RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W TY1A-AP0CX57 440 aa9.12□□□□□ -0.95
SSU72YNL222W TY1A-PR1P0CX58 440 aa9.12□□□□□ -0.95
SSU72YNL222W TY1A-ORP0CX59 440 aa9.12□□□□□ -0.95
SSU72YNL222W TY1A-PR2P0CX60 440 aa9.12□□□□□ -0.95
SSU72YNL222W TY1A-DR5P0CX65 440 aa9.12□□□□□ -0.95
SSU72YNL222W TY1A-ER2P0CX66 440 aa9.12□□□□□ -0.95
SSU72YNL222W TY1A-GR3P0CX67 440 aa9.12□□□□□ -0.95
SSU72YNL222W TY1A-LR1P0CX68 440 aa9.12□□□□□ -0.95
SSU72YNL222W TY1A-MR2P0CX69 440 aa9.12□□□□□ -0.95
SSU72YNL222W GCD11P32481 527 aaKnown RBP9.12□□□□□ -0.95
SSU72YNL222W TY1A-JR2P47099 440 aa9.12□□□□□ -0.95
SSU72YNL222W TY1A-DR1Q03856 440 aa9.12□□□□□ -0.95
SSU72YNL222W TY1A-ML1Q04706 440 aaKnown RBP9.12□□□□□ -0.95
SSU72YNL222W AIM7Q12156 149 aa9.12□□□□□ -0.95
SSU72YNL222W TY1A-BRQ12217 440 aa9.12□□□□□ -0.95
SSU72YNL222W TY1A-NL2Q12470 440 aa9.12□□□□□ -0.95
SSU72YNL222W TY1A-GR2Q12485 440 aa9.12□□□□□ -0.95
SSU72YNL222W ERF2Q06551 359 aa9.11□□□□□ -0.95
SSU72YNL222W SEC2P17065 759 aa9.09□□□□□ -0.95
SSU72YNL222W RPN1P38764 993 aaKnown RBP9.09□□□□□ -0.95
SSU72YNL222W MRF1P30775 413 aaPredicted RBP9.08□□□□□ -0.96
SSU72YNL222W RAS1P01119 309 aa9.07□□□□□ -0.96
SSU72YNL222W AMS1P22855 1083 aa9.07□□□□□ -0.96
SSU72YNL222W FPK1P53739 893 aa9.07□□□□□ -0.96
SSU72YNL222W YMR196WQ04336 1088 aa9.07□□□□□ -0.96
SSU72YNL222W SIT4P20604 311 aa9.06□□□□□ -0.96
SSU72YNL222W KIN1P13185 1064 aa9.04□□□□□ -0.96
SSU72YNL222W SDH2P21801 266 aa9.04□□□□□ -0.96
SSU72YNL222W YEL077CQ3E7X8 1277 aa9.04□□□□□ -0.96
SSU72YNL222W RTF1P53064 558 aa9.02□□□□□ -0.97
SSU72YNL222W YNL115CP53925 644 aa9.02□□□□□ -0.97
SSU72YNL222W RRN7P40992 514 aa9.01□□□□□ -0.97
SSU72YNL222W SRC1Q03707 834 aa9.01□□□□□ -0.97
SSU72YNL222W SCJ1P25303 377 aa9□□□□□ -0.97
SSU72YNL222W HST2P53686 357 aa8.99□□□□□ -0.97
SSU72YNL222W ERG12P07277 443 aa8.98□□□□□ -0.97
SSU72YNL222W SLY41P22215 453 aa8.98□□□□□ -0.97
SSU72YNL222W SPT16P32558 1035 aaKnown RBP8.98□□□□□ -0.97
SSU72YNL222W TYW1Q08960 810 aaKnown RBP8.98□□□□□ -0.97
SSU72YNL222W TUB4P53378 473 aa8.96□□□□□ -0.98
SSU72YNL222W AGE1Q04412 482 aa8.96□□□□□ -0.98
SSU72YNL222W MMP1Q12372 583 aa8.96□□□□□ -0.98
SSU72YNL222W GLN1P32288 370 aaKnown RBP8.95□□□□□ -0.98
SSU72YNL222W PAC1P39946 494 aaKnown RBP8.95□□□□□ -0.98
SSU72YNL222W ESS1P22696 170 aa8.94□□□□□ -0.98
SSU72YNL222W PAT1P25644 796 aaKnown RBP8.94□□□□□ -0.98
SSU72YNL222W KTR1P27810 393 aaKnown RBP8.93□□□□□ -0.98
SSU72YNL222W CSN12P47130 423 aa8.93□□□□□ -0.98
SSU72YNL222W TRK1P12685 1235 aa8.88□□□□□ -0.99
SSU72YNL222W YJU3P28321 313 aa8.88□□□□□ -0.99
SSU72YNL222W CST6P40535 587 aa8.88□□□□□ -0.99
SSU72YNL222W TRM1P15565 570 aaKnown RBP8.87□□□□□ -0.99
SSU72YNL222W PKH3Q03306 898 aaPredicted RBP8.87□□□□□ -0.99
SSU72YNL222W LEO1P38439 464 aa8.86□□□□□ -0.99
SSU72YNL222W GUA1P38625 525 aaKnown RBP8.86□□□□□ -0.99
SSU72YNL222W TBF1Q02457 562 aa8.86□□□□□ -0.99
SSU72YNL222W PUS6P53294 404 aa8.85□□□□□ -0.99
SSU72YNL222W FRK1Q03002 865 aaPredicted RBP8.84□□□□□ -0.99
SSU72YNL222W LAM6Q08001 693 aa8.84□□□□□ -0.99
SSU72YNL222W YDL206WQ12424 762 aa8.83□□□□□ -1
SSU72YNL222W SSA2P10592 639 aaKnown RBP8.82□□□□□ -1
SSU72YNL222W BDP1P46678 594 aa8.82□□□□□ -1
SSU72YNL222W MOD5P07884 428 aa8.8□□□□□ -1
SSU72YNL222W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.8□□□□□ -1not detected
SSU72YNL222W KXD1P53158 218 aa8.8□□□□□ -1
SSU72YNL222W PDC1P06169 563 aaKnown RBP8.79□□□□□ -1
SSU72YNL222W ARG8P18544 423 aa8.79□□□□□ -1
SSU72YNL222W RAD59Q12223 238 aa8.78□□□□□ -1
SSU72YNL222W RSC30P38781 883 aa8.77□□□□□ -1.01
SSU72YNL222W RPA14P50106 137 aa8.77□□□□□ -1.01
SSU72YNL222W ALR1Q08269 859 aa8.76□□□□□ -1.01
SSU72YNL222W AIR1P40507 360 aaKnown RBP8.75□□□□□ -1.01
SSU72YNL222W HXT10P43581 546 aa8.75□□□□□ -1.01
SSU72YNL222W CLA4P48562 842 aa8.75□□□□□ -1.01
SSU72YNL222W RRD1P40454 393 aaKnown RBP8.74□□□□□ -1.01
SSU72YNL222W HPC2Q01448 625 aa8.74□□□□□ -1.01
SSU72YNL222W PUS5Q06244 254 aa8.74□□□□□ -1.01
SSU72YNL222W YPR097WQ06839 1073 aa8.73□□□□□ -1.01
SSU72YNL222W TPD3P31383 635 aa8.72□□□□□ -1.01
SSU72YNL222W TFB3Q03290 321 aa8.71□□□□□ -1.02
SSU72YNL222W HED1Q03937 162 aa8.71□□□□□ -1.02
SSU72YNL222W CDC4P07834 779 aa8.69□□□□□ -1.02
SSU72YNL222W BRL1P38770 471 aa8.68□□□□□ -1.02
SSU72YNL222W BRE2P43132 505 aa8.66□□□□□ -1.02
SSU72YNL222W GCR2Q01722 534 aa8.66□□□□□ -1.02
SSU72YNL222W PKC1P24583 1151 aa8.65□□□□□ -1.02
SSU72YNL222W MAK16P10962 306 aaPredicted RBP8.62□□□□□ -1.03
SSU72YNL222W KIP2P28743 706 aa8.61□□□□□ -1.03
SSU72YNL222W YBL036CP38197 257 aa8.61□□□□□ -1.03
SSU72YNL222W SYH1Q02875 849 aaKnown RBP8.61□□□□□ -1.03
SSU72YNL222W VAC17P25591 423 aa8.58□□□□□ -1.04
SSU72YNL222W IXR1P33417 597 aa8.58□□□□□ -1.04
SSU72YNL222W MET32Q12041 191 aa8.58□□□□□ -1.04
SSU72YNL222W FIG4P42837 879 aa8.57□□□□□ -1.04
SSU72YNL222W CSE4P36012 229 aa8.56□□□□□ -1.04
SSU72YNL222W ITT1Q04638 464 aa8.56□□□□□ -1.04
SSU72YNL222W BIO2P32451 375 aa8.55□□□□□ -1.04
SSU72YNL222W HST3P53687 447 aa8.55□□□□□ -1.04
SSU72YNL222W DMA2P53924 522 aa8.55□□□□□ -1.04
SSU72YNL222W TEC1P18412 486 aa8.54□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms