RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C TY1B-DR6P0C2I3 1755 aa6.84□□□□□ -1.31
SFB3YHR098C TY1B-LR2P0C2I5 1755 aa6.84□□□□□ -1.31
SFB3YHR098C TY1B-LR3P0C2I6 1755 aaKnown RBP6.84□□□□□ -1.31
SFB3YHR098C TY1B-PR1P0C2I9 1755 aaKnown RBP6.84□□□□□ -1.31
SFB3YHR098C TY1B-PR2P0C2J0 1756 aa6.84□□□□□ -1.31
SFB3YHR098C TY1B-PR3P0C2J1 1755 aaKnown RBP6.84□□□□□ -1.31
SFB3YHR098C TY1B-JR1P47098 1755 aa6.84□□□□□ -1.31
SFB3YHR098C TY1B-ML2Q03434 1755 aaKnown RBP6.84□□□□□ -1.31
SFB3YHR098C TY1B-ER1Q03612 1755 aa6.84□□□□□ -1.31
SFB3YHR098C TY1B-ML1Q04711 1755 aaKnown RBP6.84□□□□□ -1.31
SFB3YHR098C TY1B-GR2Q12269 1755 aa6.84□□□□□ -1.31
SFB3YHR098C TY1B-OLQ12273 1755 aa6.84□□□□□ -1.31
SFB3YHR098C TY1B-PLQ12414 1755 aaKnown RBP6.84□□□□□ -1.31
SFB3YHR098C VTH1P40438 1549 aa6.84□□□□□ -1.31
SFB3YHR098C VTH2P40890 1549 aa6.84□□□□□ -1.31
SFB3YHR098C IQG1Q12280 1495 aa6.84□□□□□ -1.31
SFB3YHR098C TEA1P47988 759 aa6.84□□□□□ -1.31
SFB3YHR098C SNU71P53207 620 aaKnown RBP6.84□□□□□ -1.31
SFB3YHR098C ISW2Q08773 1120 aa6.84□□□□□ -1.31
SFB3YHR098C SMC3P47037 1230 aa6.83□□□□□ -1.32
SFB3YHR098C SNT2P53127 1403 aa6.83□□□□□ -1.32
SFB3YHR098C SWE1P32944 819 aa6.83□□□□□ -1.32
SFB3YHR098C TOP1P04786 769 aa6.82□□□□□ -1.32
SFB3YHR098C LSP1Q12230 341 aaKnown RBP6.8□□□□□ -1.32
SFB3YHR098C CAT8P39113 1433 aa6.8□□□□□ -1.32
SFB3YHR098C SPC110P32380 944 aa6.8□□□□□ -1.32
SFB3YHR098C CLB5P30283 435 aa6.8□□□□□ -1.32
SFB3YHR098C RIX1P38883 763 aaPredicted RBP6.79□□□□□ -1.32
SFB3YHR098C PDR12Q02785 1511 aa6.79□□□□□ -1.32
SFB3YHR098C DEF1P35732 738 aaKnown RBP6.79□□□□□ -1.32
SFB3YHR098C GEF1P37020 779 aa6.79□□□□□ -1.32
SFB3YHR098C SET1P38827 1080 aaKnown RBP6.79□□□□□ -1.32
SFB3YHR098C YNR021WP53723 404 aaKnown RBP6.78□□□□□ -1.32
SFB3YHR098C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.78□□□□□ -1.32not detected
SFB3YHR098C TPM2P40414 161 aa6.77□□□□□ -1.33
SFB3YHR098C NUP42P49686 430 aaKnown RBP6.77□□□□□ -1.33
SFB3YHR098C RSC1P53236 928 aa6.77□□□□□ -1.33
SFB3YHR098C FAR11P53917 953 aa6.77□□□□□ -1.33
SFB3YHR098C SEN54Q02825 467 aaPredicted RBP6.77□□□□□ -1.33
SFB3YHR098C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
SFB3YHR098C TY1B-BRQ12193 1756 aa6.77□□□□□ -1.33
SFB3YHR098C TY1B-GR3Q12316 1755 aa6.77□□□□□ -1.33
SFB3YHR098C TY1B-ORQ92393 1755 aa6.77□□□□□ -1.33
SFB3YHR098C RAD2P07276 1031 aa6.77□□□□□ -1.33
SFB3YHR098C KRI1P42846 591 aaKnown RBP6.77□□□□□ -1.33
SFB3YHR098C VPS70P47161 811 aa6.77□□□□□ -1.33
SFB3YHR098C MDS3P53094 1487 aa6.77□□□□□ -1.33
SFB3YHR098C TY1B-JR2P47100 1755 aaKnown RBP6.77□□□□□ -1.33
SFB3YHR098C TY1B-ER2Q03619 1755 aa6.77□□□□□ -1.33
SFB3YHR098C TY1B-MR1Q04214 1755 aa6.77□□□□□ -1.33
SFB3YHR098C TY1B-MR2Q04670 1755 aaKnown RBP6.77□□□□□ -1.33
SFB3YHR098C TY1B-LR1Q12088 1755 aaKnown RBP6.77□□□□□ -1.33
SFB3YHR098C TY1B-NL1Q12112 1755 aa6.77□□□□□ -1.33
SFB3YHR098C TY1B-GR1Q12141 1755 aa6.77□□□□□ -1.33
SFB3YHR098C TY1B-BLQ12490 1755 aa6.77□□□□□ -1.33
SFB3YHR098C SPB4P25808 606 aaPredicted RBP6.76□□□□□ -1.33
SFB3YHR098C LCD1Q04377 747 aa6.76□□□□□ -1.33
SFB3YHR098C MPP10P47083 593 aaKnown RBP6.76□□□□□ -1.33
SFB3YHR098C SNF2P22082 1703 aa6.76□□□□□ -1.33
SFB3YHR098C TAF5P38129 798 aa6.75□□□□□ -1.33
SFB3YHR098C ITC1P53125 1264 aa6.75□□□□□ -1.33
SFB3YHR098C DOP1Q03921 1698 aa6.75□□□□□ -1.33
SFB3YHR098C MCM2P29469 868 aa6.75□□□□□ -1.33
SFB3YHR098C GLN1P32288 370 aaKnown RBP6.75□□□□□ -1.33
SFB3YHR098C TRK1P12685 1235 aa6.74□□□□□ -1.33
SFB3YHR098C GLC3P32775 704 aa6.74□□□□□ -1.33
SFB3YHR098C MDG1P53885 366 aa6.74□□□□□ -1.33
SFB3YHR098C AIM7Q12156 149 aa6.74□□□□□ -1.33
SFB3YHR098C YOR093CQ12275 1648 aa6.74□□□□□ -1.33
SFB3YHR098C SSA1P10591 642 aaKnown RBP6.74□□□□□ -1.33
SFB3YHR098C YKR023WP36119 530 aaKnown RBP6.74□□□□□ -1.33
SFB3YHR098C BUD21Q08492 214 aaPredicted RBP6.74□□□□□ -1.33
SFB3YHR098C HAP1P0CE41 1502 aa6.73□□□□□ -1.33
SFB3YHR098C DAL5P15365 543 aa6.73□□□□□ -1.33
SFB3YHR098C SPC42P36094 363 aa6.73□□□□□ -1.33
SFB3YHR098C OCA5P38738 679 aa6.73□□□□□ -1.33
SFB3YHR098C DSN1P40568 576 aa6.73□□□□□ -1.33
SFB3YHR098C POL32P47110 350 aa6.73□□□□□ -1.33
SFB3YHR098C RCR1P38212 213 aa6.73□□□□□ -1.33
SFB3YHR098C RKM3P38222 552 aa6.73□□□□□ -1.33
SFB3YHR098C MED8P38304 223 aa6.73□□□□□ -1.33
SFB3YHR098C ESC2Q06340 456 aa6.73□□□□□ -1.33
SFB3YHR098C LTE1P07866 1435 aa6.73□□□□□ -1.33
SFB3YHR098C BUD3P25558 1636 aa6.72□□□□□ -1.33
SFB3YHR098C DIT2P21595 489 aa6.72□□□□□ -1.33
SFB3YHR098C NMD2P38798 1089 aaKnown RBP6.72□□□□□ -1.33
SFB3YHR098C ECM1P39715 212 aa6.72□□□□□ -1.33
SFB3YHR098C HOS3Q02959 697 aaKnown RBP6.72□□□□□ -1.33
SFB3YHR098C SPO14P36126 1683 aa6.71□□□□□ -1.33
SFB3YHR098C RTG3P38165 486 aa6.71□□□□□ -1.33
SFB3YHR098C SIC1P38634 284 aa6.71□□□□□ -1.33
SFB3YHR098C CIN4P39110 191 aa6.71□□□□□ -1.33
SFB3YHR098C HAP5Q02516 242 aa6.71□□□□□ -1.33
SFB3YHR098C SRS2P12954 1174 aa6.71□□□□□ -1.34
SFB3YHR098C LTV1P34078 463 aa6.71□□□□□ -1.34
SFB3YHR098C BMS1Q08965 1183 aaKnown RBP6.71□□□□□ -1.34
SFB3YHR098C YIL092WP40497 633 aa6.7□□□□□ -1.34
SFB3YHR098C PIL1P53252 339 aaKnown RBP6.7□□□□□ -1.34
SFB3YHR098C MSH3P25336 1018 aa6.7□□□□□ -1.34
SFB3YHR098C TPO2P53283 614 aa6.7□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 6.8 ms