RNA–Protein interactions for RNA: YPL019C

VTC3, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC3, Length 2,508 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC3	YPL019C	YSP2	Q06681	1438 aa		3.75	□□□□□ -1.81
VTC3	YPL019C	USO1	P25386	1790 aa		3.75	□□□□□ -1.81
VTC3	YPL019C	MRM1	P25270	412 aa		3.75	□□□□□ -1.81
VTC3	YPL019C	BBC1	P47068	1157 aa		3.74	□□□□□ -1.81
VTC3	YPL019C	GEA1	P47102	1408 aa	Predicted RBP	3.74	□□□□□ -1.81
VTC3	YPL019C	YBT1	P32386	1661 aa		3.73	□□□□□ -1.81
VTC3	YPL019C	YMR196W	Q04336	1088 aa		3.73	□□□□□ -1.81
VTC3	YPL019C	SCY1	P53009	804 aa		3.73	□□□□□ -1.81
VTC3	YPL019C	TY1B-NL2	Q99337	1749 aa	Known RBP	3.71	□□□□□ -1.82
VTC3	YPL019C	HAP1	P0CE41	1502 aa		3.7	□□□□□ -1.82
VTC3	YPL019C	VPS29	P38759	282 aa		3.7	□□□□□ -1.82
VTC3	YPL019C	SET1	P38827	1080 aa	Known RBP	3.7	□□□□□ -1.82
VTC3	YPL019C	THI12	P42883	340 aa		3.7	□□□□□ -1.82
VTC3	YPL019C	THI5	P43534	340 aa		3.7	□□□□□ -1.82
VTC3	YPL019C	THI11	P47183	340 aa		3.7	□□□□□ -1.82
VTC3	YPL019C	YPR148C	Q06523	435 aa		3.7	□□□□□ -1.82
VTC3	YPL019C	THI13	Q07748	340 aa		3.7	□□□□□ -1.82
VTC3	YPL019C	IPL1	P38991	367 aa		3.7	□□□□□ -1.82
VTC3	YPL019C	RTG3	P38165	486 aa		3.68	□□□□□ -1.82
VTC3	YPL019C	IML1	P47170	1584 aa		3.67	□□□□□ -1.82
VTC3	YPL019C	SRB8	P25648	1427 aa		3.67	□□□□□ -1.82
VTC3	YPL019C	NUP188	P52593	1655 aa	Known RBP	3.67	□□□□□ -1.82
VTC3	YPL019C	MAK11	P20484	414 aa	Known RBP	3.67	□□□□□ -1.82
VTC3	YPL019C	SLX5	P32828	619 aa	Known RBP	3.66	□□□□□ -1.82
VTC3	YPL019C	YJL171C	P46992	396 aa		3.66	□□□□□ -1.82
VTC3	YPL019C	BUD21	Q08492	214 aa	Predicted RBP	3.66	□□□□□ -1.82
VTC3	YPL019C	VMR1	P38735	1592 aa		3.65	□□□□□ -1.82
VTC3	YPL019C	TYS1	P36421	394 aa	Known RBP	3.65	□□□□□ -1.83
VTC3	YPL019C	VPS70	P47161	811 aa		3.65	□□□□□ -1.83
VTC3	YPL019C	YBL029C-A	Q3E756	94 aa		3.65	□□□□□ -1.83
VTC3	YPL019C	GLN1	P32288	370 aa	Known RBP	3.64	□□□□□ -1.83
VTC3	YPL019C	STS1	P38637	319 aa		3.64	□□□□□ -1.83
VTC3	YPL019C	EDS1	P38073	919 aa		3.63	□□□□□ -1.83
VTC3	YPL019C	COQ8	P27697	501 aa		3.63	□□□□□ -1.83
VTC3	YPL019C	DSF2	P38213	736 aa		3.61	□□□□□ -1.83
VTC3	YPL019C	RPN1	P38764	993 aa	Known RBP	3.61	□□□□□ -1.83
VTC3	YPL019C	DMA2	P53924	522 aa		3.61	□□□□□ -1.83
VTC3	YPL019C	AIR2	Q12476	344 aa	Known RBP	3.61	□□□□□ -1.83
VTC3	YPL019C	PDR5	P33302	1511 aa	Known RBP	3.6	□□□□□ -1.83
VTC3	YPL019C	APP1	P53933	587 aa		3.6	□□□□□ -1.83
VTC3	YPL019C	SPB4	P25808	606 aa	Predicted RBP	3.59	□□□□□ -1.83
VTC3	YPL019C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	3.59	□□□□□ -1.83	not detected
VTC3	YPL019C	DBP1	P24784	617 aa	Known RBP	3.58	□□□□□ -1.84
VTC3	YPL019C	MRX12	P47084	519 aa		3.58	□□□□□ -1.84
VTC3	YPL019C	PBS2	P08018	668 aa		3.57	□□□□□ -1.84
VTC3	YPL019C	CFT1	Q06632	1357 aa	Known RBP	3.57	□□□□□ -1.84
VTC3	YPL019C	BCK1	Q01389	1478 aa		3.57	□□□□□ -1.84
VTC3	YPL019C	RIA1	P53893	1110 aa		3.56	□□□□□ -1.84
VTC3	YPL019C	YMR074C	Q04773	145 aa		3.56	□□□□□ -1.84
VTC3	YPL019C	PDR11	P40550	1411 aa		3.56	□□□□□ -1.84
VTC3	YPL019C	KRE5	P22023	1365 aa		3.56	□□□□□ -1.84
VTC3	YPL019C	YNR029C	P53729	429 aa	Known RBP	3.55	□□□□□ -1.84
VTC3	YPL019C	NOP53	Q12080	455 aa	Known RBP	3.55	□□□□□ -1.84
VTC3	YPL019C	VNX1	P42839	908 aa		3.55	□□□□□ -1.84
VTC3	YPL019C	NUP42	P49686	430 aa	Known RBP	3.55	□□□□□ -1.84
VTC3	YPL019C	PTC3	P34221	468 aa	Known RBP	3.54	□□□□□ -1.84
VTC3	YPL019C	FKH1	P40466	484 aa		3.54	□□□□□ -1.84
VTC3	YPL019C	DIT2	P21595	489 aa		3.54	□□□□□ -1.84
VTC3	YPL019C	YOR238W	Q08634	303 aa		3.54	□□□□□ -1.84
VTC3	YPL019C	ENT1	Q12518	454 aa		3.53	□□□□□ -1.84
VTC3	YPL019C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	3.53	□□□□□ -1.84	not detected
VTC3	YPL019C	PIB1	Q06651	286 aa		3.53	□□□□□ -1.84
VTC3	YPL019C	REF2	P42073	533 aa	Predicted RBP	3.52	□□□□□ -1.85
VTC3	YPL019C	ENV9	Q08651	330 aa		3.52	□□□□□ -1.85
VTC3	YPL019C	YNR021W	P53723	404 aa	Known RBP	3.52	□□□□□ -1.85
VTC3	YPL019C	SPP1	Q03012	353 aa		3.52	□□□□□ -1.85
VTC3	YPL019C	YDR090C	Q03193	310 aa		3.52	□□□□□ -1.85
VTC3	YPL019C	IMH1	Q06704	911 aa	Known RBP	3.52	□□□□□ -1.85
VTC3	YPL019C	GLC3	P32775	704 aa		3.51	□□□□□ -1.85
VTC3	YPL019C	GCN2	P15442	1659 aa		3.51	□□□□□ -1.85
VTC3	YPL019C	KIN1	P13185	1064 aa		3.51	□□□□□ -1.85
VTC3	YPL019C	UBP14	P38237	781 aa	Known RBP	3.51	□□□□□ -1.85
VTC3	YPL019C	IES2	P40154	320 aa		3.51	□□□□□ -1.85
VTC3	YPL019C	MST1	P07236	462 aa		3.5	□□□□□ -1.85
VTC3	YPL019C	VMA1	P17255	1071 aa	Known RBP	3.5	□□□□□ -1.85
VTC3	YPL019C	COX6	P00427	148 aa		3.5	□□□□□ -1.85
VTC3	YPL019C	SOL3	P38858	249 aa		3.5	□□□□□ -1.85
VTC3	YPL019C	MAM3	Q12296	706 aa		3.5	□□□□□ -1.85
VTC3	YPL019C	IKI3	Q06706	1349 aa	Known RBP	3.5	□□□□□ -1.85
VTC3	YPL019C	NUP192	P47054	1683 aa		3.49	□□□□□ -1.85
VTC3	YPL019C	YRF1-2	P40105	1681 aa		3.49	□□□□□ -1.85
VTC3	YPL019C	NST1	P53935	1240 aa		3.49	□□□□□ -1.85
VTC3	YPL019C	CAB1	Q04430	367 aa		3.49	□□□□□ -1.85
VTC3	YPL019C	UBP1	P25037	809 aa		3.48	□□□□□ -1.85
VTC3	YPL019C	PAF1	P38351	445 aa		3.48	□□□□□ -1.85
VTC3	YPL019C	ALD4	P46367	519 aa	Known RBP	3.48	□□□□□ -1.85
VTC3	YPL019C	BMT6	Q12291	365 aa		3.48	□□□□□ -1.85
VTC3	YPL019C	YLR326W	Q06170	240 aa	Known RBP	3.48	□□□□□ -1.85
VTC3	YPL019C	TY3B-I	Q7LHG5	1498 aa	Known RBP	3.47	□□□□□ -1.85
VTC3	YPL019C	RAV1	P47104	1357 aa		3.47	□□□□□ -1.85
VTC3	YPL019C	GUA1	P38625	525 aa	Known RBP	3.47	□□□□□ -1.85
VTC3	YPL019C	YAP5	P40574	245 aa		3.47	□□□□□ -1.85
VTC3	YPL019C	AIM7	Q12156	149 aa		3.47	□□□□□ -1.85
VTC3	YPL019C	RRP5	Q05022	1729 aa	Known RBP	3.47	□□□□□ -1.85
VTC3	YPL019C	PRP45	P28004	379 aa	Predicted RBP	3.47	□□□□□ -1.85
VTC3	YPL019C	VHR2	P40041	505 aa		3.47	□□□□□ -1.85
VTC3	YPL019C	RAD9	P14737	1309 aa		3.46	□□□□□ -1.85
VTC3	YPL019C	NAP1	P25293	417 aa	Known RBP	3.46	□□□□□ -1.85
VTC3	YPL019C	SAM3	Q08986	587 aa		3.46	□□□□□ -1.85
VTC3	YPL019C	TAF5	P38129	798 aa		3.46	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 389.2 ms