RNA–Protein interactions for RNA: YOR259C

RPT4, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT4YOR259C TRM732Q03496 1420 aa7.76□□□□□ -1.17
RPT4YOR259C IFH1P39520 1085 aa7.76□□□□□ -1.17
RPT4YOR259C ULS1Q08562 1619 aa7.75□□□□□ -1.17
RPT4YOR259C SEC61P32915 480 aa7.75□□□□□ -1.17
RPT4YOR259C PTC4P38089 393 aa7.75□□□□□ -1.17
RPT4YOR259C SOL3P38858 249 aa7.75□□□□□ -1.17
RPT4YOR259C DAN4P47179 1161 aa7.75□□□□□ -1.17
RPT4YOR259C NST1P53935 1240 aa7.75□□□□□ -1.17
RPT4YOR259C STH1P32597 1359 aa7.75□□□□□ -1.17
RPT4YOR259C PDR15Q04182 1529 aaKnown RBP7.74□□□□□ -1.17
RPT4YOR259C RPO21P04050 1733 aaKnown RBP7.74□□□□□ -1.17
RPT4YOR259C YPR148CQ06523 435 aa7.74□□□□□ -1.17
RPT4YOR259C NCR1Q12200 1170 aa7.72□□□□□ -1.17
RPT4YOR259C YGR273CP53329 174 aa7.71□□□□□ -1.18
RPT4YOR259C SNT2P53127 1403 aa7.7□□□□□ -1.18
RPT4YOR259C MET5P47169 1442 aa7.68□□□□□ -1.18
RPT4YOR259C YJL171CP46992 396 aa7.68□□□□□ -1.18
RPT4YOR259C TAF7Q05021 590 aa7.68□□□□□ -1.18
RPT4YOR259C NUP159P40477 1460 aa7.68□□□□□ -1.18
RPT4YOR259C AI4P03878 556 aa7.67□□□□□ -1.18
RPT4YOR259C MPH3P0CE00 602 aa7.67□□□□□ -1.18
RPT4YOR259C TFG1P41895 735 aaPredicted RBP7.67□□□□□ -1.18
RPT4YOR259C YRF1-1P0CX20 1796 aa7.67□□□□□ -1.18
RPT4YOR259C YRF1-5P0CX21 1796 aa7.67□□□□□ -1.18
RPT4YOR259C YRF1-8P0CX22 1796 aa7.67□□□□□ -1.18
RPT4YOR259C ILV3P39522 585 aaKnown RBP7.65□□□□□ -1.18
RPT4YOR259C VPS70P47161 811 aa7.65□□□□□ -1.18
RPT4YOR259C BMT6Q12291 365 aa7.64□□□□□ -1.19
RPT4YOR259C YDL129WQ07555 291 aa7.63□□□□□ -1.19
RPT4YOR259C GEA1P47102 1408 aaPredicted RBP7.63□□□□□ -1.19
RPT4YOR259C GEA2P39993 1459 aaKnown RBP7.63□□□□□ -1.19
RPT4YOR259C IRC20Q06554 1556 aa7.62□□□□□ -1.19
RPT4YOR259C PML39Q03760 334 aa7.61□□□□□ -1.19
RPT4YOR259C TY3B-GQ99315 1547 aa7.6□□□□□ -1.19
RPT4YOR259C YLR326WQ06170 240 aaKnown RBP7.6□□□□□ -1.19
RPT4YOR259C KEX1P09620 729 aa7.59□□□□□ -1.19
RPT4YOR259C UBP14P38237 781 aaKnown RBP7.59□□□□□ -1.19
RPT4YOR259C SAP30P38429 201 aa7.59□□□□□ -1.19
RPT4YOR259C VHR2P40041 505 aa7.59□□□□□ -1.19
RPT4YOR259C YBT1P32386 1661 aa7.59□□□□□ -1.19
RPT4YOR259C SPO14P36126 1683 aa7.58□□□□□ -1.2
RPT4YOR259C VPS15P22219 1454 aa7.58□□□□□ -1.2
RPT4YOR259C RTT106P40161 455 aa7.57□□□□□ -1.2
RPT4YOR259C REF2P42073 533 aaPredicted RBP7.57□□□□□ -1.2
RPT4YOR259C PDR12Q02785 1511 aa7.56□□□□□ -1.2
RPT4YOR259C NOP2P40991 618 aaKnown RBP7.55□□□□□ -1.2
RPT4YOR259C MID1P41821 548 aa7.55□□□□□ -1.2
RPT4YOR259C CKB1P43639 278 aa7.54□□□□□ -1.2
RPT4YOR259C NUP170P38181 1502 aa7.54□□□□□ -1.2
RPT4YOR259C GDB1Q06625 1536 aa7.54□□□□□ -1.2
RPT4YOR259C SLI15P38283 698 aa7.53□□□□□ -1.2
RPT4YOR259C RAD54P32863 898 aa7.52□□□□□ -1.2
RPT4YOR259C YDR090CQ03193 310 aa7.52□□□□□ -1.2
RPT4YOR259C IKI3Q06706 1349 aaKnown RBP7.52□□□□□ -1.21
RPT4YOR259C LTE1P07866 1435 aa7.52□□□□□ -1.21
RPT4YOR259C CAT8P39113 1433 aa7.52□□□□□ -1.21
RPT4YOR259C PCS60P38137 543 aaKnown RBP RIP-Chip data7.52□□□□□ -1.21 RIP-Chip
RPT4YOR259C MET10P39692 1035 aa7.52□□□□□ -1.21
RPT4YOR259C PDR10P51533 1564 aa7.51□□□□□ -1.21
RPT4YOR259C PEX29Q03370 554 aa7.5□□□□□ -1.21
RPT4YOR259C MAK21Q12176 1025 aaKnown RBP7.49□□□□□ -1.21
RPT4YOR259C NUP157P40064 1391 aaKnown RBP7.49□□□□□ -1.21
RPT4YOR259C ARO1P08566 1588 aaKnown RBP7.48□□□□□ -1.21
RPT4YOR259C YDR344CQ05510 147 aa7.48□□□□□ -1.21
RPT4YOR259C MPC54Q08550 464 aa7.48□□□□□ -1.21
RPT4YOR259C KIC1P38692 1080 aa7.47□□□□□ -1.21
RPT4YOR259C COX6P00427 148 aa7.46□□□□□ -1.22
RPT4YOR259C PBS2P08018 668 aa7.46□□□□□ -1.22
RPT4YOR259C PRE3P38624 215 aa7.46□□□□□ -1.22
RPT4YOR259C ARH1P48360 493 aa7.45□□□□□ -1.22
RPT4YOR259C CHL1P22516 861 aaPredicted RBP7.44□□□□□ -1.22
RPT4YOR259C DPL1Q05567 589 aa7.44□□□□□ -1.22
RPT4YOR259C IQG1Q12280 1495 aa7.44□□□□□ -1.22
RPT4YOR259C ELP4Q02884 456 aaKnown RBP7.43□□□□□ -1.22
RPT4YOR259C CDC73Q06697 393 aa7.43□□□□□ -1.22
RPT4YOR259C SSM4P40318 1319 aa7.43□□□□□ -1.22
RPT4YOR259C BNI1P41832 1953 aa7.42□□□□□ -1.22
RPT4YOR259C BUD3P25558 1636 aa7.42□□□□□ -1.22
RPT4YOR259C DSF2P38213 736 aa7.41□□□□□ -1.22
RPT4YOR259C HAP5Q02516 242 aa7.41□□□□□ -1.22
RPT4YOR259C DOP1Q03921 1698 aa7.4□□□□□ -1.23
RPT4YOR259C SEC7P11075 2009 aaKnown RBP7.4□□□□□ -1.23
RPT4YOR259C DRS2P39524 1355 aa7.4□□□□□ -1.23
RPT4YOR259C SRB8P25648 1427 aa7.4□□□□□ -1.23
RPT4YOR259C RPP1BP10622 106 aaKnown RBP7.39□□□□□ -1.23
RPT4YOR259C NMA111P53920 997 aa7.39□□□□□ -1.23
RPT4YOR259C SPB4P25808 606 aaPredicted RBP7.38□□□□□ -1.23
RPT4YOR259C YSP2Q06681 1438 aa7.38□□□□□ -1.23
RPT4YOR259C ORC6P38826 435 aa7.37□□□□□ -1.23
RPT4YOR259C MAM3Q12296 706 aa7.37□□□□□ -1.23
RPT4YOR259C CHC1P22137 1653 aaKnown RBP7.37□□□□□ -1.23
RPT4YOR259C TRM3Q07527 1436 aa7.36□□□□□ -1.23
RPT4YOR259C ISU2Q12056 156 aa7.36□□□□□ -1.23
RPT4YOR259C SPT23P35210 1082 aa7.35□□□□□ -1.23
RPT4YOR259C BNI4P53858 892 aa7.35□□□□□ -1.23
RPT4YOR259C GAP1P19145 602 aaPredicted RBP7.34□□□□□ -1.23
RPT4YOR259C IES2P40154 320 aa7.34□□□□□ -1.23
RPT4YOR259C ITT1Q04638 464 aa7.34□□□□□ -1.23
RPT4YOR259C CSC1Q06538 782 aa7.32□□□□□ -1.24
RPT4YOR259C MMS1Q06211 1407 aa7.31□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 26 ms