RNA–Protein interactions for RNA: YML075C

HMG1, Transcript of HMG-CoA reductase, yeast

Gene HMG1, Length 3,165 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMG1	YML075C	NHA1	Q99271	985 aa		5.19	□□□□□ -1.58
HMG1	YML075C	YOR093C	Q12275	1648 aa		5.18	□□□□□ -1.58
HMG1	YML075C	CKB1	P43639	278 aa		5.18	□□□□□ -1.58
HMG1	YML075C	NUP188	P52593	1655 aa	Known RBP	5.18	□□□□□ -1.58
HMG1	YML075C	YPR148C	Q06523	435 aa		5.18	□□□□□ -1.58
HMG1	YML075C	BUD21	Q08492	214 aa	Predicted RBP	5.18	□□□□□ -1.58
HMG1	YML075C	SSP1	P38871	571 aa		5.17	□□□□□ -1.58
HMG1	YML075C	MIF2	P35201	549 aa		5.16	□□□□□ -1.58
HMG1	YML075C	SPC42	P36094	363 aa		5.16	□□□□□ -1.58
HMG1	YML075C	BRN1	P38170	754 aa		5.16	□□□□□ -1.58
HMG1	YML075C	GRX3	Q03835	250 aa		5.16	□□□□□ -1.58
HMG1	YML075C	OSW7	P43611	510 aa		5.16	□□□□□ -1.58
HMG1	YML075C	PDR1	P12383	1068 aa		5.14	□□□□□ -1.59
HMG1	YML075C	SSF1	P38789	453 aa	Predicted RBP	5.14	□□□□□ -1.59
HMG1	YML075C	YJR008W	P47085	338 aa		5.14	□□□□□ -1.59
HMG1	YML075C	ASF1	P32447	279 aa		5.14	□□□□□ -1.59
HMG1	YML075C	RTS3	P53289	263 aa		5.13	□□□□□ -1.59
HMG1	YML075C	VMR1	P38735	1592 aa		5.13	□□□□□ -1.59
HMG1	YML075C	TAF13	P11747	167 aa		5.13	□□□□□ -1.59
HMG1	YML075C	ZDS1	P50111	915 aa	Known RBP	5.13	□□□□□ -1.59
HMG1	YML075C	QCR6	P00127	147 aa		5.12	□□□□□ -1.59
HMG1	YML075C	IML1	P47170	1584 aa		5.11	□□□□□ -1.59
HMG1	YML075C	DOS2	P54858	310 aa		5.11	□□□□□ -1.59
HMG1	YML075C	PTP3	P40048	928 aa		5.11	□□□□□ -1.59
HMG1	YML075C	DNF3	Q12674	1656 aa		5.1	□□□□□ -1.59
HMG1	YML075C	GEF1	P37020	779 aa		5.1	□□□□□ -1.59
HMG1	YML075C	PAM1	P37304	830 aa	Known RBP	5.1	□□□□□ -1.59
HMG1	YML075C	KIP3	P53086	805 aa	Known RBP	5.1	□□□□□ -1.59
HMG1	YML075C	SPT2	P06843	333 aa	Predicted RBP	5.09	□□□□□ -1.59
HMG1	YML075C	MRX12	P47084	519 aa		5.09	□□□□□ -1.59
HMG1	YML075C	TLG1	Q03322	224 aa		5.09	□□□□□ -1.59
HMG1	YML075C	BRE1	Q07457	700 aa	Known RBP	5.09	□□□□□ -1.59
HMG1	YML075C	RPS0A	P32905	252 aa	Known RBP	5.08	□□□□□ -1.6
HMG1	YML075C	SLX8	P40072	274 aa		5.08	□□□□□ -1.6
HMG1	YML075C	RAV1	P47104	1357 aa		5.08	□□□□□ -1.6
HMG1	YML075C	SPT16	P32558	1035 aa	Known RBP	5.07	□□□□□ -1.6
HMG1	YML075C	MPP10	P47083	593 aa	Known RBP	5.06	□□□□□ -1.6
HMG1	YML075C	YAP3	P38749	330 aa		5.06	□□□□□ -1.6
HMG1	YML075C	AIM21	P40563	679 aa		5.06	□□□□□ -1.6
HMG1	YML075C	PAF1	P38351	445 aa		5.05	□□□□□ -1.6
HMG1	YML075C	RAD2	P07276	1031 aa		5.04	□□□□□ -1.6
HMG1	YML075C	OCA5	P38738	679 aa		5.04	□□□□□ -1.6
HMG1	YML075C	RTC1	Q08281	1341 aa		5.04	□□□□□ -1.6
HMG1	YML075C	PDR11	P40550	1411 aa		5.04	□□□□□ -1.6
HMG1	YML075C	RPA135	P22138	1203 aa	Known RBP	5.04	□□□□□ -1.6
HMG1	YML075C	IPL1	P38991	367 aa		5.04	□□□□□ -1.6
HMG1	YML075C	MAM3	Q12296	706 aa		5.04	□□□□□ -1.6
HMG1	YML075C	GAL11	P19659	1081 aa		5.03	□□□□□ -1.6
HMG1	YML075C	PMC1	P38929	1173 aa	Predicted RBP	5.03	□□□□□ -1.6
HMG1	YML075C	UBX5	Q06682	500 aa		5.02	□□□□□ -1.61
HMG1	YML075C	TY1B-NL2	Q99337	1749 aa	Known RBP	5.02	□□□□□ -1.61
HMG1	YML075C	MCM1	P11746	286 aa		5.02	□□□□□ -1.61
HMG1	YML075C	NOP7	P53261	605 aa	Known RBP	5.02	□□□□□ -1.61
HMG1	YML075C	TY3B-I	Q7LHG5	1498 aa	Known RBP	5.01	□□□□□ -1.61
HMG1	YML075C	TY4A-J	P47023	414 aa		5.01	□□□□□ -1.61
HMG1	YML075C	SPT7	P35177	1332 aa		5.01	□□□□□ -1.61
HMG1	YML075C	NUP192	P47054	1683 aa		5.01	□□□□□ -1.61
HMG1	YML075C	PSK2	Q08217	1101 aa		5	□□□□□ -1.61
HMG1	YML075C	RNA1	P11745	407 aa	Known RBP	4.99	□□□□□ -1.61
HMG1	YML075C	RPT2	P40327	437 aa	Known RBP	4.99	□□□□□ -1.61
HMG1	YML075C	GIR2	Q03768	265 aa	Predicted RBP	4.99	□□□□□ -1.61
HMG1	YML075C	YMR196W	Q04336	1088 aa		4.99	□□□□□ -1.61
HMG1	YML075C	MPE1	P35728	441 aa	Known RBP	4.99	□□□□□ -1.61
HMG1	YML075C	CEF1	Q03654	590 aa	Predicted RBP	4.99	□□□□□ -1.61
HMG1	YML075C	BCK1	Q01389	1478 aa		4.98	□□□□□ -1.61
HMG1	YML075C	SEC20	P28791	383 aa		4.98	□□□□□ -1.61
HMG1	YML075C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
HMG1	YML075C	NFU1	P32860	256 aa		4.98	□□□□□ -1.61
HMG1	YML075C	SEC9	P40357	651 aa		4.98	□□□□□ -1.61
HMG1	YML075C	SCT1	P32784	759 aa		4.97	□□□□□ -1.61
HMG1	YML075C	HOS4	P40480	1083 aa		4.97	□□□□□ -1.61
HMG1	YML075C	MAK10	Q02197	733 aa		4.97	□□□□□ -1.61
HMG1	YML075C	PKH1	Q03407	766 aa		4.97	□□□□□ -1.61
HMG1	YML075C	CFT1	Q06632	1357 aa	Known RBP	4.97	□□□□□ -1.61
HMG1	YML075C	TYS1	P36421	394 aa	Known RBP	4.96	□□□□□ -1.61
HMG1	YML075C	FAF1	P40546	346 aa	Predicted RBP	4.96	□□□□□ -1.61
HMG1	YML075C	SSA4	P22202	642 aa	Known RBP	4.96	□□□□□ -1.62
HMG1	YML075C	SVL3	Q03088	825 aa	Known RBP	4.96	□□□□□ -1.62
HMG1	YML075C	SPT21	P35209	758 aa		4.95	□□□□□ -1.62
HMG1	YML075C	ESL2	P36168	1195 aa		4.95	□□□□□ -1.62
HMG1	YML075C	NMD3	P38861	518 aa	Known RBP	4.94	□□□□□ -1.62
HMG1	YML075C	FPR3	P38911	411 aa	Known RBP	4.94	□□□□□ -1.62
HMG1	YML075C	ALD4	P46367	519 aa	Known RBP	4.94	□□□□□ -1.62
HMG1	YML075C	HSP82	P02829	709 aa	Known RBP	4.94	□□□□□ -1.62
HMG1	YML075C	MEH1	Q02205	184 aa		4.94	□□□□□ -1.62
HMG1	YML075C	GDE1	Q02979	1223 aa		4.94	□□□□□ -1.62
HMG1	YML075C	SUB2	Q07478	446 aa	Known RBP	4.94	□□□□□ -1.62
HMG1	YML075C	POL5	P39985	1022 aa	Known RBP	4.94	□□□□□ -1.62
HMG1	YML075C	TY1B-A	O13527	1196 aa	Known RBP	4.93	□□□□□ -1.62
HMG1	YML075C	RRN6	P32786	894 aa		4.93	□□□□□ -1.62
HMG1	YML075C	TOM20	P35180	183 aa		4.93	□□□□□ -1.62
HMG1	YML075C	BOI2	P39969	1040 aa		4.93	□□□□□ -1.62
HMG1	YML075C	YAF9	P53930	226 aa		4.93	□□□□□ -1.62
HMG1	YML075C	PLP2	Q12017	286 aa		4.92	□□□□□ -1.62
HMG1	YML075C	ENP1	P38333	483 aa	Known RBP	4.92	□□□□□ -1.62
HMG1	YML075C	YDL121C	Q07541	149 aa		4.92	□□□□□ -1.62
HMG1	YML075C	USO1	P25386	1790 aa		4.92	□□□□□ -1.62
HMG1	YML075C	RAD51	P25454	400 aa		4.92	□□□□□ -1.62
HMG1	YML075C	YFR006W	P43590	535 aa		4.92	□□□□□ -1.62
HMG1	YML075C	TAF1	P46677	1066 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms