RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeastyeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PML39YML107C SPT16P32558 1035 aaKnown RBP7.96□□□□□ -1.14
PML39YML107C GLC3P32775 704 aa7.96□□□□□ -1.14
PML39YML107C ATF2P53296 535 aa7.96□□□□□ -1.14
PML39YML107C YPR109WQ06104 294 aa7.95□□□□□ -1.14
PML39YML107C PSE1P32337 1089 aaKnown RBP7.93□□□□□ -1.14
PML39YML107C RGR1P19263 1082 aa7.92□□□□□ -1.14
PML39YML107C SEC2P17065 759 aa7.91□□□□□ -1.14
PML39YML107C AIM7Q12156 149 aa7.91□□□□□ -1.14
PML39YML107C TY1A-DR4O74302 440 aa7.9□□□□□ -1.14
PML39YML107C TY1A-HP0C2I4 478 aaKnown RBP7.9□□□□□ -1.14
PML39YML107C TY1A-AP0CX57 440 aa7.9□□□□□ -1.14
PML39YML107C TY1A-PR1P0CX58 440 aa7.9□□□□□ -1.14
PML39YML107C TY1A-ORP0CX59 440 aa7.9□□□□□ -1.14
PML39YML107C TY1A-PR2P0CX60 440 aa7.9□□□□□ -1.14
PML39YML107C TY1A-DR5P0CX65 440 aa7.9□□□□□ -1.14
PML39YML107C TY1A-ER2P0CX66 440 aa7.9□□□□□ -1.14
PML39YML107C TY1A-GR3P0CX67 440 aa7.9□□□□□ -1.14
PML39YML107C TY1A-LR1P0CX68 440 aa7.9□□□□□ -1.14
PML39YML107C TY1A-MR2P0CX69 440 aa7.9□□□□□ -1.14
PML39YML107C TY1A-JR2P47099 440 aa7.9□□□□□ -1.14
PML39YML107C TY1A-DR1Q03856 440 aa7.9□□□□□ -1.14
PML39YML107C TY1A-ML1Q04706 440 aaKnown RBP7.9□□□□□ -1.14
PML39YML107C TY1A-BRQ12217 440 aa7.9□□□□□ -1.14
PML39YML107C TY1A-NL2Q12470 440 aa7.9□□□□□ -1.14
PML39YML107C TY1A-GR2Q12485 440 aa7.9□□□□□ -1.14
PML39YML107C RGA1P39083 1007 aa7.89□□□□□ -1.15
PML39YML107C CST6P40535 587 aa7.89□□□□□ -1.15
PML39YML107C KIN1P13185 1064 aa7.88□□□□□ -1.15
PML39YML107C PAT1P25644 796 aaKnown RBP7.88□□□□□ -1.15
PML39YML107C RRN7P40992 514 aa7.87□□□□□ -1.15
PML39YML107C AIR1P40507 360 aaKnown RBP7.86□□□□□ -1.15
PML39YML107C FRK1Q03002 865 aaPredicted RBP7.86□□□□□ -1.15
PML39YML107C TEA1P47988 759 aa7.85□□□□□ -1.15
PML39YML107C CLA4P48562 842 aa7.84□□□□□ -1.15
PML39YML107C LAM6Q08001 693 aa7.84□□□□□ -1.15
PML39YML107C CLB5P30283 435 aa7.83□□□□□ -1.16
PML39YML107C GCR2Q01722 534 aa7.83□□□□□ -1.16
PML39YML107C KEX2P13134 814 aa7.82□□□□□ -1.16
PML39YML107C BRE2P43132 505 aa7.81□□□□□ -1.16
PML39YML107C BDP1P46678 594 aa7.8□□□□□ -1.16
PML39YML107C RGA2Q06407 1009 aa7.8□□□□□ -1.16
PML39YML107C ERF2Q06551 359 aa7.8□□□□□ -1.16
PML39YML107C CDC4P07834 779 aa7.75□□□□□ -1.17
PML39YML107C YMR196WQ04336 1088 aa7.75□□□□□ -1.17
PML39YML107C GAR1P28007 205 aaKnown RBP7.74□□□□□ -1.17
PML39YML107C GBP2P25555 427 aaKnown RBP RIP-Chip data7.73□□□□□ -1.17not detected
PML39YML107C HED1Q03937 162 aa7.73□□□□□ -1.17
PML39YML107C HGH1P48362 394 aaKnown RBP7.71□□□□□ -1.18
PML39YML107C NIS1P53939 407 aa7.71□□□□□ -1.18
PML39YML107C GUA1P38625 525 aaKnown RBP7.7□□□□□ -1.18
PML39YML107C PAC1P39946 494 aaKnown RBP7.7□□□□□ -1.18
PML39YML107C CSN12P47130 423 aa7.7□□□□□ -1.18
PML39YML107C DMA2P53924 522 aa7.7□□□□□ -1.18
PML39YML107C SSA2P10592 639 aaKnown RBP7.69□□□□□ -1.18
PML39YML107C YPL062WQ02781 134 aa7.69□□□□□ -1.18
PML39YML107C TUB4P53378 473 aa7.68□□□□□ -1.18
PML39YML107C FPK1P53739 893 aa7.68□□□□□ -1.18
PML39YML107C YNL115CP53925 644 aa7.67□□□□□ -1.18
PML39YML107C GLN1P32288 370 aaKnown RBP7.65□□□□□ -1.18
PML39YML107C RTF1P53064 558 aa7.65□□□□□ -1.18
PML39YML107C AGE1Q04412 482 aa7.65□□□□□ -1.18
PML39YML107C MOD5P07884 428 aa7.64□□□□□ -1.19
PML39YML107C PUS5Q06244 254 aa7.64□□□□□ -1.19
PML39YML107C TYW1Q08960 810 aaKnown RBP7.64□□□□□ -1.19
PML39YML107C MMP1Q12372 583 aa7.64□□□□□ -1.19
PML39YML107C BRL1P38770 471 aa7.63□□□□□ -1.19
PML39YML107C HST2P53686 357 aa7.63□□□□□ -1.19
PML39YML107C HPC2Q01448 625 aa7.63□□□□□ -1.19
PML39YML107C ASH1P34233 588 aa7.62□□□□□ -1.19
PML39YML107C SIT4P20604 311 aa7.61□□□□□ -1.19
PML39YML107C MET22P32179 357 aa7.61□□□□□ -1.19
PML39YML107C HST3P53687 447 aa7.61□□□□□ -1.19
PML39YML107C SLY41P22215 453 aa7.6□□□□□ -1.19
PML39YML107C SCJ1P25303 377 aa7.6□□□□□ -1.19
PML39YML107C TAF7Q05021 590 aa7.6□□□□□ -1.19
PML39YML107C MET32Q12041 191 aa7.6□□□□□ -1.19
PML39YML107C ESS1P22696 170 aa7.59□□□□□ -1.19
PML39YML107C KXD1P53158 218 aa7.59□□□□□ -1.19
PML39YML107C TFB3Q03290 321 aa7.59□□□□□ -1.19
PML39YML107C KTR1P27810 393 aaKnown RBP7.58□□□□□ -1.2
PML39YML107C PKH3Q03306 898 aaPredicted RBP7.58□□□□□ -1.2
PML39YML107C AFT1P22149 690 aa7.57□□□□□ -1.2
PML39YML107C ENV9Q08651 330 aa7.57□□□□□ -1.2
PML39YML107C YDR444WQ04093 687 aa7.56□□□□□ -1.2
PML39YML107C ARG8P18544 423 aa7.54□□□□□ -1.2
PML39YML107C YJU3P28321 313 aa7.53□□□□□ -1.2
PML39YML107C HXT10P43581 546 aa7.53□□□□□ -1.2
PML39YML107C TBF1Q02457 562 aa7.53□□□□□ -1.2
PML39YML107C RAD59Q12223 238 aa7.51□□□□□ -1.21
PML39YML107C SYH1Q02875 849 aaKnown RBP7.5□□□□□ -1.21
PML39YML107C PDC1P06169 563 aaKnown RBP7.49□□□□□ -1.21
PML39YML107C PKC1P24583 1151 aa7.49□□□□□ -1.21
PML39YML107C TPD3P31383 635 aa7.49□□□□□ -1.21
PML39YML107C YJR115WP47152 169 aa7.49□□□□□ -1.21
PML39YML107C PUS6P53294 404 aa7.49□□□□□ -1.21
PML39YML107C TRM1P15565 570 aaKnown RBP7.48□□□□□ -1.21
PML39YML107C YBL036CP38197 257 aa7.48□□□□□ -1.21
PML39YML107C RRD1P40454 393 aaKnown RBP7.48□□□□□ -1.21
PML39YML107C LCB5Q06147 687 aaKnown RBP7.48□□□□□ -1.21
PML39YML107C KIP2P28743 706 aa7.46□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms