RNA–Protein interactions for RNA: YNL054W

VAC7, Transcript of Integral vacuolar membrane protein, yeast

Gene VAC7, Length 3,498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAC7	YNL054W	ECM1	P39715	212 aa		4.96	□□□□□ -1.62
VAC7	YNL054W	GRX3	Q03835	250 aa		4.96	□□□□□ -1.62
VAC7	YNL054W	MYO4	P32492	1471 aa		4.96	□□□□□ -1.62
VAC7	YNL054W	PDR15	Q04182	1529 aa	Known RBP	4.96	□□□□□ -1.62
VAC7	YNL054W	RKR1	Q04781	1562 aa		4.96	□□□□□ -1.62
VAC7	YNL054W	TRK1	P12685	1235 aa		4.96	□□□□□ -1.62
VAC7	YNL054W	RKM3	P38222	552 aa		4.96	□□□□□ -1.62
VAC7	YNL054W	RFC1	P38630	861 aa	Known RBP	4.96	□□□□□ -1.62
VAC7	YNL054W	APC11	Q12157	165 aa		4.96	□□□□□ -1.62
VAC7	YNL054W	LSP1	Q12230	341 aa	Known RBP	4.96	□□□□□ -1.62
VAC7	YNL054W	NOP14	Q99207	810 aa	Known RBP	4.96	□□□□□ -1.62
VAC7	YNL054W	RPN1	P38764	993 aa	Known RBP	4.95	□□□□□ -1.62
VAC7	YNL054W	YGL140C	P53120	1219 aa		4.95	□□□□□ -1.62
VAC7	YNL054W	MED8	P38304	223 aa		4.95	□□□□□ -1.62
VAC7	YNL054W	RVS167	P39743	482 aa	Known RBP	4.95	□□□□□ -1.62
VAC7	YNL054W	RSM25	P40496	264 aa		4.95	□□□□□ -1.62
VAC7	YNL054W	YNL011C	P53980	444 aa		4.95	□□□□□ -1.62
VAC7	YNL054W	ECM16	Q04217	1267 aa	Known RBP	4.95	□□□□□ -1.62
VAC7	YNL054W	ETT1	Q08421	412 aa	Known RBP	4.95	□□□□□ -1.62
VAC7	YNL054W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
VAC7	YNL054W	VMS1	Q04311	632 aa	Known RBP	4.95	□□□□□ -1.62
VAC7	YNL054W	YCF1	P39109	1515 aa	Known RBP	4.94	□□□□□ -1.62
VAC7	YNL054W	HSP82	P02829	709 aa	Known RBP	4.94	□□□□□ -1.62
VAC7	YNL054W	BIK1	P11709	440 aa		4.94	□□□□□ -1.62
VAC7	YNL054W	SPE2	P21182	396 aa		4.94	□□□□□ -1.62
VAC7	YNL054W	CHZ1	P40019	153 aa	Predicted RBP	4.94	□□□□□ -1.62
VAC7	YNL054W	VPS20	Q04272	221 aa		4.94	□□□□□ -1.62
VAC7	YNL054W	SAP155	P43612	1002 aa		4.94	□□□□□ -1.62
VAC7	YNL054W	NUP159	P40477	1460 aa		4.94	□□□□□ -1.62
VAC7	YNL054W	YOR1	P53049	1477 aa		4.94	□□□□□ -1.62
VAC7	YNL054W	TLG2	Q08144	397 aa		4.93	□□□□□ -1.62
VAC7	YNL054W	BMS1	Q08965	1183 aa	Known RBP	4.93	□□□□□ -1.62
VAC7	YNL054W	TOP1	P04786	769 aa		4.93	□□□□□ -1.62
VAC7	YNL054W	RPN12	P32496	274 aa		4.93	□□□□□ -1.62
VAC7	YNL054W	ASF1	P32447	279 aa		4.93	□□□□□ -1.62
VAC7	YNL054W	SAP1	P39955	897 aa	Known RBP	4.93	□□□□□ -1.62
VAC7	YNL054W	GIN4	Q12263	1142 aa		4.93	□□□□□ -1.62
VAC7	YNL054W	SCT1	P32784	759 aa		4.92	□□□□□ -1.62
VAC7	YNL054W	SWH1	P35845	1188 aa		4.92	□□□□□ -1.62
VAC7	YNL054W	ESL2	P36168	1195 aa		4.92	□□□□□ -1.62
VAC7	YNL054W	CIN4	P39110	191 aa		4.92	□□□□□ -1.62
VAC7	YNL054W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
VAC7	YNL054W	YIL092W	P40497	633 aa		4.92	□□□□□ -1.62
VAC7	YNL054W	BDP1	P46678	594 aa		4.92	□□□□□ -1.62
VAC7	YNL054W	ENT3	P47160	408 aa		4.92	□□□□□ -1.62
VAC7	YNL054W	UBP10	P53874	792 aa	Predicted RBP	4.92	□□□□□ -1.62
VAC7	YNL054W	IQG1	Q12280	1495 aa		4.92	□□□□□ -1.62
VAC7	YNL054W	MRPL10	P36520	322 aa		4.92	□□□□□ -1.62
VAC7	YNL054W	SIC1	P38634	284 aa		4.92	□□□□□ -1.62
VAC7	YNL054W	MAK21	Q12176	1025 aa	Known RBP	4.92	□□□□□ -1.62
VAC7	YNL054W	MSB4	Q12317	492 aa		4.92	□□□□□ -1.62
VAC7	YNL054W	DLD1	P32891	587 aa		4.91	□□□□□ -1.62
VAC7	YNL054W	RTT107	P38850	1070 aa		4.91	□□□□□ -1.62
VAC7	YNL054W	YMR102C	Q03177	834 aa		4.91	□□□□□ -1.62
VAC7	YNL054W	MDM38	Q08179	573 aa		4.91	□□□□□ -1.62
VAC7	YNL054W	PUS1	Q12211	544 aa	Known RBP	4.91	□□□□□ -1.62
VAC7	YNL054W	ESP1	Q03018	1630 aa		4.91	□□□□□ -1.62
VAC7	YNL054W	TRM3	Q07527	1436 aa		4.91	□□□□□ -1.62
VAC7	YNL054W	MGA2	P40578	1113 aa		4.91	□□□□□ -1.62
VAC7	YNL054W	STU2	P46675	888 aa		4.91	□□□□□ -1.62
VAC7	YNL054W	NPA3	P47122	385 aa		4.91	□□□□□ -1.62
VAC7	YNL054W	KAR2	P16474	682 aa	Known RBP	4.91	□□□□□ -1.62
VAC7	YNL054W	SRC1	Q03707	834 aa		4.91	□□□□□ -1.62
VAC7	YNL054W	VPS41	P38959	992 aa		4.9	□□□□□ -1.62
VAC7	YNL054W	YPK9	Q12697	1472 aa		4.9	□□□□□ -1.63
VAC7	YNL054W	YBR287W	P38355	427 aa		4.9	□□□□□ -1.63
VAC7	YNL054W	SGD1	Q06132	899 aa		4.9	□□□□□ -1.63
VAC7	YNL054W	CTI6	Q08923	506 aa		4.9	□□□□□ -1.63
VAC7	YNL054W	GEA2	P39993	1459 aa	Known RBP	4.9	□□□□□ -1.63
VAC7	YNL054W	NUP145	P49687	1317 aa		4.89	□□□□□ -1.63
VAC7	YNL054W	SIN3	P22579	1536 aa		4.89	□□□□□ -1.63
VAC7	YNL054W	NKP2	Q06162	153 aa		4.89	□□□□□ -1.63
VAC7	YNL054W	NUP170	P38181	1502 aa		4.89	□□□□□ -1.63
VAC7	YNL054W	MDS3	P53094	1487 aa		4.89	□□□□□ -1.63
VAC7	YNL054W	PIL1	P53252	339 aa	Known RBP	4.89	□□□□□ -1.63
VAC7	YNL054W	TRP5	P00931	707 aa	Known RBP	4.88	□□□□□ -1.63
VAC7	YNL054W	VAS1	P07806	1104 aa	Known RBP	4.88	□□□□□ -1.63
VAC7	YNL054W	PET123	P17558	318 aa		4.88	□□□□□ -1.63
VAC7	YNL054W	PUP2	P32379	260 aa		4.88	□□□□□ -1.63
VAC7	YNL054W	CWH41	P53008	833 aa		4.88	□□□□□ -1.63
VAC7	YNL054W	SSL2	Q00578	843 aa		4.88	□□□□□ -1.63
VAC7	YNL054W	TRS33	Q99394	268 aa		4.88	□□□□□ -1.63
VAC7	YNL054W	BRN1	P38170	754 aa		4.88	□□□□□ -1.63
VAC7	YNL054W	CEP3	P40969	608 aa		4.88	□□□□□ -1.63
VAC7	YNL054W	HAP5	Q02516	242 aa		4.88	□□□□□ -1.63
VAC7	YNL054W	MLP2	P40457	1679 aa		4.88	□□□□□ -1.63
VAC7	YNL054W	HXT13	P39924	564 aa		4.88	□□□□□ -1.63
VAC7	YNL054W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
VAC7	YNL054W	RRB1	Q04225	511 aa	Known RBP	4.88	□□□□□ -1.63
VAC7	YNL054W	RBA50	Q04418	439 aa		4.88	□□□□□ -1.63
VAC7	YNL054W	YKL068W-A	Q3E826	78 aa		4.88	□□□□□ -1.63
VAC7	YNL054W	SAP190	P36123	1033 aa		4.87	□□□□□ -1.63
VAC7	YNL054W	ESC1	Q03661	1658 aa	Known RBP	4.87	□□□□□ -1.63
VAC7	YNL054W	RRP43	P25359	394 aa	Predicted RBP	4.87	□□□□□ -1.63
VAC7	YNL054W	HSP104	P31539	908 aa	Known RBP	4.87	□□□□□ -1.63
VAC7	YNL054W	CIR1	P42940	261 aa		4.87	□□□□□ -1.63
VAC7	YNL054W	HST1	P53685	503 aa		4.87	□□□□□ -1.63
VAC7	YNL054W	MRS2	Q01926	470 aa		4.87	□□□□□ -1.63
VAC7	YNL054W	RMD1	Q03441	430 aa		4.87	□□□□□ -1.63
VAC7	YNL054W	RAD50	P12753	1312 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 54.5 ms