RNA–Protein interactions for RNA: YPR066W

UBA3, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeastyeast

Gene UBA3, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA3YPR066W BPT1P14772 1559 aa8.37□□□□□ -1.07
UBA3YPR066W FPK1P53739 893 aa8.37□□□□□ -1.07
UBA3YPR066W YPR109WQ06104 294 aa8.37□□□□□ -1.07
UBA3YPR066W CDC73Q06697 393 aa8.37□□□□□ -1.07
UBA3YPR066W PML39Q03760 334 aa8.36□□□□□ -1.07
UBA3YPR066W ESP1Q03018 1630 aa8.36□□□□□ -1.07
UBA3YPR066W HST2P53686 357 aa8.35□□□□□ -1.07
UBA3YPR066W SCJ1P25303 377 aa8.33□□□□□ -1.08
UBA3YPR066W YJL171CP46992 396 aa8.33□□□□□ -1.08
UBA3YPR066W RPP1BP10622 106 aaKnown RBP8.32□□□□□ -1.08
UBA3YPR066W YDL129WQ07555 291 aa8.32□□□□□ -1.08
UBA3YPR066W YBL036CP38197 257 aa8.31□□□□□ -1.08
UBA3YPR066W MID1P41821 548 aa8.31□□□□□ -1.08
UBA3YPR066W YMR196WQ04336 1088 aa8.31□□□□□ -1.08
UBA3YPR066W SUB2Q07478 446 aaKnown RBP8.31□□□□□ -1.08
UBA3YPR066W TFB4Q12004 338 aa8.31□□□□□ -1.08
UBA3YPR066W MMP1Q12372 583 aa8.31□□□□□ -1.08
UBA3YPR066W ESS1P22696 170 aa8.3□□□□□ -1.08
UBA3YPR066W SIT4P20604 311 aa8.29□□□□□ -1.08
UBA3YPR066W SAP30P38429 201 aa8.29□□□□□ -1.08
UBA3YPR066W PKH3Q03306 898 aaPredicted RBP8.29□□□□□ -1.08
UBA3YPR066W SCC2Q04002 1493 aa8.28□□□□□ -1.08
UBA3YPR066W ERG12P07277 443 aa8.28□□□□□ -1.08
UBA3YPR066W TIF1P10081 395 aaKnown RBP8.28□□□□□ -1.08
UBA3YPR066W RAD59Q12223 238 aa8.28□□□□□ -1.08
UBA3YPR066W BMT6Q12291 365 aa8.28□□□□□ -1.08
UBA3YPR066W UFD4P33202 1483 aa8.27□□□□□ -1.09
UBA3YPR066W YJU3P28321 313 aa8.27□□□□□ -1.09
UBA3YPR066W BIO2P32451 375 aa8.27□□□□□ -1.09
UBA3YPR066W PEX29Q03370 554 aa8.27□□□□□ -1.09
UBA3YPR066W TUM1Q08686 304 aaKnown RBP8.27□□□□□ -1.09
UBA3YPR066W YPK9Q12697 1472 aa8.26□□□□□ -1.09
UBA3YPR066W PEX21P50091 288 aa8.26□□□□□ -1.09
UBA3YPR066W RPL34BP40525 121 aaKnown RBP8.25□□□□□ -1.09
UBA3YPR066W YCF1P39109 1515 aaKnown RBP8.24□□□□□ -1.09
UBA3YPR066W SSA1P10591 642 aaKnown RBP8.24□□□□□ -1.09
UBA3YPR066W CSE4P36012 229 aa8.23□□□□□ -1.09
UBA3YPR066W DPL1Q05567 589 aa8.23□□□□□ -1.09
UBA3YPR066W RPO31P04051 1460 aa8.23□□□□□ -1.09
UBA3YPR066W GEF1P37020 779 aa8.22□□□□□ -1.09
UBA3YPR066W YNL108CP53929 270 aa8.22□□□□□ -1.09
UBA3YPR066W MPC54Q08550 464 aa8.22□□□□□ -1.09
UBA3YPR066W SSA4P22202 642 aaKnown RBP8.21□□□□□ -1.1
UBA3YPR066W YPR204WQ08995 1032 aa8.21□□□□□ -1.1
UBA3YPR066W YRR1Q12172 810 aa8.21□□□□□ -1.1
UBA3YPR066W ARG8P18544 423 aa8.2□□□□□ -1.1
UBA3YPR066W RTG2P32608 588 aaKnown RBP8.2□□□□□ -1.1
UBA3YPR066W RSC30P38781 883 aa8.2□□□□□ -1.1
UBA3YPR066W SUP45P12385 437 aaKnown RBP8.19□□□□□ -1.1
UBA3YPR066W CPS1P27614 576 aa8.19□□□□□ -1.1
UBA3YPR066W TTI1P36097 1038 aa8.19□□□□□ -1.1
UBA3YPR066W TY2B-LR1P0C2J3 1770 aa8.18□□□□□ -1.1
UBA3YPR066W TY2B-FP0CX63 1770 aa8.18□□□□□ -1.1
UBA3YPR066W TY2B-GR2P0CX64 1770 aa8.18□□□□□ -1.1
UBA3YPR066W TY2B-CP25384 1770 aa8.18□□□□□ -1.1
UBA3YPR066W TY2B-DR2Q03494 1770 aa8.18□□□□□ -1.1
UBA3YPR066W TY1B-DR1Q03855 1755 aa8.18□□□□□ -1.1
UBA3YPR066W TY2B-DR3Q07791 1770 aaKnown RBP8.18□□□□□ -1.1
UBA3YPR066W TY2B-OR1Q12113 1770 aa8.18□□□□□ -1.1
UBA3YPR066W TY2B-DR1Q12472 1770 aa8.18□□□□□ -1.1
UBA3YPR066W TY2B-OR2Q12501 1770 aa8.18□□□□□ -1.1
UBA3YPR066W SLY41P22215 453 aa8.17□□□□□ -1.1
UBA3YPR066W YML020WQ03722 664 aa8.17□□□□□ -1.1
UBA3YPR066W MYO2P19524 1574 aaKnown RBP8.17□□□□□ -1.1
UBA3YPR066W YNL115CP53925 644 aa8.16□□□□□ -1.1
UBA3YPR066W YDR344CQ05510 147 aa8.16□□□□□ -1.1
UBA3YPR066W ISU2Q12056 156 aa8.16□□□□□ -1.1
UBA3YPR066W ELP4Q02884 456 aaKnown RBP8.15□□□□□ -1.1
UBA3YPR066W DNF1P32660 1571 aa8.14□□□□□ -1.11
UBA3YPR066W YDJ1P25491 409 aaKnown RBP8.14□□□□□ -1.11
UBA3YPR066W SLX8P40072 274 aa8.14□□□□□ -1.11
UBA3YPR066W RTF1P53064 558 aa8.14□□□□□ -1.11
UBA3YPR066W NMA111P53920 997 aa8.14□□□□□ -1.11
UBA3YPR066W LAM6Q08001 693 aa8.14□□□□□ -1.11
UBA3YPR066W TY1B-BRQ12193 1756 aa8.14□□□□□ -1.11
UBA3YPR066W TY1B-GR3Q12316 1755 aa8.14□□□□□ -1.11
UBA3YPR066W TY1B-ORQ92393 1755 aa8.14□□□□□ -1.11
UBA3YPR066W ENO2P00925 437 aaKnown RBP8.13□□□□□ -1.11
UBA3YPR066W ARH1P48360 493 aa8.13□□□□□ -1.11
UBA3YPR066W NOP8Q08287 484 aaPredicted RBP8.13□□□□□ -1.11
UBA3YPR066W CHD1P32657 1468 aa8.13□□□□□ -1.11
UBA3YPR066W MAK16P10962 306 aaPredicted RBP8.12□□□□□ -1.11
UBA3YPR066W SPT5P27692 1063 aaKnown RBP8.12□□□□□ -1.11
UBA3YPR066W HAP5Q02516 242 aa8.12□□□□□ -1.11
UBA3YPR066W ERF2Q06551 359 aa8.12□□□□□ -1.11
UBA3YPR066W NOB1Q08444 459 aaKnown RBP8.12□□□□□ -1.11
UBA3YPR066W CDC25P04821 1589 aa8.11□□□□□ -1.11
UBA3YPR066W ENO1P00924 437 aaKnown RBP8.11□□□□□ -1.11
UBA3YPR066W KEX2P13134 814 aa8.11□□□□□ -1.11
UBA3YPR066W TRM1P15565 570 aaKnown RBP8.1□□□□□ -1.11
UBA3YPR066W PRE3P38624 215 aa8.1□□□□□ -1.11
UBA3YPR066W MRX10Q05648 414 aa8.1□□□□□ -1.11
UBA3YPR066W NUD1P32336 851 aa8.09□□□□□ -1.11
UBA3YPR066W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.09□□□□□ -1.11not detected
UBA3YPR066W TY2B-BQ12491 1770 aa8.08□□□□□ -1.12
UBA3YPR066W TY1B-DR3Q99231 1755 aa8.08□□□□□ -1.12
UBA3YPR066W CHL1P22516 861 aaPredicted RBP8.08□□□□□ -1.12
UBA3YPR066W RIM21P48565 533 aa8.07□□□□□ -1.12
UBA3YPR066W PUS6P53294 404 aa8.07□□□□□ -1.12
UBA3YPR066W TOP2P06786 1428 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 91.5 ms