RNA–Protein interactions for RNA: YHR175W

CTR2, Transcript of Putative low-affinity copper transporter of the vacuolar membrane, yeastyeast

Gene CTR2, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTR2YHR175W MID1P41821 548 aa8.19□□□□□ -1.1
CTR2YHR175W TFG1P41895 735 aaPredicted RBP8.19□□□□□ -1.1
CTR2YHR175W PEX29Q03370 554 aa8.19□□□□□ -1.1
CTR2YHR175W ISU2Q12056 156 aa8.19□□□□□ -1.1
CTR2YHR175W RAD59Q12223 238 aa8.19□□□□□ -1.1
CTR2YHR175W YJL171CP46992 396 aa8.18□□□□□ -1.1
CTR2YHR175W YRR1Q12172 810 aa8.18□□□□□ -1.1
CTR2YHR175W ECM5Q03214 1411 aa8.18□□□□□ -1.1
CTR2YHR175W TIF1P10081 395 aaKnown RBP8.17□□□□□ -1.1
CTR2YHR175W ARG8P18544 423 aa8.17□□□□□ -1.1
CTR2YHR175W MPC54Q08550 464 aa8.17□□□□□ -1.1
CTR2YHR175W XRN1P22147 1528 aaKnown RBP8.17□□□□□ -1.1
CTR2YHR175W SEC61P32915 480 aa8.16□□□□□ -1.1
CTR2YHR175W SSA4P22202 642 aaKnown RBP8.15□□□□□ -1.1
CTR2YHR175W SLY41P22215 453 aa8.15□□□□□ -1.1
CTR2YHR175W RTG1P32607 177 aa8.15□□□□□ -1.1
CTR2YHR175W YJU3P28321 313 aa8.14□□□□□ -1.11
CTR2YHR175W RTG2P32608 588 aaKnown RBP8.14□□□□□ -1.11
CTR2YHR175W RTF1P53064 558 aa8.14□□□□□ -1.11
CTR2YHR175W NMA111P53920 997 aa8.14□□□□□ -1.11
CTR2YHR175W YNL115CP53925 644 aa8.14□□□□□ -1.11
CTR2YHR175W SSA1P10591 642 aaKnown RBP8.13□□□□□ -1.11
CTR2YHR175W FKH1P40466 484 aa8.13□□□□□ -1.11
CTR2YHR175W SUB2Q07478 446 aaKnown RBP8.13□□□□□ -1.11
CTR2YHR175W LAM6Q08001 693 aa8.13□□□□□ -1.11
CTR2YHR175W LDB19Q12502 818 aa8.13□□□□□ -1.11
CTR2YHR175W YNL108CP53929 270 aa8.12□□□□□ -1.11
CTR2YHR175W NPL4P33755 580 aa8.11□□□□□ -1.11
CTR2YHR175W AIR2Q12476 344 aaKnown RBP8.11□□□□□ -1.11
CTR2YHR175W BUD4P47136 1447 aa8.11□□□□□ -1.11
CTR2YHR175W SPT5P27692 1063 aaKnown RBP8.1□□□□□ -1.11
CTR2YHR175W BIO2P32451 375 aa8.1□□□□□ -1.11
CTR2YHR175W YPR204WQ08995 1032 aa8.1□□□□□ -1.11
CTR2YHR175W NCR1Q12200 1170 aa8.1□□□□□ -1.11
CTR2YHR175W THO2P53552 1597 aaKnown RBP8.09□□□□□ -1.11
CTR2YHR175W GEF1P37020 779 aa8.08□□□□□ -1.12
CTR2YHR175W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.08□□□□□ -1.12not detected
CTR2YHR175W ERG12P07277 443 aa8.07□□□□□ -1.12
CTR2YHR175W RSC30P38781 883 aa8.07□□□□□ -1.12
CTR2YHR175W PUS6P53294 404 aa8.07□□□□□ -1.12
CTR2YHR175W YDL129WQ07555 291 aa8.07□□□□□ -1.12
CTR2YHR175W SUP45P12385 437 aaKnown RBP8.06□□□□□ -1.12
CTR2YHR175W NUD1P32336 851 aa8.06□□□□□ -1.12
CTR2YHR175W MAK16P10962 306 aaPredicted RBP8.05□□□□□ -1.12
CTR2YHR175W KEX2P13134 814 aa8.04□□□□□ -1.12
CTR2YHR175W TTI1P36097 1038 aa8.04□□□□□ -1.12
CTR2YHR175W CPS1P27614 576 aa8.03□□□□□ -1.12
CTR2YHR175W SIS2P36024 562 aa8.03□□□□□ -1.12
CTR2YHR175W TBF1Q02457 562 aa8.03□□□□□ -1.12
CTR2YHR175W BMT6Q12291 365 aa8.03□□□□□ -1.12
CTR2YHR175W TRM1P15565 570 aaKnown RBP8.02□□□□□ -1.13
CTR2YHR175W HAP5Q02516 242 aa8.02□□□□□ -1.13
CTR2YHR175W URN1Q06525 465 aaKnown RBP8.02□□□□□ -1.13
CTR2YHR175W YDJ1P25491 409 aaKnown RBP8.01□□□□□ -1.13
CTR2YHR175W SLX8P40072 274 aa8.01□□□□□ -1.13
CTR2YHR175W YPP1P46951 817 aa8.01□□□□□ -1.13
CTR2YHR175W RPL34AP87262 121 aaPredicted RBP8.01□□□□□ -1.13
CTR2YHR175W REV3P14284 1504 aa8.01□□□□□ -1.13
CTR2YHR175W ENO2P00925 437 aaKnown RBP7.99□□□□□ -1.13
CTR2YHR175W ARH1P48360 493 aa7.99□□□□□ -1.13
CTR2YHR175W NAF1P53919 492 aaKnown RBP7.99□□□□□ -1.13
CTR2YHR175W GCD11P32481 527 aaKnown RBP7.98□□□□□ -1.13
CTR2YHR175W ERF2Q06551 359 aa7.98□□□□□ -1.13
CTR2YHR175W MDS3P53094 1487 aa7.98□□□□□ -1.13
CTR2YHR175W ENO1P00924 437 aaKnown RBP7.97□□□□□ -1.13
CTR2YHR175W PDR1P12383 1068 aa7.97□□□□□ -1.13
CTR2YHR175W SAP30P38429 201 aa7.97□□□□□ -1.13
CTR2YHR175W TAF2P23255 1407 aa7.96□□□□□ -1.13
CTR2YHR175W ISM1P48526 1002 aa7.96□□□□□ -1.14
CTR2YHR175W MRX10Q05648 414 aa7.95□□□□□ -1.14
CTR2YHR175W RIM21P48565 533 aa7.94□□□□□ -1.14
CTR2YHR175W ELP4Q02884 456 aaKnown RBP7.94□□□□□ -1.14
CTR2YHR175W YML020WQ03722 664 aa7.94□□□□□ -1.14
CTR2YHR175W RAM1P22007 431 aa7.93□□□□□ -1.14
CTR2YHR175W BNI4P53858 892 aa7.93□□□□□ -1.14
CTR2YHR175W STR2P47164 639 aa7.92□□□□□ -1.14
CTR2YHR175W TUB4P53378 473 aa7.92□□□□□ -1.14
CTR2YHR175W YDL206WQ12424 762 aa7.92□□□□□ -1.14
CTR2YHR175W SIN3P22579 1536 aa7.92□□□□□ -1.14
CTR2YHR175W PAT1P25644 796 aaKnown RBP7.91□□□□□ -1.14
CTR2YHR175W SPT23P35210 1082 aa7.91□□□□□ -1.14
CTR2YHR175W RPA14P50106 137 aa7.91□□□□□ -1.14
CTR2YHR175W NOB1Q08444 459 aaKnown RBP7.91□□□□□ -1.14
CTR2YHR175W ENV9Q08651 330 aa7.91□□□□□ -1.14
CTR2YHR175W PEP1P32319 1579 aa7.91□□□□□ -1.14
CTR2YHR175W ATG2P53855 1592 aa7.9□□□□□ -1.14
CTR2YHR175W SKI3P17883 1432 aaKnown RBP7.9□□□□□ -1.14
CTR2YHR175W PTC2P39966 464 aaKnown RBP7.9□□□□□ -1.14
CTR2YHR175W ALR1Q08269 859 aa7.9□□□□□ -1.14
CTR2YHR175W CDC3P32457 520 aaKnown RBP7.89□□□□□ -1.15
CTR2YHR175W BUD20Q08004 166 aaPredicted RBP7.89□□□□□ -1.15
CTR2YHR175W MCM16Q12262 181 aa7.89□□□□□ -1.15
CTR2YHR175W PUP1P25043 261 aa7.88□□□□□ -1.15
CTR2YHR175W SLD2P34252 453 aa7.88□□□□□ -1.15
CTR2YHR175W TGL4P36165 910 aa7.88□□□□□ -1.15
CTR2YHR175W KXD1P53158 218 aa7.88□□□□□ -1.15
CTR2YHR175W YPR097WQ06839 1073 aa7.88□□□□□ -1.15
CTR2YHR175W PRT1P06103 763 aaKnown RBP7.87□□□□□ -1.15
CTR2YHR175W SEC2P17065 759 aa7.86□□□□□ -1.15
CTR2YHR175W ATG3P40344 310 aa7.86□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms