RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C STR2P47164 639 aa7.09□□□□□ -1.27
YPT52YKR014C LEO1P38439 464 aa7.08□□□□□ -1.28
YPT52YKR014C BUD20Q08004 166 aaPredicted RBP7.08□□□□□ -1.28
YPT52YKR014C KIN1P13185 1064 aa7.07□□□□□ -1.28
YPT52YKR014C NIS1P53939 407 aa7.07□□□□□ -1.28
YPT52YKR014C PAT1P25644 796 aaKnown RBP7.06□□□□□ -1.28
YPT52YKR014C RTF1P53064 558 aa7.06□□□□□ -1.28
YPT52YKR014C KEX2P13134 814 aa7.05□□□□□ -1.28
YPT52YKR014C FPK1P53739 893 aa7.05□□□□□ -1.28
YPT52YKR014C YNL115CP53925 644 aa7.05□□□□□ -1.28
YPT52YKR014C SIT4P20604 311 aa7.04□□□□□ -1.28
YPT52YKR014C MRF1P30775 413 aaPredicted RBP7.04□□□□□ -1.28
YPT52YKR014C SPT16P32558 1035 aaKnown RBP7.03□□□□□ -1.28
YPT52YKR014C GLN1P32288 370 aaKnown RBP7.02□□□□□ -1.29
YPT52YKR014C HST2P53686 357 aa7.01□□□□□ -1.29
YPT52YKR014C MMP1Q12372 583 aa7.01□□□□□ -1.29
YPT52YKR014C SLY41P22215 453 aa7□□□□□ -1.29
YPT52YKR014C CSN12P47130 423 aa7□□□□□ -1.29
YPT52YKR014C ERF2Q06551 359 aa6.99□□□□□ -1.29
YPT52YKR014C TY1A-DR4O74302 440 aa6.98□□□□□ -1.29
YPT52YKR014C ERG12P07277 443 aa6.98□□□□□ -1.29
YPT52YKR014C TY1A-HP0C2I4 478 aaKnown RBP6.98□□□□□ -1.29
YPT52YKR014C TY1A-AP0CX57 440 aa6.98□□□□□ -1.29
YPT52YKR014C TY1A-PR1P0CX58 440 aa6.98□□□□□ -1.29
YPT52YKR014C TY1A-ORP0CX59 440 aa6.98□□□□□ -1.29
YPT52YKR014C TY1A-PR2P0CX60 440 aa6.98□□□□□ -1.29
YPT52YKR014C TY1A-DR5P0CX65 440 aa6.98□□□□□ -1.29
YPT52YKR014C TY1A-ER2P0CX66 440 aa6.98□□□□□ -1.29
YPT52YKR014C TY1A-GR3P0CX67 440 aa6.98□□□□□ -1.29
YPT52YKR014C TY1A-LR1P0CX68 440 aa6.98□□□□□ -1.29
YPT52YKR014C TY1A-MR2P0CX69 440 aa6.98□□□□□ -1.29
YPT52YKR014C SSA2P10592 639 aaKnown RBP6.98□□□□□ -1.29
YPT52YKR014C SEC2P17065 759 aa6.98□□□□□ -1.29
YPT52YKR014C RRN7P40992 514 aa6.98□□□□□ -1.29
YPT52YKR014C TY1A-JR2P47099 440 aa6.98□□□□□ -1.29
YPT52YKR014C TY1A-DR1Q03856 440 aa6.98□□□□□ -1.29
YPT52YKR014C TY1A-ML1Q04706 440 aaKnown RBP6.98□□□□□ -1.29
YPT52YKR014C TY1A-BRQ12217 440 aa6.98□□□□□ -1.29
YPT52YKR014C TY1A-NL2Q12470 440 aa6.98□□□□□ -1.29
YPT52YKR014C TY1A-GR2Q12485 440 aa6.98□□□□□ -1.29
YPT52YKR014C AMS1P22855 1083 aa6.97□□□□□ -1.29
YPT52YKR014C YEL077CQ3E7X8 1277 aa6.96□□□□□ -1.3
YPT52YKR014C SCJ1P25303 377 aa6.95□□□□□ -1.3
YPT52YKR014C TBF1Q02457 562 aa6.95□□□□□ -1.3
YPT52YKR014C TYW1Q08960 810 aaKnown RBP6.95□□□□□ -1.3
YPT52YKR014C SDH2P21801 266 aa6.94□□□□□ -1.3
YPT52YKR014C TUB4P53378 473 aa6.94□□□□□ -1.3
YPT52YKR014C ESS1P22696 170 aa6.93□□□□□ -1.3
YPT52YKR014C PUS6P53294 404 aa6.93□□□□□ -1.3
YPT52YKR014C GUA1P38625 525 aaKnown RBP6.91□□□□□ -1.3
YPT52YKR014C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
YPT52YKR014C HGH1P48362 394 aaKnown RBP6.91□□□□□ -1.3
YPT52YKR014C PKH3Q03306 898 aaPredicted RBP6.91□□□□□ -1.3
YPT52YKR014C TRK1P12685 1235 aa6.9□□□□□ -1.3
YPT52YKR014C KXD1P53158 218 aa6.9□□□□□ -1.3
YPT52YKR014C LAM6Q08001 693 aa6.9□□□□□ -1.3
YPT52YKR014C KTR1P27810 393 aaKnown RBP6.89□□□□□ -1.31
YPT52YKR014C AGE1Q04412 482 aa6.89□□□□□ -1.31
YPT52YKR014C TRM1P15565 570 aaKnown RBP6.88□□□□□ -1.31
YPT52YKR014C ARG8P18544 423 aa6.88□□□□□ -1.31
YPT52YKR014C PAC1P39946 494 aaKnown RBP6.88□□□□□ -1.31
YPT52YKR014C HPC2Q01448 625 aa6.88□□□□□ -1.31
YPT52YKR014C YJU3P28321 313 aa6.87□□□□□ -1.31
YPT52YKR014C BRL1P38770 471 aa6.87□□□□□ -1.31
YPT52YKR014C ALR1Q08269 859 aa6.87□□□□□ -1.31
YPT52YKR014C RPA14P50106 137 aa6.85□□□□□ -1.31
YPT52YKR014C YDL206WQ12424 762 aa6.85□□□□□ -1.31
YPT52YKR014C RGA1P39083 1007 aa6.84□□□□□ -1.31
YPT52YKR014C RAD59Q12223 238 aa6.84□□□□□ -1.31
YPT52YKR014C FRK1Q03002 865 aaPredicted RBP6.83□□□□□ -1.32
YPT52YKR014C HXT10P43581 546 aa6.82□□□□□ -1.32
YPT52YKR014C BDP1P46678 594 aa6.82□□□□□ -1.32
YPT52YKR014C RGA2Q06407 1009 aa6.82□□□□□ -1.32
YPT52YKR014C YPR097WQ06839 1073 aa6.82□□□□□ -1.32
YPT52YKR014C RSC30P38781 883 aa6.81□□□□□ -1.32
YPT52YKR014C CST6P40535 587 aa6.81□□□□□ -1.32
YPT52YKR014C PDC1P06169 563 aaKnown RBP6.8□□□□□ -1.32
YPT52YKR014C MOD5P07884 428 aa6.8□□□□□ -1.32
YPT52YKR014C TPD3P31383 635 aa6.8□□□□□ -1.32
YPT52YKR014C TFB3Q03290 321 aa6.8□□□□□ -1.32
YPT52YKR014C RRD1P40454 393 aaKnown RBP6.78□□□□□ -1.32
YPT52YKR014C CSE4P36012 229 aa6.77□□□□□ -1.33
YPT52YKR014C YBL036CP38197 257 aa6.76□□□□□ -1.33
YPT52YKR014C KIP2P28743 706 aa6.75□□□□□ -1.33
YPT52YKR014C SYH1Q02875 849 aaKnown RBP6.75□□□□□ -1.33
YPT52YKR014C HED1Q03937 162 aa6.75□□□□□ -1.33
YPT52YKR014C PUS5Q06244 254 aa6.74□□□□□ -1.33
YPT52YKR014C MAK16P10962 306 aaPredicted RBP6.72□□□□□ -1.33
YPT52YKR014C AIR1P40507 360 aaKnown RBP6.72□□□□□ -1.33
YPT52YKR014C CLA4P48562 842 aa6.72□□□□□ -1.33
YPT52YKR014C PKC1P24583 1151 aa6.71□□□□□ -1.34
YPT52YKR014C IXR1P33417 597 aa6.71□□□□□ -1.34
YPT52YKR014C SPT5P27692 1063 aaKnown RBP6.7□□□□□ -1.34
YPT52YKR014C DMA2P53924 522 aa6.7□□□□□ -1.34
YPT52YKR014C CDC4P07834 779 aa6.69□□□□□ -1.34
YPT52YKR014C NAF1P53919 492 aaKnown RBP6.69□□□□□ -1.34
YPT52YKR014C VAC17P25591 423 aa6.68□□□□□ -1.34
YPT52YKR014C TEC1P18412 486 aa6.67□□□□□ -1.34
YPT52YKR014C YJL007CP47080 104 aa6.67□□□□□ -1.34
YPT52YKR014C BRE2P43132 505 aa6.66□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms