RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C TY1A-MR2P0CX69 440 aa6.91□□□□□ -1.3
ATG27YJL178C TY1A-JR2P47099 440 aa6.91□□□□□ -1.3
ATG27YJL178C YNR021WP53723 404 aaKnown RBP6.91□□□□□ -1.3
ATG27YJL178C TY1A-DR1Q03856 440 aa6.91□□□□□ -1.3
ATG27YJL178C TY1A-ML1Q04706 440 aaKnown RBP6.91□□□□□ -1.3
ATG27YJL178C TY1A-BRQ12217 440 aa6.91□□□□□ -1.3
ATG27YJL178C TY1A-NL2Q12470 440 aa6.91□□□□□ -1.3
ATG27YJL178C TY1A-GR2Q12485 440 aa6.91□□□□□ -1.3
ATG27YJL178C SEC2P17065 759 aa6.9□□□□□ -1.3
ATG27YJL178C CLB5P30283 435 aa6.9□□□□□ -1.3
ATG27YJL178C PRT1P06103 763 aaKnown RBP6.89□□□□□ -1.31
ATG27YJL178C SDH2P21801 266 aa6.89□□□□□ -1.31
ATG27YJL178C TEA1P47988 759 aa6.89□□□□□ -1.31
ATG27YJL178C ERF2Q06551 359 aa6.89□□□□□ -1.31
ATG27YJL178C GYP1Q08484 637 aa6.89□□□□□ -1.31
ATG27YJL178C GLC3P32775 704 aa6.88□□□□□ -1.31
ATG27YJL178C NPL4P33755 580 aa6.87□□□□□ -1.31
ATG27YJL178C NIS1P53939 407 aa6.87□□□□□ -1.31
ATG27YJL178C SAS4Q04003 481 aa6.87□□□□□ -1.31
ATG27YJL178C KEX2P13134 814 aa6.86□□□□□ -1.31
ATG27YJL178C GCD11P32481 527 aaKnown RBP6.86□□□□□ -1.31
ATG27YJL178C SIT4P20604 311 aa6.85□□□□□ -1.31
ATG27YJL178C ATF2P53296 535 aa6.83□□□□□ -1.32
ATG27YJL178C FPK1P53739 893 aa6.81□□□□□ -1.32
ATG27YJL178C AIM7Q12156 149 aa6.81□□□□□ -1.32
ATG27YJL178C RAS1P01119 309 aa6.8□□□□□ -1.32
ATG27YJL178C RTF1P53064 558 aa6.8□□□□□ -1.32
ATG27YJL178C LEO1P38439 464 aa6.79□□□□□ -1.32
ATG27YJL178C YNL115CP53925 644 aa6.79□□□□□ -1.32
ATG27YJL178C AGE1Q04412 482 aa6.79□□□□□ -1.32
ATG27YJL178C RPN1P38764 993 aaKnown RBP6.77□□□□□ -1.33
ATG27YJL178C RRN7P40992 514 aa6.77□□□□□ -1.33
ATG27YJL178C AMS1P22855 1083 aa6.76□□□□□ -1.33
ATG27YJL178C SCJ1P25303 377 aa6.76□□□□□ -1.33
ATG27YJL178C MRF1P30775 413 aaPredicted RBP6.76□□□□□ -1.33
ATG27YJL178C SPT16P32558 1035 aaKnown RBP6.75□□□□□ -1.33
ATG27YJL178C PAC1P39946 494 aaKnown RBP6.75□□□□□ -1.33
ATG27YJL178C TUB4P53378 473 aa6.75□□□□□ -1.33
ATG27YJL178C HST2P53686 357 aa6.75□□□□□ -1.33
ATG27YJL178C YMR196WQ04336 1088 aa6.75□□□□□ -1.33
ATG27YJL178C KTR1P27810 393 aaKnown RBP6.73□□□□□ -1.33
ATG27YJL178C KIN1P13185 1064 aa6.72□□□□□ -1.33
ATG27YJL178C SLY41P22215 453 aa6.72□□□□□ -1.33
ATG27YJL178C CST6P40535 587 aa6.72□□□□□ -1.33
ATG27YJL178C TYW1Q08960 810 aaKnown RBP6.72□□□□□ -1.33
ATG27YJL178C YEL077CQ3E7X8 1277 aa6.72□□□□□ -1.33
ATG27YJL178C ERG12P07277 443 aa6.71□□□□□ -1.34
ATG27YJL178C MOD5P07884 428 aa6.7□□□□□ -1.34
ATG27YJL178C GLN1P32288 370 aaKnown RBP6.7□□□□□ -1.34
ATG27YJL178C MMP1Q12372 583 aa6.7□□□□□ -1.34
ATG27YJL178C ESS1P22696 170 aa6.69□□□□□ -1.34
ATG27YJL178C PAT1P25644 796 aaKnown RBP6.69□□□□□ -1.34
ATG27YJL178C LAM6Q08001 693 aa6.69□□□□□ -1.34
ATG27YJL178C YJU3P28321 313 aa6.67□□□□□ -1.34
ATG27YJL178C BDP1P46678 594 aa6.67□□□□□ -1.34
ATG27YJL178C CSN12P47130 423 aa6.67□□□□□ -1.34
ATG27YJL178C TRM1P15565 570 aaKnown RBP6.65□□□□□ -1.34
ATG27YJL178C CLA4P48562 842 aa6.65□□□□□ -1.34
ATG27YJL178C PUS6P53294 404 aa6.65□□□□□ -1.34
ATG27YJL178C FRK1Q03002 865 aaPredicted RBP6.65□□□□□ -1.34
ATG27YJL178C RSC30P38781 883 aa6.64□□□□□ -1.35
ATG27YJL178C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
ATG27YJL178C PDC1P06169 563 aaKnown RBP6.63□□□□□ -1.35
ATG27YJL178C TRK1P12685 1235 aa6.63□□□□□ -1.35
ATG27YJL178C GUA1P38625 525 aaKnown RBP6.62□□□□□ -1.35
ATG27YJL178C YDL206WQ12424 762 aa6.62□□□□□ -1.35
ATG27YJL178C TPD3P31383 635 aa6.61□□□□□ -1.35
ATG27YJL178C PKH3Q03306 898 aaPredicted RBP6.61□□□□□ -1.35
ATG27YJL178C AIR1P40507 360 aaKnown RBP6.6□□□□□ -1.35
ATG27YJL178C HXT10P43581 546 aa6.6□□□□□ -1.35
ATG27YJL178C RPA14P50106 137 aa6.6□□□□□ -1.35
ATG27YJL178C KXD1P53158 218 aa6.6□□□□□ -1.35
ATG27YJL178C YPR097WQ06839 1073 aa6.6□□□□□ -1.35
ATG27YJL178C TBF1Q02457 562 aa6.59□□□□□ -1.35
ATG27YJL178C PUS5Q06244 254 aa6.59□□□□□ -1.35
ATG27YJL178C RRD1P40454 393 aaKnown RBP6.58□□□□□ -1.36
ATG27YJL178C YPL062WQ02781 134 aa6.58□□□□□ -1.36
ATG27YJL178C ARG8P18544 423 aa6.56□□□□□ -1.36
ATG27YJL178C HED1Q03937 162 aa6.56□□□□□ -1.36
ATG27YJL178C ALR1Q08269 859 aa6.56□□□□□ -1.36
ATG27YJL178C RAD59Q12223 238 aa6.56□□□□□ -1.36
ATG27YJL178C SSA2P10592 639 aaKnown RBP6.55□□□□□ -1.36
ATG27YJL178C CDC4P07834 779 aa6.52□□□□□ -1.37
ATG27YJL178C DMA2P53924 522 aa6.52□□□□□ -1.37
ATG27YJL178C HPC2Q01448 625 aa6.52□□□□□ -1.37
ATG27YJL178C MET32Q12041 191 aa6.51□□□□□ -1.37
ATG27YJL178C TFB3Q03290 321 aa6.48□□□□□ -1.37
ATG27YJL178C VAC17P25591 423 aa6.47□□□□□ -1.37
ATG27YJL178C SYH1Q02875 849 aaKnown RBP6.47□□□□□ -1.37
ATG27YJL178C PKC1P24583 1151 aa6.46□□□□□ -1.38
ATG27YJL178C FIG4P42837 879 aa6.46□□□□□ -1.38
ATG27YJL178C MAK16P10962 306 aaPredicted RBP6.45□□□□□ -1.38
ATG27YJL178C KIP2P28743 706 aa6.44□□□□□ -1.38
ATG27YJL178C IXR1P33417 597 aa6.44□□□□□ -1.38
ATG27YJL178C ASH1P34233 588 aa6.44□□□□□ -1.38
ATG27YJL178C ITT1Q04638 464 aa6.44□□□□□ -1.38
ATG27YJL178C BRL1P38770 471 aa6.43□□□□□ -1.38
ATG27YJL178C AFT1P22149 690 aa6.42□□□□□ -1.38
ATG27YJL178C HGH1P48362 394 aaKnown RBP6.42□□□□□ -1.38
ATG27YJL178C YPR084WQ06821 456 aa6.42□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 6.7 ms