RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A SPT16P32558 1035 aaKnown RBP7.14□□□□□ -1.27
SFT1YKL006C-A NIS1P53939 407 aa7.14□□□□□ -1.27
SFT1YKL006C-A PAT1P25644 796 aaKnown RBP7.13□□□□□ -1.27
SFT1YKL006C-A ERF2Q06551 359 aa7.13□□□□□ -1.27
SFT1YKL006C-A SEC2P17065 759 aa7.12□□□□□ -1.27
SFT1YKL006C-A TY1A-DR4O74302 440 aa7.11□□□□□ -1.27
SFT1YKL006C-A TY1A-HP0C2I4 478 aaKnown RBP7.11□□□□□ -1.27
SFT1YKL006C-A TY1A-AP0CX57 440 aa7.11□□□□□ -1.27
SFT1YKL006C-A TY1A-PR1P0CX58 440 aa7.11□□□□□ -1.27
SFT1YKL006C-A TY1A-ORP0CX59 440 aa7.11□□□□□ -1.27
SFT1YKL006C-A TY1A-PR2P0CX60 440 aa7.11□□□□□ -1.27
SFT1YKL006C-A TY1A-DR5P0CX65 440 aa7.11□□□□□ -1.27
SFT1YKL006C-A TY1A-ER2P0CX66 440 aa7.11□□□□□ -1.27
SFT1YKL006C-A TY1A-GR3P0CX67 440 aa7.11□□□□□ -1.27
SFT1YKL006C-A TY1A-LR1P0CX68 440 aa7.11□□□□□ -1.27
SFT1YKL006C-A TY1A-MR2P0CX69 440 aa7.11□□□□□ -1.27
SFT1YKL006C-A TY1A-JR2P47099 440 aa7.11□□□□□ -1.27
SFT1YKL006C-A FPK1P53739 893 aa7.11□□□□□ -1.27
SFT1YKL006C-A YNL115CP53925 644 aa7.11□□□□□ -1.27
SFT1YKL006C-A TY1A-DR1Q03856 440 aa7.11□□□□□ -1.27
SFT1YKL006C-A TY1A-ML1Q04706 440 aaKnown RBP7.11□□□□□ -1.27
SFT1YKL006C-A TY1A-BRQ12217 440 aa7.11□□□□□ -1.27
SFT1YKL006C-A TY1A-NL2Q12470 440 aa7.11□□□□□ -1.27
SFT1YKL006C-A TY1A-GR2Q12485 440 aa7.11□□□□□ -1.27
SFT1YKL006C-A RPN1P38764 993 aaKnown RBP7.1□□□□□ -1.27
SFT1YKL006C-A RRN7P40992 514 aa7.1□□□□□ -1.27
SFT1YKL006C-A AIM7Q12156 149 aa7.1□□□□□ -1.27
SFT1YKL006C-A ERG12P07277 443 aa7.09□□□□□ -1.27
SFT1YKL006C-A SIT4P20604 311 aa7.09□□□□□ -1.27
SFT1YKL006C-A SLY41P22215 453 aa7.08□□□□□ -1.28
SFT1YKL006C-A RTF1P53064 558 aa7.08□□□□□ -1.28
SFT1YKL006C-A YEL077CQ3E7X8 1277 aa7.07□□□□□ -1.28
SFT1YKL006C-A RAS1P01119 309 aa7.06□□□□□ -1.28
SFT1YKL006C-A SCJ1P25303 377 aa7.05□□□□□ -1.28
SFT1YKL006C-A MMP1Q12372 583 aa7.05□□□□□ -1.28
SFT1YKL006C-A KIN1P13185 1064 aa7.04□□□□□ -1.28
SFT1YKL006C-A SDH2P21801 266 aa7.04□□□□□ -1.28
SFT1YKL006C-A AMS1P22855 1083 aa7.04□□□□□ -1.28
SFT1YKL006C-A GLN1P32288 370 aaKnown RBP7.04□□□□□ -1.28
SFT1YKL006C-A TUB4P53378 473 aa7.04□□□□□ -1.28
SFT1YKL006C-A HST2P53686 357 aa7.03□□□□□ -1.28
SFT1YKL006C-A TYW1Q08960 810 aaKnown RBP7.03□□□□□ -1.28
SFT1YKL006C-A CSN12P47130 423 aa7.02□□□□□ -1.29
SFT1YKL006C-A ESS1P22696 170 aa7□□□□□ -1.29
SFT1YKL006C-A PAC1P39946 494 aaKnown RBP7□□□□□ -1.29
SFT1YKL006C-A PUS6P53294 404 aa6.99□□□□□ -1.29
SFT1YKL006C-A TBF1Q02457 562 aa6.99□□□□□ -1.29
SFT1YKL006C-A FRK1Q03002 865 aaPredicted RBP6.99□□□□□ -1.29
SFT1YKL006C-A AGE1Q04412 482 aa6.99□□□□□ -1.29
SFT1YKL006C-A CST6P40535 587 aa6.96□□□□□ -1.3
SFT1YKL006C-A KXD1P53158 218 aa6.96□□□□□ -1.3
SFT1YKL006C-A BDP1P46678 594 aa6.95□□□□□ -1.3
SFT1YKL006C-A PKH3Q03306 898 aaPredicted RBP6.95□□□□□ -1.3
SFT1YKL006C-A TRM1P15565 570 aaKnown RBP6.94□□□□□ -1.3
SFT1YKL006C-A KTR1P27810 393 aaKnown RBP6.94□□□□□ -1.3
SFT1YKL006C-A YJU3P28321 313 aa6.94□□□□□ -1.3
SFT1YKL006C-A LAM6Q08001 693 aa6.93□□□□□ -1.3
SFT1YKL006C-A SSA2P10592 639 aaKnown RBP6.92□□□□□ -1.3
SFT1YKL006C-A ARG8P18544 423 aa6.92□□□□□ -1.3
SFT1YKL006C-A BUB1P41695 1021 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3not detected
SFT1YKL006C-A YDL206WQ12424 762 aa6.92□□□□□ -1.3
SFT1YKL006C-A GUA1P38625 525 aaKnown RBP6.91□□□□□ -1.3
SFT1YKL006C-A ALR1Q08269 859 aa6.91□□□□□ -1.3
SFT1YKL006C-A HXT10P43581 546 aa6.9□□□□□ -1.3
SFT1YKL006C-A MOD5P07884 428 aa6.89□□□□□ -1.31
SFT1YKL006C-A RPA14P50106 137 aa6.89□□□□□ -1.31
SFT1YKL006C-A PUS5Q06244 254 aa6.89□□□□□ -1.31
SFT1YKL006C-A PDC1P06169 563 aaKnown RBP6.88□□□□□ -1.31
SFT1YKL006C-A LEO1P38439 464 aa6.87□□□□□ -1.31
SFT1YKL006C-A YPR097WQ06839 1073 aa6.87□□□□□ -1.31
SFT1YKL006C-A CLA4P48562 842 aa6.86□□□□□ -1.31
SFT1YKL006C-A RAD59Q12223 238 aa6.86□□□□□ -1.31
SFT1YKL006C-A TRK1P12685 1235 aa6.85□□□□□ -1.31
SFT1YKL006C-A RSC30P38781 883 aa6.85□□□□□ -1.31
SFT1YKL006C-A SRC1Q03707 834 aa6.85□□□□□ -1.31
SFT1YKL006C-A HED1Q03937 162 aa6.85□□□□□ -1.31
SFT1YKL006C-A AIR1P40507 360 aaKnown RBP6.84□□□□□ -1.31
SFT1YKL006C-A KIP2P28743 706 aa6.83□□□□□ -1.32
SFT1YKL006C-A TPD3P31383 635 aa6.83□□□□□ -1.32
SFT1YKL006C-A RRD1P40454 393 aaKnown RBP6.83□□□□□ -1.32
SFT1YKL006C-A BRL1P38770 471 aa6.81□□□□□ -1.32
SFT1YKL006C-A HPC2Q01448 625 aa6.81□□□□□ -1.32
SFT1YKL006C-A SYH1Q02875 849 aaKnown RBP6.81□□□□□ -1.32
SFT1YKL006C-A CDC4P07834 779 aa6.8□□□□□ -1.32
SFT1YKL006C-A IXR1P33417 597 aa6.79□□□□□ -1.32
SFT1YKL006C-A TFB3Q03290 321 aa6.78□□□□□ -1.32
SFT1YKL006C-A HST3P53687 447 aa6.76□□□□□ -1.33
SFT1YKL006C-A GCR2Q01722 534 aa6.76□□□□□ -1.33
SFT1YKL006C-A ASH1P34233 588 aa6.75□□□□□ -1.33
SFT1YKL006C-A YBL036CP38197 257 aa6.75□□□□□ -1.33
SFT1YKL006C-A HGH1P48362 394 aaKnown RBP6.75□□□□□ -1.33
SFT1YKL006C-A MET32Q12041 191 aa6.74□□□□□ -1.33
SFT1YKL006C-A PKC1P24583 1151 aa6.73□□□□□ -1.33
SFT1YKL006C-A VAC17P25591 423 aa6.73□□□□□ -1.33
SFT1YKL006C-A MAK16P10962 306 aaPredicted RBP6.72□□□□□ -1.33
SFT1YKL006C-A CSE4P36012 229 aa6.72□□□□□ -1.33
SFT1YKL006C-A BRE2P43132 505 aa6.71□□□□□ -1.34
SFT1YKL006C-A AFT1P22149 690 aa6.7□□□□□ -1.34
SFT1YKL006C-A FIG4P42837 879 aa6.7□□□□□ -1.34
SFT1YKL006C-A TEC1P18412 486 aa6.69□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms