RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W TGL4P36165 910 aa4.59□□□□□ -1.67
CAF130YGR134W PPX1P38698 397 aa4.59□□□□□ -1.67
CAF130YGR134W NNF1P47149 201 aa4.59□□□□□ -1.67
CAF130YGR134W RPN4Q03465 531 aa4.59□□□□□ -1.67
CAF130YGR134W CWC15Q03772 175 aaKnown RBP4.59□□□□□ -1.67
CAF130YGR134W TYW1Q08960 810 aaKnown RBP4.59□□□□□ -1.67
CAF130YGR134W MIF2P35201 549 aa4.59□□□□□ -1.68
CAF130YGR134W BBC1P47068 1157 aa4.59□□□□□ -1.68
CAF130YGR134W ENO2P00925 437 aaKnown RBP4.58□□□□□ -1.68
CAF130YGR134W YFR016CP43597 1233 aaKnown RBP4.58□□□□□ -1.68
CAF130YGR134W STM1P39015 273 aaKnown RBP4.58□□□□□ -1.68
CAF130YGR134W YBL113CQ7M4S9 792 aa4.58□□□□□ -1.68
CAF130YGR134W MET4P32389 672 aa4.57□□□□□ -1.68
CAF130YGR134W PTC3P34221 468 aaKnown RBP4.57□□□□□ -1.68
CAF130YGR134W ALG12P53730 551 aa4.57□□□□□ -1.68
CAF130YGR134W PPM2Q08282 695 aa4.57□□□□□ -1.68
CAF130YGR134W YPR204WQ08995 1032 aa4.57□□□□□ -1.68
CAF130YGR134W YDJ1P25491 409 aaKnown RBP4.57□□□□□ -1.68
CAF130YGR134W YNL108CP53929 270 aa4.57□□□□□ -1.68
CAF130YGR134W RPL34AP87262 121 aaPredicted RBP4.57□□□□□ -1.68
CAF130YGR134W BRE1Q07457 700 aaKnown RBP4.57□□□□□ -1.68
CAF130YGR134W PCS60P38137 543 aaKnown RBP RIP-Chip data4.57□□□□□ -1.68 RIP-Chip
CAF130YGR134W ITT1Q04638 464 aa4.57□□□□□ -1.68
CAF130YGR134W SEC8P32855 1065 aa4.56□□□□□ -1.68
CAF130YGR134W CSE4P36012 229 aa4.56□□□□□ -1.68
CAF130YGR134W SOL3P38858 249 aa4.56□□□□□ -1.68
CAF130YGR134W CWC22P53333 577 aaKnown RBP4.56□□□□□ -1.68
CAF130YGR134W ALD3P54114 506 aa4.56□□□□□ -1.68
CAF130YGR134W SUB1P54000 292 aaKnown RBP4.56□□□□□ -1.68
CAF130YGR134W FRT1Q99332 602 aa4.56□□□□□ -1.68
CAF130YGR134W NIS1P53939 407 aa4.55□□□□□ -1.68
CAF130YGR134W MNL2Q12205 849 aa4.55□□□□□ -1.68
CAF130YGR134W YHL050CP38721 697 aa4.55□□□□□ -1.68
CAF130YGR134W YHR219WP38900 624 aa4.55□□□□□ -1.68
CAF130YGR134W SSF2Q12153 453 aaPredicted RBP4.55□□□□□ -1.68
CAF130YGR134W YEL077CQ3E7X8 1277 aa4.55□□□□□ -1.68
CAF130YGR134W RGR1P19263 1082 aa4.54□□□□□ -1.68
CAF130YGR134W TPM2P40414 161 aa4.54□□□□□ -1.68
CAF130YGR134W HST2P53686 357 aa4.54□□□□□ -1.68
CAF130YGR134W RLP24Q07915 199 aaKnown RBP4.54□□□□□ -1.68
CAF130YGR134W SEC20P28791 383 aa4.54□□□□□ -1.68
CAF130YGR134W SSD1P24276 1250 aaKnown RBP RIP-Chip data4.54□□□□□ -1.68not detected
CAF130YGR134W POL32P47110 350 aa4.54□□□□□ -1.68
CAF130YGR134W BOL3P39724 118 aa4.53□□□□□ -1.68
CAF130YGR134W RAD59Q12223 238 aa4.53□□□□□ -1.68
CAF130YGR134W RRP14P36080 434 aaKnown RBP4.53□□□□□ -1.68
CAF130YGR134W GPI13Q07830 1017 aa4.53□□□□□ -1.68
CAF130YGR134W SSN2P38931 1420 aa4.53□□□□□ -1.68
CAF130YGR134W NFU1P32860 256 aa4.52□□□□□ -1.69
CAF130YGR134W SIS2P36024 562 aa4.52□□□□□ -1.69
CAF130YGR134W BOI2P39969 1040 aa4.52□□□□□ -1.69
CAF130YGR134W VHR2P40041 505 aa4.52□□□□□ -1.69
CAF130YGR134W YOL057WQ08225 711 aa4.52□□□□□ -1.69
CAF130YGR134W SIT4P20604 311 aa4.52□□□□□ -1.69
CAF130YGR134W VMA4P22203 233 aaKnown RBP4.52□□□□□ -1.69
CAF130YGR134W SSB1P11484 613 aaKnown RBP4.51□□□□□ -1.69
CAF130YGR134W UBP12P39538 1254 aa4.51□□□□□ -1.69
CAF130YGR134W SSB2P40150 613 aaKnown RBP4.51□□□□□ -1.69
CAF130YGR134W FYV10P40492 516 aa4.51□□□□□ -1.69
CAF130YGR134W VPS16Q03308 798 aa4.51□□□□□ -1.69
CAF130YGR134W PIN2Q12057 282 aa4.51□□□□□ -1.69
CAF130YGR134W CDC11P32458 415 aa4.51□□□□□ -1.69
CAF130YGR134W TOA1P32773 286 aa4.51□□□□□ -1.69
CAF130YGR134W YMR1P47147 688 aaKnown RBP RIP-Chip data4.51□□□□□ -1.69not detected
CAF130YGR134W NSE3Q05541 303 aa4.51□□□□□ -1.69
CAF130YGR134W YBL036CP38197 257 aa4.5□□□□□ -1.69
CAF130YGR134W FPK1P53739 893 aa4.5□□□□□ -1.69
CAF130YGR134W YJU3P28321 313 aa4.5□□□□□ -1.69
CAF130YGR134W FPR3P38911 411 aaKnown RBP4.5□□□□□ -1.69
CAF130YGR134W MTO1P53070 669 aa4.5□□□□□ -1.69
CAF130YGR134W OYE2Q03558 400 aaKnown RBP4.5□□□□□ -1.69
CAF130YGR134W YDL121CQ07541 149 aa4.5□□□□□ -1.69
CAF130YGR134W RPA135P22138 1203 aaKnown RBP4.5□□□□□ -1.69
CAF130YGR134W TSR4P25040 408 aa4.5□□□□□ -1.69
CAF130YGR134W MVP1P40959 511 aaKnown RBP4.5□□□□□ -1.69
CAF130YGR134W BDF2Q07442 638 aa4.5□□□□□ -1.69
CAF130YGR134W KTR2P33550 425 aa4.49□□□□□ -1.69
CAF130YGR134W MET1P36150 593 aa4.49□□□□□ -1.69
CAF130YGR134W ATG1P53104 897 aa4.49□□□□□ -1.69
CAF130YGR134W RAD2P07276 1031 aa4.49□□□□□ -1.69
CAF130YGR134W GAL11P19659 1081 aa4.49□□□□□ -1.69
CAF130YGR134W SCJ1P25303 377 aa4.49□□□□□ -1.69
CAF130YGR134W BOI1P38041 980 aaKnown RBP4.49□□□□□ -1.69
CAF130YGR134W NAB3P38996 802 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
CAF130YGR134W YJR142WP47173 342 aa4.49□□□□□ -1.69
CAF130YGR134W PUF6Q04373 656 aaKnown RBP4.49□□□□□ -1.69
CAF130YGR134W NUT2Q06213 157 aa4.49□□□□□ -1.69
CAF130YGR134W PAF1P38351 445 aa4.48□□□□□ -1.69
CAF130YGR134W GLO3P38682 493 aaKnown RBP4.48□□□□□ -1.69
CAF130YGR134W TEA1P47988 759 aa4.48□□□□□ -1.69
CAF130YGR134W VAC8P39968 578 aa4.48□□□□□ -1.69
CAF130YGR134W IES5P40060 125 aa4.48□□□□□ -1.69
CAF130YGR134W APL6P46682 809 aa4.48□□□□□ -1.69
CAF130YGR134W YGR273CP53329 174 aa4.48□□□□□ -1.69
CAF130YGR134W DNM1P54861 757 aa4.48□□□□□ -1.69
CAF130YGR134W TCB3Q03640 1545 aaKnown RBP4.48□□□□□ -1.69
CAF130YGR134W YHR020WP38708 688 aaKnown RBP4.48□□□□□ -1.69
CAF130YGR134W PBP2P38151 413 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
CAF130YGR134W YCK3P39962 524 aa4.47□□□□□ -1.69
CAF130YGR134W TOS4Q06266 489 aa4.47□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 165.7 ms