RNA–Protein interactions for RNA: YOR290C

SNF2, Transcript of Catalytic subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF2, Length 5,112 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF2YOR290C NOP56Q12460 504 aaKnown RBP RIP-Chip data4.81□□□□□ -1.64not detected
SNF2YOR290C SEC20P28791 383 aa4.81□□□□□ -1.64
SNF2YOR290C ETP1P38748 585 aaKnown RBP4.81□□□□□ -1.64
SNF2YOR290C SUP35P05453 685 aaKnown RBP4.81□□□□□ -1.64
SNF2YOR290C CDC11P32458 415 aa4.81□□□□□ -1.64
SNF2YOR290C CIK1Q01649 594 aa4.8□□□□□ -1.64
SNF2YOR290C UTP13Q05946 817 aaKnown RBP4.8□□□□□ -1.64
SNF2YOR290C IMH1Q06704 911 aaKnown RBP4.8□□□□□ -1.64
SNF2YOR290C RUD3Q12234 484 aaKnown RBP4.8□□□□□ -1.64
SNF2YOR290C PDR15Q04182 1529 aaKnown RBP4.8□□□□□ -1.64
SNF2YOR290C SLD2P34252 453 aa4.79□□□□□ -1.64
SNF2YOR290C RNR4P49723 345 aaKnown RBP4.79□□□□□ -1.64
SNF2YOR290C CDC25P04821 1589 aa4.79□□□□□ -1.64
SNF2YOR290C PIL1P53252 339 aaKnown RBP4.79□□□□□ -1.64
SNF2YOR290C GCN2P15442 1659 aa4.79□□□□□ -1.64
SNF2YOR290C TPM1P17536 199 aaKnown RBP4.79□□□□□ -1.64
SNF2YOR290C HOS4P40480 1083 aa4.79□□□□□ -1.64
SNF2YOR290C CLF1Q12309 687 aaPredicted RBP4.79□□□□□ -1.64
SNF2YOR290C PDR12Q02785 1511 aa4.79□□□□□ -1.64
SNF2YOR290C RRP8P38961 392 aaKnown RBP4.78□□□□□ -1.64
SNF2YOR290C NNF2P53253 936 aa4.78□□□□□ -1.64
SNF2YOR290C SKI3P17883 1432 aaKnown RBP4.78□□□□□ -1.64
SNF2YOR290C ARP5P53946 755 aa4.78□□□□□ -1.64
SNF2YOR290C TY1B-NL2Q99337 1749 aaKnown RBP4.78□□□□□ -1.64
SNF2YOR290C RPN1P38764 993 aaKnown RBP4.77□□□□□ -1.65
SNF2YOR290C BFR1P38934 470 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
SNF2YOR290C MAK21Q12176 1025 aaKnown RBP4.77□□□□□ -1.65
SNF2YOR290C SNQ2P32568 1501 aaKnown RBP4.77□□□□□ -1.65
SNF2YOR290C VAS1P07806 1104 aaKnown RBP4.77□□□□□ -1.65
SNF2YOR290C UTP5Q04177 643 aaKnown RBP4.77□□□□□ -1.65
SNF2YOR290C YMR196WQ04336 1088 aa4.77□□□□□ -1.65
SNF2YOR290C MRX12P47084 519 aa4.76□□□□□ -1.65
SNF2YOR290C PDR10P51533 1564 aa4.76□□□□□ -1.65
SNF2YOR290C KAR2P16474 682 aaKnown RBP4.76□□□□□ -1.65
SNF2YOR290C EAP1P36041 632 aaKnown RBP4.76□□□□□ -1.65
SNF2YOR290C AVT3P36062 692 aa4.76□□□□□ -1.65
SNF2YOR290C ARF3P40994 183 aaRIP-Chip data4.76□□□□□ -1.65 RIP-Chip
SNF2YOR290C VPS13Q07878 3144 aa4.76□□□□□ -1.65
SNF2YOR290C SSA4P22202 642 aaKnown RBP4.76□□□□□ -1.65
SNF2YOR290C SWI6P09959 803 aa4.76□□□□□ -1.65
SNF2YOR290C CEX1Q12453 761 aa4.75□□□□□ -1.65
SNF2YOR290C RSE1Q04693 1361 aaKnown RBP4.75□□□□□ -1.65
SNF2YOR290C PKH1Q03407 766 aa4.75□□□□□ -1.65
SNF2YOR290C FUN30P31380 1131 aa4.75□□□□□ -1.65
SNF2YOR290C YMR124WP39523 943 aaKnown RBP4.75□□□□□ -1.65
SNF2YOR290C VMR1P38735 1592 aa4.75□□□□□ -1.65
SNF2YOR290C SQT1P35184 431 aa4.75□□□□□ -1.65
SNF2YOR290C TOM71P38825 639 aaKnown RBP4.74□□□□□ -1.65
SNF2YOR290C BUD27P43573 796 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
SNF2YOR290C ARP8Q12386 881 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
SNF2YOR290C YTA7P40340 1379 aa4.74□□□□□ -1.65
SNF2YOR290C SNT2P53127 1403 aa4.74□□□□□ -1.65
SNF2YOR290C SKI2P35207 1287 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
SNF2YOR290C UTP9P38882 575 aaKnown RBP4.74□□□□□ -1.65
SNF2YOR290C VHS3Q08438 674 aa4.74□□□□□ -1.65
SNF2YOR290C CLB1P24868 471 aa4.74□□□□□ -1.65
SNF2YOR290C YEL1P34225 687 aa4.74□□□□□ -1.65
SNF2YOR290C SUB1P54000 292 aaKnown RBP4.74□□□□□ -1.65
SNF2YOR290C SWD1P39706 426 aa4.73□□□□□ -1.65
SNF2YOR290C SPR3P41901 512 aa4.73□□□□□ -1.65
SNF2YOR290C SSA2P10592 639 aaKnown RBP4.73□□□□□ -1.65
SNF2YOR290C MFT1P33441 392 aaKnown RBP4.73□□□□□ -1.65
SNF2YOR290C SET2P46995 733 aaKnown RBP4.73□□□□□ -1.65
SNF2YOR290C NOT5Q12514 560 aaPredicted RBP4.73□□□□□ -1.65
SNF2YOR290C ITC1P53125 1264 aa4.72□□□□□ -1.65
SNF2YOR290C RIX1P38883 763 aaPredicted RBP4.72□□□□□ -1.65
SNF2YOR290C SSE1P32589 693 aaKnown RBP4.72□□□□□ -1.65
SNF2YOR290C ESF2P53743 316 aaKnown RBP4.72□□□□□ -1.65
SNF2YOR290C TSR2Q06672 205 aaKnown RBP4.72□□□□□ -1.65
SNF2YOR290C RRT14P40470 206 aa4.71□□□□□ -1.65
SNF2YOR290C OCA1P50946 238 aaPredicted RBP4.71□□□□□ -1.65
SNF2YOR290C SPT16P32558 1035 aaKnown RBP4.71□□□□□ -1.66
SNF2YOR290C SNF7P39929 240 aaKnown RBP4.71□□□□□ -1.66
SNF2YOR290C NOP58Q12499 511 aaKnown RBP4.71□□□□□ -1.66
SNF2YOR290C VMA4P22203 233 aaKnown RBP4.71□□□□□ -1.66
SNF2YOR290C UTP14Q04500 899 aaKnown RBP4.71□□□□□ -1.66
SNF2YOR290C TOP2P06786 1428 aaKnown RBP4.71□□□□□ -1.66
SNF2YOR290C CDC34P14682 295 aa4.71□□□□□ -1.66
SNF2YOR290C PUP2P32379 260 aa4.71□□□□□ -1.66
SNF2YOR290C ESF1Q06344 628 aaKnown RBP4.71□□□□□ -1.66
SNF2YOR290C SEC3P33332 1336 aaKnown RBP4.71□□□□□ -1.66
SNF2YOR290C MYO4P32492 1471 aa4.71□□□□□ -1.66
SNF2YOR290C GDB1Q06625 1536 aa4.7□□□□□ -1.66
SNF2YOR290C ARO1P08566 1588 aaKnown RBP4.7□□□□□ -1.66
SNF2YOR290C SPC110P32380 944 aa4.7□□□□□ -1.66
SNF2YOR290C SPT21P35209 758 aa4.7□□□□□ -1.66
SNF2YOR290C YPP1P46951 817 aa4.7□□□□□ -1.66
SNF2YOR290C TY4A-JP47023 414 aa4.7□□□□□ -1.66
SNF2YOR290C VPS72Q03388 795 aa4.7□□□□□ -1.66
SNF2YOR290C JIP5Q06214 492 aaPredicted RBP4.7□□□□□ -1.66
SNF2YOR290C SFB2P53953 876 aa4.7□□□□□ -1.66
SNF2YOR290C SIP3P38717 1229 aa4.7□□□□□ -1.66
SNF2YOR290C RUP1Q12242 671 aa4.7□□□□□ -1.66
SNF2YOR290C TOP1P04786 769 aa4.69□□□□□ -1.66
SNF2YOR290C RED1P14291 827 aa4.69□□□□□ -1.66
SNF2YOR290C SPB4P25808 606 aaPredicted RBP4.69□□□□□ -1.66
SNF2YOR290C YJU2P28320 278 aaPredicted RBP4.69□□□□□ -1.66
SNF2YOR290C TAN1P53072 289 aaPredicted RBP4.69□□□□□ -1.66
SNF2YOR290C NBL1Q3E7Y6 73 aa4.69□□□□□ -1.66
SNF2YOR290C SRS2P12954 1174 aa4.69□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 44.6 ms