RNA–Protein interactions for RNA: YLR178C

TFS1, Transcript of Inhibitor of carboxypeptidase Y (Prc1p), and Ras GAP (Ira2p), yeastyeast

Gene TFS1, Length 660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFS1YLR178C UBP10P53874 792 aaPredicted RBP7.95□□□□□ -1.14
TFS1YLR178C RTG3P38165 486 aa7.93□□□□□ -1.14
TFS1YLR178C SET1P38827 1080 aaKnown RBP7.91□□□□□ -1.14
TFS1YLR178C YGL015CP33199 130 aa7.89□□□□□ -1.15
TFS1YLR178C MAK10Q02197 733 aa7.87□□□□□ -1.15
TFS1YLR178C SSM4P40318 1319 aa7.86□□□□□ -1.15
TFS1YLR178C NUP188P52593 1655 aaKnown RBP7.86□□□□□ -1.15
TFS1YLR178C IPL1P38991 367 aa7.85□□□□□ -1.15
TFS1YLR178C MAK11P20484 414 aaKnown RBP7.84□□□□□ -1.15
TFS1YLR178C SLX5P32828 619 aaKnown RBP7.84□□□□□ -1.15
TFS1YLR178C VPS29P38759 282 aa7.83□□□□□ -1.16
TFS1YLR178C YPR148CQ06523 435 aa7.82□□□□□ -1.16
TFS1YLR178C VPS70P47161 811 aa7.81□□□□□ -1.16
TFS1YLR178C IML1P47170 1584 aa7.8□□□□□ -1.16
TFS1YLR178C TYS1P36421 394 aaKnown RBP7.8□□□□□ -1.16
TFS1YLR178C VMR1P38735 1592 aa7.8□□□□□ -1.16
TFS1YLR178C GCN2P15442 1659 aa7.79□□□□□ -1.16
TFS1YLR178C PAF1P38351 445 aa7.77□□□□□ -1.17
TFS1YLR178C PDR5P33302 1511 aaKnown RBP7.77□□□□□ -1.17
TFS1YLR178C USO1P25386 1790 aa7.76□□□□□ -1.17
TFS1YLR178C SPB4P25808 606 aaPredicted RBP7.76□□□□□ -1.17
TFS1YLR178C HAP1P0CE41 1502 aa7.74□□□□□ -1.17
TFS1YLR178C COQ8P27697 501 aa7.74□□□□□ -1.17
TFS1YLR178C RPN1P38764 993 aaKnown RBP7.73□□□□□ -1.17
TFS1YLR178C YMR1P47147 688 aaKnown RBP RIP-Chip data7.72□□□□□ -1.17not detected
TFS1YLR178C YMR196WQ04336 1088 aa7.72□□□□□ -1.17
TFS1YLR178C TY1B-NL2Q99337 1749 aaKnown RBP7.72□□□□□ -1.17
TFS1YLR178C NOP7P53261 605 aaKnown RBP7.71□□□□□ -1.18
TFS1YLR178C STS1P38637 319 aa7.7□□□□□ -1.18
TFS1YLR178C MRX12P47084 519 aa7.7□□□□□ -1.18
TFS1YLR178C DBP1P24784 617 aaKnown RBP7.68□□□□□ -1.18
TFS1YLR178C THI12P42883 340 aa7.67□□□□□ -1.18
TFS1YLR178C THI5P43534 340 aa7.67□□□□□ -1.18
TFS1YLR178C THI11P47183 340 aa7.67□□□□□ -1.18
TFS1YLR178C THI13Q07748 340 aa7.67□□□□□ -1.18
TFS1YLR178C NOP53Q12080 455 aaKnown RBP7.67□□□□□ -1.18
TFS1YLR178C PDR11P40550 1411 aa7.67□□□□□ -1.18
TFS1YLR178C EDS1P38073 919 aa7.65□□□□□ -1.18
TFS1YLR178C RAV1P47104 1357 aa7.65□□□□□ -1.18
TFS1YLR178C KRE5P22023 1365 aa7.64□□□□□ -1.19
TFS1YLR178C RIA1P53893 1110 aa7.64□□□□□ -1.19
TFS1YLR178C YOR238WQ08634 303 aa7.64□□□□□ -1.19
TFS1YLR178C PBS2P08018 668 aa7.63□□□□□ -1.19
TFS1YLR178C DSF2P38213 736 aa7.63□□□□□ -1.19
TFS1YLR178C TIF4632P39936 914 aaKnown RBP7.62□□□□□ -1.19
TFS1YLR178C RTC1Q08281 1341 aa7.6□□□□□ -1.19
TFS1YLR178C NAP1P25293 417 aaKnown RBP7.6□□□□□ -1.19
TFS1YLR178C BCK1Q01389 1478 aa7.6□□□□□ -1.19
TFS1YLR178C CAB1Q04430 367 aa7.59□□□□□ -1.19
TFS1YLR178C NSR1P27476 414 aaKnown RBP RIP-Chip data7.58□□□□□ -1.2not detected
TFS1YLR178C TGL3P40308 642 aa7.57□□□□□ -1.2
TFS1YLR178C REF2P42073 533 aaPredicted RBP7.57□□□□□ -1.2
TFS1YLR178C CFT1Q06632 1357 aaKnown RBP7.57□□□□□ -1.2
TFS1YLR178C RAD9P14737 1309 aa7.56□□□□□ -1.2
TFS1YLR178C PTC3P34221 468 aaKnown RBP7.56□□□□□ -1.2
TFS1YLR178C YAP5P40574 245 aa7.56□□□□□ -1.2
TFS1YLR178C ALD4P46367 519 aaKnown RBP7.56□□□□□ -1.2
TFS1YLR178C YNR029CP53729 429 aaKnown RBP7.56□□□□□ -1.2
TFS1YLR178C DMA2P53924 522 aa7.56□□□□□ -1.2
TFS1YLR178C PIB1Q06651 286 aa7.56□□□□□ -1.2
TFS1YLR178C NUP192P47054 1683 aa7.55□□□□□ -1.2
TFS1YLR178C ESL2P36168 1195 aa7.54□□□□□ -1.2
TFS1YLR178C TAF5P38129 798 aa7.54□□□□□ -1.2
TFS1YLR178C MAM3Q12296 706 aa7.52□□□□□ -1.21
TFS1YLR178C YNR021WP53723 404 aaKnown RBP7.51□□□□□ -1.21
TFS1YLR178C VMA1P17255 1071 aaKnown RBP7.5□□□□□ -1.21
TFS1YLR178C TAF8Q03750 510 aa7.5□□□□□ -1.21
TFS1YLR178C IES2P40154 320 aa7.49□□□□□ -1.21
TFS1YLR178C MAK21Q12176 1025 aaKnown RBP7.47□□□□□ -1.21
TFS1YLR178C COX6P00427 148 aa7.46□□□□□ -1.22
TFS1YLR178C KIN1P13185 1064 aa7.46□□□□□ -1.22
TFS1YLR178C DIT2P21595 489 aa7.46□□□□□ -1.22
TFS1YLR178C NUP42P49686 430 aaKnown RBP7.46□□□□□ -1.22
TFS1YLR178C TY3B-IQ7LHG5 1498 aaKnown RBP7.46□□□□□ -1.22
TFS1YLR178C GLC3P32775 704 aa7.45□□□□□ -1.22
TFS1YLR178C KIP3P53086 805 aaKnown RBP7.44□□□□□ -1.22
TFS1YLR178C RCM1P53972 490 aa7.44□□□□□ -1.22
TFS1YLR178C SCT1P32784 759 aa7.43□□□□□ -1.22
TFS1YLR178C ATH1P48016 1211 aa7.43□□□□□ -1.22
TFS1YLR178C ORC1P54784 914 aaPredicted RBP7.43□□□□□ -1.22
TFS1YLR178C GRE2Q12068 342 aaKnown RBP7.43□□□□□ -1.22
TFS1YLR178C SPE2P21182 396 aa7.42□□□□□ -1.22
TFS1YLR178C GUT1P32190 709 aa7.42□□□□□ -1.22
TFS1YLR178C APP1P53933 587 aa7.42□□□□□ -1.22
TFS1YLR178C AIM7Q12156 149 aa7.42□□□□□ -1.22
TFS1YLR178C CPS1P27614 576 aa7.41□□□□□ -1.22
TFS1YLR178C UBP14P38237 781 aaKnown RBP7.41□□□□□ -1.22
TFS1YLR178C VHR2P40041 505 aa7.41□□□□□ -1.22
TFS1YLR178C SAM3Q08986 587 aa7.41□□□□□ -1.22
TFS1YLR178C MST1P07236 462 aa7.4□□□□□ -1.22
TFS1YLR178C YDR090CQ03193 310 aa7.39□□□□□ -1.23
TFS1YLR178C PRP45P28004 379 aaPredicted RBP7.38□□□□□ -1.23
TFS1YLR178C ENT1Q12518 454 aa7.38□□□□□ -1.23
TFS1YLR178C PPH3P32345 308 aa7.37□□□□□ -1.23
TFS1YLR178C YLR326WQ06170 240 aaKnown RBP7.37□□□□□ -1.23
TFS1YLR178C GYP5Q12344 894 aa7.37□□□□□ -1.23
TFS1YLR178C CHZ1P40019 153 aaPredicted RBP7.36□□□□□ -1.23
TFS1YLR178C YGR273CP53329 174 aa7.36□□□□□ -1.23
TFS1YLR178C ATF2P53296 535 aa7.35□□□□□ -1.23
TFS1YLR178C YLR419WQ06698 1435 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms