RNA–Protein interactions for RNA: YIL137C

TMA108, Transcript of Ribosome-associated protein that is involved in ribosome biogenesis, yeast

Gene TMA108, Length 2,841 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TMA108	YIL137C	NMD2	P38798	1089 aa	Known RBP	4.46	□□□□□ -1.7
TMA108	YIL137C	TOP2	P06786	1428 aa	Known RBP	4.46	□□□□□ -1.7
TMA108	YIL137C	TIF1	P10081	395 aa	Known RBP	4.45	□□□□□ -1.7
TMA108	YIL137C	ATE1	P16639	503 aa		4.45	□□□□□ -1.7
TMA108	YIL137C	SLD2	P34252	453 aa		4.45	□□□□□ -1.7
TMA108	YIL137C	TTI1	P36097	1038 aa		4.45	□□□□□ -1.7
TMA108	YIL137C	IPL1	P38991	367 aa		4.45	□□□□□ -1.7
TMA108	YIL137C	FPR4	Q06205	392 aa	Predicted RBP	4.45	□□□□□ -1.7
TMA108	YIL137C	NOP53	Q12080	455 aa	Known RBP	4.45	□□□□□ -1.7
TMA108	YIL137C	RKR1	Q04781	1562 aa		4.45	□□□□□ -1.7
TMA108	YIL137C	ESC1	Q03661	1658 aa	Known RBP	4.45	□□□□□ -1.7
TMA108	YIL137C	CHD1	P32657	1468 aa		4.45	□□□□□ -1.7
TMA108	YIL137C	MAK11	P20484	414 aa	Known RBP	4.45	□□□□□ -1.7
TMA108	YIL137C	SSA4	P22202	642 aa	Known RBP	4.45	□□□□□ -1.7
TMA108	YIL137C	KTR1	P27810	393 aa	Known RBP	4.45	□□□□□ -1.7
TMA108	YIL137C	SVL3	Q03088	825 aa	Known RBP	4.45	□□□□□ -1.7
TMA108	YIL137C	TOA1	P32773	286 aa		4.44	□□□□□ -1.7
TMA108	YIL137C	SIS2	P36024	562 aa		4.44	□□□□□ -1.7
TMA108	YIL137C	YML083C	Q04526	418 aa		4.44	□□□□□ -1.7
TMA108	YIL137C	RPA190	P10964	1664 aa	Known RBP	4.44	□□□□□ -1.7
TMA108	YIL137C	PUP1	P25043	261 aa		4.44	□□□□□ -1.7
TMA108	YIL137C	CDC3	P32457	520 aa	Known RBP	4.44	□□□□□ -1.7
TMA108	YIL137C	RPS0B	P46654	252 aa	Known RBP	4.44	□□□□□ -1.7
TMA108	YIL137C	BRE1	Q07457	700 aa	Known RBP	4.44	□□□□□ -1.7
TMA108	YIL137C	STB3	Q12427	513 aa		4.44	□□□□□ -1.7
TMA108	YIL137C	DNF1	P32660	1571 aa		4.44	□□□□□ -1.7
TMA108	YIL137C	AI2	P03876	854 aa		4.43	□□□□□ -1.7
TMA108	YIL137C	CPS1	P27614	576 aa		4.43	□□□□□ -1.7
TMA108	YIL137C	COX6	P00427	148 aa		4.43	□□□□□ -1.7
TMA108	YIL137C	TOM20	P35180	183 aa		4.43	□□□□□ -1.7
TMA108	YIL137C	PAN1	P32521	1480 aa		4.42	□□□□□ -1.7
TMA108	YIL137C	YOR1	P53049	1477 aa		4.42	□□□□□ -1.7
TMA108	YIL137C	YJL007C	P47080	104 aa		4.42	□□□□□ -1.7
TMA108	YIL137C	RNH70	P53331	553 aa		4.41	□□□□□ -1.7
TMA108	YIL137C	SMC4	Q12267	1418 aa		4.41	□□□□□ -1.7
TMA108	YIL137C	MET5	P47169	1442 aa		4.41	□□□□□ -1.7
TMA108	YIL137C	TRL1	P09880	827 aa	Known RBP	4.41	□□□□□ -1.7
TMA108	YIL137C	IOC3	P43596	787 aa		4.41	□□□□□ -1.7
TMA108	YIL137C	BUD6	P41697	788 aa		4.4	□□□□□ -1.7
TMA108	YIL137C	BIO2	P32451	375 aa		4.4	□□□□□ -1.7
TMA108	YIL137C	GRX4	P32642	244 aa		4.4	□□□□□ -1.7
TMA108	YIL137C	HAT1	Q12341	374 aa		4.4	□□□□□ -1.7
TMA108	YIL137C	CIT2	P08679	460 aa		4.4	□□□□□ -1.71
TMA108	YIL137C	WHI5	Q12416	295 aa		4.4	□□□□□ -1.71
TMA108	YIL137C	TY1B-JR2	P47100	1755 aa	Known RBP	4.39	□□□□□ -1.71
TMA108	YIL137C	TY1B-ER2	Q03619	1755 aa		4.39	□□□□□ -1.71
TMA108	YIL137C	TY1B-MR1	Q04214	1755 aa		4.39	□□□□□ -1.71
TMA108	YIL137C	TY1B-MR2	Q04670	1755 aa	Known RBP	4.39	□□□□□ -1.71
TMA108	YIL137C	TY1B-LR1	Q12088	1755 aa	Known RBP	4.39	□□□□□ -1.71
TMA108	YIL137C	TY1B-NL1	Q12112	1755 aa		4.39	□□□□□ -1.71
TMA108	YIL137C	TY1B-GR1	Q12141	1755 aa		4.39	□□□□□ -1.71
TMA108	YIL137C	TY1B-BL	Q12490	1755 aa		4.39	□□□□□ -1.71
TMA108	YIL137C	REF2	P42073	533 aa	Predicted RBP	4.39	□□□□□ -1.71
TMA108	YIL137C	YDR090C	Q03193	310 aa		4.39	□□□□□ -1.71
TMA108	YIL137C	TFC8	Q12308	588 aa		4.39	□□□□□ -1.71
TMA108	YIL137C	MMS22	Q06164	1454 aa		4.39	□□□□□ -1.71
TMA108	YIL137C	STU1	P38198	1513 aa		4.38	□□□□□ -1.71
TMA108	YIL137C	MAK16	P10962	306 aa	Predicted RBP	4.38	□□□□□ -1.71
TMA108	YIL137C	MNN4	P36044	1178 aa		4.38	□□□□□ -1.71
TMA108	YIL137C	NNF1	P47149	201 aa		4.38	□□□□□ -1.71
TMA108	YIL137C	TAT2	P38967	592 aa		4.37	□□□□□ -1.71
TMA108	YIL137C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.37	□□□□□ -1.71	not detected
TMA108	YIL137C	TPM2	P40414	161 aa		4.37	□□□□□ -1.71
TMA108	YIL137C	MSC6	Q08818	692 aa	Known RBP	4.37	□□□□□ -1.71
TMA108	YIL137C	YOL098C	Q12496	1037 aa		4.37	□□□□□ -1.71
TMA108	YIL137C	RAD2	P07276	1031 aa		4.36	□□□□□ -1.71
TMA108	YIL137C	SUP45	P12385	437 aa	Known RBP	4.36	□□□□□ -1.71
TMA108	YIL137C	GAL11	P19659	1081 aa		4.36	□□□□□ -1.71
TMA108	YIL137C	RPA135	P22138	1203 aa	Known RBP	4.36	□□□□□ -1.71
TMA108	YIL137C	COQ8	P27697	501 aa		4.36	□□□□□ -1.71
TMA108	YIL137C	NFU1	P32860	256 aa		4.36	□□□□□ -1.71
TMA108	YIL137C	BOI2	P39969	1040 aa		4.36	□□□□□ -1.71
TMA108	YIL137C	MRX10	Q05648	414 aa		4.36	□□□□□ -1.71
TMA108	YIL137C	NTE1	Q04958	1679 aa		4.36	□□□□□ -1.71
TMA108	YIL137C	VMA4	P22203	233 aa	Known RBP	4.36	□□□□□ -1.71
TMA108	YIL137C	BUD31	P25337	157 aa	Predicted RBP	4.36	□□□□□ -1.71
TMA108	YIL137C	SVF1	Q05515	481 aa		4.36	□□□□□ -1.71
TMA108	YIL137C	DAL5	P15365	543 aa		4.36	□□□□□ -1.71
TMA108	YIL137C	KIP3	P53086	805 aa	Known RBP	4.36	□□□□□ -1.71
TMA108	YIL137C	ALG12	P53730	551 aa		4.36	□□□□□ -1.71
TMA108	YIL137C	ITT1	Q04638	464 aa		4.36	□□□□□ -1.71
TMA108	YIL137C	TPS3	P38426	1054 aa	Known RBP	4.35	□□□□□ -1.71
TMA108	YIL137C	RPO21	P04050	1733 aa	Known RBP	4.35	□□□□□ -1.71
TMA108	YIL137C	YRF1-1	P0CX20	1796 aa		4.35	□□□□□ -1.71
TMA108	YIL137C	YRF1-5	P0CX21	1796 aa		4.35	□□□□□ -1.71
TMA108	YIL137C	YRF1-8	P0CX22	1796 aa		4.35	□□□□□ -1.71
TMA108	YIL137C	EDS1	P38073	919 aa		4.35	□□□□□ -1.71
TMA108	YIL137C	MDJ2	P42834	146 aa		4.35	□□□□□ -1.71
TMA108	YIL137C	YJR107W	P47145	328 aa		4.35	□□□□□ -1.71
TMA108	YIL137C	YDL121C	Q07541	149 aa		4.35	□□□□□ -1.71
TMA108	YIL137C	YOL057W	Q08225	711 aa		4.35	□□□□□ -1.71
TMA108	YIL137C	PSH1	Q12161	406 aa		4.35	□□□□□ -1.71
TMA108	YIL137C	MYO4	P32492	1471 aa		4.35	□□□□□ -1.71
TMA108	YIL137C	SPP41	P38904	1435 aa		4.35	□□□□□ -1.71
TMA108	YIL137C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.34	□□□□□ -1.71	not detected
TMA108	YIL137C	CSN12	P47130	423 aa		4.34	□□□□□ -1.71
TMA108	YIL137C	RPN4	Q03465	531 aa		4.34	□□□□□ -1.71
TMA108	YIL137C	ATF2	P53296	535 aa		4.34	□□□□□ -1.72
TMA108	YIL137C	HIF1	Q12373	385 aa		4.34	□□□□□ -1.72
TMA108	YIL137C	VTH1	P40438	1549 aa		4.34	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms