RNA–Protein interactions for RNA: YJL074C

SMC3, Transcript of Subunit of the multiprotein cohesin complex, yeast

Gene SMC3, Length 3,693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC3	YJL074C	PDS5	Q04264	1277 aa		4.33	□□□□□ -1.72
SMC3	YJL074C	VPS27	P40343	622 aa	Known RBP	4.33	□□□□□ -1.72
SMC3	YJL074C	DMA2	P53924	522 aa		4.33	□□□□□ -1.72
SMC3	YJL074C	YRF1-2	P40105	1681 aa		4.32	□□□□□ -1.72
SMC3	YJL074C	TOP1	P04786	769 aa		4.32	□□□□□ -1.72
SMC3	YJL074C	EAF7	P53911	425 aa	Known RBP	4.31	□□□□□ -1.72
SMC3	YJL074C	RVB2	Q12464	471 aa	Known RBP	4.31	□□□□□ -1.72
SMC3	YJL074C	RLF2	Q12495	606 aa		4.31	□□□□□ -1.72
SMC3	YJL074C	YRF1-4	O13559	1382 aa		4.3	□□□□□ -1.72
SMC3	YJL074C	YML133C	Q03099	1374 aa		4.3	□□□□□ -1.72
SMC3	YJL074C	YLL067C	Q07888	1374 aa		4.3	□□□□□ -1.72
SMC3	YJL074C	YLL066C	Q99208	1374 aa		4.3	□□□□□ -1.72
SMC3	YJL074C	ROX1	P25042	368 aa		4.3	□□□□□ -1.72
SMC3	YJL074C	YFR016C	P43597	1233 aa	Known RBP	4.3	□□□□□ -1.72
SMC3	YJL074C	BUD21	Q08492	214 aa	Predicted RBP	4.3	□□□□□ -1.72
SMC3	YJL074C	DRS2	P39524	1355 aa		4.29	□□□□□ -1.72
SMC3	YJL074C	RRP5	Q05022	1729 aa	Known RBP	4.29	□□□□□ -1.72
SMC3	YJL074C	PAF1	P38351	445 aa		4.28	□□□□□ -1.72
SMC3	YJL074C	SNU71	P53207	620 aa	Known RBP	4.27	□□□□□ -1.73
SMC3	YJL074C	URB1	P34241	1764 aa	Known RBP	4.27	□□□□□ -1.73
SMC3	YJL074C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
SMC3	YJL074C	SCT1	P32784	759 aa		4.27	□□□□□ -1.73
SMC3	YJL074C	SIS2	P36024	562 aa		4.26	□□□□□ -1.73
SMC3	YJL074C	PCT1	P13259	424 aa		4.26	□□□□□ -1.73
SMC3	YJL074C	SLN1	P39928	1220 aa	Predicted RBP	4.26	□□□□□ -1.73
SMC3	YJL074C	BNI1	P41832	1953 aa		4.26	□□□□□ -1.73
SMC3	YJL074C	SUI2	P20459	304 aa	Known RBP	4.25	□□□□□ -1.73
SMC3	YJL074C	LSP1	Q12230	341 aa	Known RBP	4.25	□□□□□ -1.73
SMC3	YJL074C	NOT3	P06102	836 aa	Known RBP	4.25	□□□□□ -1.73
SMC3	YJL074C	FPR3	P38911	411 aa	Known RBP	4.25	□□□□□ -1.73
SMC3	YJL074C	MET10	P39692	1035 aa		4.25	□□□□□ -1.73
SMC3	YJL074C	CKB1	P43639	278 aa		4.25	□□□□□ -1.73
SMC3	YJL074C	ESL2	P36168	1195 aa		4.24	□□□□□ -1.73
SMC3	YJL074C	FUN12	P39730	1002 aa	Known RBP	4.24	□□□□□ -1.73
SMC3	YJL074C	BNR1	P40450	1375 aa		4.24	□□□□□ -1.73
SMC3	YJL074C	MNN4	P36044	1178 aa		4.24	□□□□□ -1.73
SMC3	YJL074C	TY4B-H	P0C2J7	1802 aa		4.24	□□□□□ -1.73
SMC3	YJL074C	BCK1	Q01389	1478 aa		4.24	□□□□□ -1.73
SMC3	YJL074C	SIR4	P11978	1358 aa		4.24	□□□□□ -1.73
SMC3	YJL074C	YEF3	P16521	1044 aa	Known RBP	4.23	□□□□□ -1.73
SMC3	YJL074C	RPN1	P38764	993 aa	Known RBP	4.23	□□□□□ -1.73
SMC3	YJL074C	KRI1	P42846	591 aa	Known RBP	4.22	□□□□□ -1.73
SMC3	YJL074C	YDL144C	Q07589	356 aa		4.22	□□□□□ -1.73
SMC3	YJL074C	MSP1	P28737	362 aa		4.22	□□□□□ -1.73
SMC3	YJL074C	KIP3	P53086	805 aa	Known RBP	4.22	□□□□□ -1.73
SMC3	YJL074C	FKH1	P40466	484 aa		4.22	□□□□□ -1.73
SMC3	YJL074C	TY4B-J	P47024	1803 aa		4.22	□□□□□ -1.73
SMC3	YJL074C	TAF5	P38129	798 aa		4.21	□□□□□ -1.74
SMC3	YJL074C	QCR6	P00127	147 aa		4.21	□□□□□ -1.74
SMC3	YJL074C	VPS24	P36095	224 aa	Known RBP	4.21	□□□□□ -1.74
SMC3	YJL074C	KRE5	P22023	1365 aa		4.21	□□□□□ -1.74
SMC3	YJL074C	KNS1	P32350	737 aa	Predicted RBP	4.2	□□□□□ -1.74
SMC3	YJL074C	TRK1	P12685	1235 aa		4.2	□□□□□ -1.74
SMC3	YJL074C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
SMC3	YJL074C	UTP10	P42945	1769 aa	Known RBP	4.19	□□□□□ -1.74
SMC3	YJL074C	RTG3	P38165	486 aa		4.18	□□□□□ -1.74
SMC3	YJL074C	YIL092W	P40497	633 aa		4.18	□□□□□ -1.74
SMC3	YJL074C	PIL1	P53252	339 aa	Known RBP	4.18	□□□□□ -1.74
SMC3	YJL074C	NOP8	Q08287	484 aa	Predicted RBP	4.18	□□□□□ -1.74
SMC3	YJL074C	RRP46	P53256	223 aa	Predicted RBP	4.18	□□□□□ -1.74
SMC3	YJL074C	CTR9	P89105	1077 aa		4.18	□□□□□ -1.74
SMC3	YJL074C	HAP5	Q02516	242 aa		4.17	□□□□□ -1.74
SMC3	YJL074C	SPE2	P21182	396 aa		4.17	□□□□□ -1.74
SMC3	YJL074C	YAP3	P38749	330 aa		4.17	□□□□□ -1.74
SMC3	YJL074C	DJP1	P40564	432 aa		4.17	□□□□□ -1.74
SMC3	YJL074C	TEA1	P47988	759 aa		4.17	□□□□□ -1.74
SMC3	YJL074C	SAP155	P43612	1002 aa		4.16	□□□□□ -1.74
SMC3	YJL074C	HEF3	P53978	1044 aa	Known RBP	4.16	□□□□□ -1.74
SMC3	YJL074C	POL32	P47110	350 aa		4.16	□□□□□ -1.74
SMC3	YJL074C	ROM2	P51862	1356 aa	Known RBP	4.16	□□□□□ -1.74
SMC3	YJL074C	RAD2	P07276	1031 aa		4.16	□□□□□ -1.74
SMC3	YJL074C	MPP10	P47083	593 aa	Known RBP	4.16	□□□□□ -1.74
SMC3	YJL074C	ARL1	P38116	183 aa	Known RBP	4.15	□□□□□ -1.75
SMC3	YJL074C	YGR130C	P53278	816 aa		4.15	□□□□□ -1.75
SMC3	YJL074C	PTP3	P40048	928 aa		4.14	□□□□□ -1.75
SMC3	YJL074C	FKS3	Q04952	1785 aa		4.14	□□□□□ -1.75
SMC3	YJL074C	SWE1	P32944	819 aa		4.14	□□□□□ -1.75
SMC3	YJL074C	YML020W	Q03722	664 aa		4.14	□□□□□ -1.75
SMC3	YJL074C	NOP58	Q12499	511 aa	Known RBP	4.14	□□□□□ -1.75
SMC3	YJL074C	THI22	Q06490	572 aa		4.14	□□□□□ -1.75
SMC3	YJL074C	KRE33	P53914	1056 aa	Known RBP	4.13	□□□□□ -1.75
SMC3	YJL074C	RRT14	P40470	206 aa		4.13	□□□□□ -1.75
SMC3	YJL074C	RPS0B	P46654	252 aa	Known RBP	4.13	□□□□□ -1.75
SMC3	YJL074C	ATG36	P46983	293 aa		4.13	□□□□□ -1.75
SMC3	YJL074C	NUP145	P49687	1317 aa		4.13	□□□□□ -1.75
SMC3	YJL074C	PRD1	P25375	712 aa		4.12	□□□□□ -1.75
SMC3	YJL074C	NOP53	Q12080	455 aa	Known RBP	4.12	□□□□□ -1.75
SMC3	YJL074C	PSK1	P31374	1356 aa		4.12	□□□□□ -1.75
SMC3	YJL074C	ITC1	P53125	1264 aa		4.11	□□□□□ -1.75
SMC3	YJL074C	AUS1	Q08409	1394 aa		4.11	□□□□□ -1.75
SMC3	YJL074C	BRL1	P38770	471 aa		4.11	□□□□□ -1.75
SMC3	YJL074C	BDH2	P39713	417 aa		4.11	□□□□□ -1.75
SMC3	YJL074C	ECM16	Q04217	1267 aa	Known RBP	4.11	□□□□□ -1.75
SMC3	YJL074C	RAD9	P14737	1309 aa		4.11	□□□□□ -1.75
SMC3	YJL074C	RTR1	P40084	226 aa	Predicted RBP	4.1	□□□□□ -1.75
SMC3	YJL074C	HYR1	P40581	163 aa	Known RBP	4.1	□□□□□ -1.75
SMC3	YJL074C	TAP42	Q04372	366 aa		4.1	□□□□□ -1.75
SMC3	YJL074C	RKM3	P38222	552 aa		4.1	□□□□□ -1.75
SMC3	YJL074C	LCD1	Q04377	747 aa		4.1	□□□□□ -1.75
SMC3	YJL074C	SRS2	P12954	1174 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 54.8 ms