□□□□ -1.97
snR47snR47 NUD1P32336 851 aa2.75□□□□□ -1.97
snR47snR47 UBP14P38237 781 aaKnown RBP2.75□□□□□ -1.97
snR47snR47 YJR115WP47152 169 aa2.75□□□□□ -1.97
snR47snR47 HST3P53687 447 aa2.75□□□□□ -1.97
snR47snR47 HPF1Q05164 967 aa2.75□□□□□ -1.97
snR47snR47 YLR326WQ06170 240 aaKnown RBP2.75□□□□□ -1.97
snR47snR47 YRR1Q12172 810 aa2.75□□□□□ -1.97
snR47snR47 PUS1Q12211 544 aaKnown RBP2.75□□□□□ -1.97
snR47snR47 PCS60P38137 543 aaKnown RBP RIP-Chip data2.74□□□□□ -1.97not detected
snR47snR47 GAP1P19145 602 aaPredicted RBP2.73□□□□□ -1.97
snR47snR47 YPR204WQ08995 1032 aa2.72□□□□□ -1.97
snR47snR47 TFB4Q12004 338 aa2.72□□□□□ -1.97
snR47snR47 PHM7Q12252 991 aa2.71□□□□□ -1.98
snR47snR47 GCD11P32481 527 aaKnown RBP2.7□□□□□ -1.98
snR47snR47 RAD54P32863 898 aa2.7□□□□□ -1.98
snR47snR47 YIR007WP40566 764 aa2.7□□□□□ -1.98
snR47snR47 OPT2Q06593 877 aa2.7□□□□□ -1.98
snR47snR47 MOD5P07884 428 aa2.69□□□□□ -1.98
snR47snR47 NPL4P33755 580 aa2.69□□□□□ -1.98
snR47snR47 RRN7P40992 514 aa2.69□□□□□ -1.98
snR47snR47 CSC1Q06538 782 aa2.69□□□□□ -1.98
snR47snR47 PAT1P25644 796 aaKnown RBP2.68□□□□□ -1.98
snR47snR47 GLY1P37303 387 aaKnown RBP2.68□□□□□ -1.98
snR47snR47 MSB3P48566 633 aaPredicted RBP2.68□□□□□ -1.98
snR47snR47 PEX21P50091 288 aa2.68□□□□□ -1.98
snR47snR47 TUM1Q08686 304 aaKnown RBP2.67□□□□□ -1.98
snR47snR47 VHR2P40041 505 aa2.66□□□□□ -1.98
snR47snR47 CCT8P47079 568 aaKnown RBP2.66□□□□□ -1.98
snR47snR47 YLR346CQ06139 101 aa2.66□□□□□ -1.98
snR47snR47 TY1A-BLQ12266 440 aa2.65□□□□□ -1.99
snR47snR47 DPH6Q12429 685 aa2.65□□□□□ -1.99
snR47snR47 PTK2P47116 818 aaKnown RBP2.63□□□□□ -1.99
snR47snR47 SCW11P53189 542 aa2.63□□□□□ -1.99
snR47snR47 MDJ1P35191 511 aa2.62□□□□□ -1.99
snR47snR47 YDR090CQ03193 310 aa2.61□□□□□ -1.99
snR47snR47 PUS5Q06244 254 aa2.61□□□□□ -1.99
snR47snR47 PAC1P39946 494 aaKnown RBP2.6□□□□□ -1.99
snR47snR47 NUP85P46673 744 aa2.6□□□□□ -1.99
snR47snR47 MIP1P15801 1254 aa2.59□□□□□ -1.99
snR47snR47 YFL066CP43538 392 aa2.58□□□□□ -2
snR47snR47 UGA3P26370 528 aa2.57□□□□□ -2
snR47snR47 ORC6P38826 435 aa2.57□□□□□ -2
snR47snR47 JJJ3P47138 172 aa2.57□□□□□ -2
snR47snR47 LYS5P50113 272 aa2.57□□□□□ -2
snR47snR47 NSG2P53898 299 aa2.57□□□□□ -2
snR47snR47 AGE1Q04412 482 aa2.57□□□□□ -2
snR47snR47 SRF1Q12516 437 aa2.57□□□□□ -2
snR47snR47 TYW1Q08960 810 aaKnown RBP2.56□□□□□ -2
snR47snR47 CCP1P00431 361 aa2.55□□□□□ -2
snR47snR47 TPD3P31383 635 aa2.55□□□□□ -2
snR47snR47 MVP1P40959 511 aaKnown RBP2.55□□□□□ -2
snR47snR47 ERF2Q06551 359 aa2.55□□□□□ -2
snR47snR47 SBP1P10080 294 aaKnown RBP2.54□□□□□ -2
snR47snR47 KIC1P38692 1080 aa2.54□□□□□ -2
snR47snR47 RTT106P40161 455 aa2.54□□□□□ -2
snR47snR47 ROG3P43602 733 aa2.54□□□□□ -2
snR47snR47 TY1A-MR1Q04215 440 aa2.54□□□□□ -2
snR47snR47 KEX2P13134 814 aa2.53□□□□□ -2
snR47snR47 SYH1Q02875 849 aaKnown RBP2.53□□□□□ -2
snR47snR47 MRT4P33201 236 aaKnown RBP2.52□□□□□ -2.01
snR47snR47 SKN7P38889 622 aa2.52□□□□□ -2.01
snR47snR47 TUB4P53378 473 aa2.52□□□□□ -2.01
snR47snR47 UBP2Q01476 1272 aa2.52□□□□□ -2.01
snR47snR47 YPR053CQ6Q5F3 151 aa2.52□□□□□ -2.01
snR47snR47 IFH1P39520 1085 aa2.51□□□□□ -2.01
snR47snR47 YPR109WQ06104 294 aa2.51□□□□□ -2.01
snR47snR47 AI1P03875 834 aa2.5□□□□□ -2.01
snR47snR47 THI72Q08579 599 aa2.5□□□□□ -2.01
snR47snR47 OSH7P38755 437 aa2.49□□□□□ -2.01
snR47snR47 LSC2P53312 427 aa2.49□□□□□ -2.01
snR47snR47 RGR1P19263 1082 aa2.48□□□□□ -2.01
snR47snR47 YJR098CP47139 656 aa2.48□□□□□ -2.01
snR47snR47 AAD14P42884 376 aa2.47□□□□□ -2.01
snR47snR47 HXT10P43581 546 aa2.47□□□□□ -2.01
snR47snR47 ARG82P07250 355 aa2.46□□□□□ -2.02
snR47snR47 SET1P38827 1080 aaKnown RBP2.46□□□□□ -2.02
snR47snR47 IRC24P40580 263 aa2.46□□□□□ -2.02
snR47snR47 KXD1P53158 218 aa2.46□□□□□ -2.02
snR47snR47 TCB1Q12466 1186 aa2.46□□□□□ -2.02
snR47snR47 RTF1P53064 558 aa2.45□□□□□ -2.02
snR47snR47 PDC1P06169 563 aaKnown RBP2.43□□□□□ -2.02
snR47snR47 NAM8Q00539 523 aaKnown RBP2.42□□□□□ -2.02
snR47snR47 YMR187CQ03236 431 aa2.42□□□□□ -2.02
snR47snR47 TDA6Q06466 467 aa2.42□□□□□ -2.02
snR47snR47 DLD1P32891 587 aa2.41□□□□□ -2.02
snR47snR47 REF2P42073 533 aaPredicted RBP2.41□□□□□ -2.02
snR47snR47 YPL034WQ03083 165 aa2.41□□□□□ -2.02
snR47snR47 KIP2P28743 706 aa2.4□□□□□ -2.03
snR47snR47 YBL086CP38177 466 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 54.5 ms