RNA–Protein interactions for RNA: YGR119C

NUP57, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP57, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP57YGR119C TY1B-DR3Q99231 1755 aa10.21□□□□□ -0.78
NUP57YGR119C TY1B-HO13535 1793 aa10.2□□□□□ -0.78
NUP57YGR119C TY1B-DR5P0C2I2 1755 aa10.2□□□□□ -0.78
NUP57YGR119C TY1B-DR6P0C2I3 1755 aa10.2□□□□□ -0.78
NUP57YGR119C TY1B-LR2P0C2I5 1755 aa10.2□□□□□ -0.78
NUP57YGR119C TY1B-LR3P0C2I6 1755 aaKnown RBP10.2□□□□□ -0.78
NUP57YGR119C TY1B-PR1P0C2I9 1755 aaKnown RBP10.2□□□□□ -0.78
NUP57YGR119C TY1B-PR2P0C2J0 1756 aa10.2□□□□□ -0.78
NUP57YGR119C TY1B-PR3P0C2J1 1755 aaKnown RBP10.2□□□□□ -0.78
NUP57YGR119C TY1B-JR1P47098 1755 aa10.2□□□□□ -0.78
NUP57YGR119C TY1B-ML2Q03434 1755 aaKnown RBP10.2□□□□□ -0.78
NUP57YGR119C TY1B-ER1Q03612 1755 aa10.2□□□□□ -0.78
NUP57YGR119C TY1B-ML1Q04711 1755 aaKnown RBP10.2□□□□□ -0.78
NUP57YGR119C TY1B-GR2Q12269 1755 aa10.2□□□□□ -0.78
NUP57YGR119C TY1B-OLQ12273 1755 aa10.2□□□□□ -0.78
NUP57YGR119C TY1B-PLQ12414 1755 aaKnown RBP10.2□□□□□ -0.78
NUP57YGR119C NUP170P38181 1502 aa10.2□□□□□ -0.78
NUP57YGR119C PTC4P38089 393 aa10.19□□□□□ -0.78
NUP57YGR119C SLI15P38283 698 aa10.19□□□□□ -0.78
NUP57YGR119C GUA1P38625 525 aaKnown RBP10.19□□□□□ -0.78
NUP57YGR119C TIF11P38912 153 aaKnown RBP10.19□□□□□ -0.78
NUP57YGR119C STH1P32597 1359 aa10.19□□□□□ -0.78
NUP57YGR119C ULI1P43604 169 aa10.18□□□□□ -0.78
NUP57YGR119C RPA190P10964 1664 aaKnown RBP10.18□□□□□ -0.78
NUP57YGR119C SPP1Q03012 353 aa10.18□□□□□ -0.78
NUP57YGR119C UBP9P39967 754 aa10.17□□□□□ -0.78
NUP57YGR119C MLP2P40457 1679 aa10.16□□□□□ -0.78
NUP57YGR119C JIP4Q03361 876 aa10.15□□□□□ -0.79
NUP57YGR119C PDR15Q04182 1529 aaKnown RBP10.14□□□□□ -0.79
NUP57YGR119C LTE1P07866 1435 aa10.14□□□□□ -0.79
NUP57YGR119C SPP41P38904 1435 aa10.12□□□□□ -0.79
NUP57YGR119C RGR1P19263 1082 aa10.11□□□□□ -0.79
NUP57YGR119C IOC2Q12072 812 aa10.11□□□□□ -0.79
NUP57YGR119C TEA1P47988 759 aa10.11□□□□□ -0.79
NUP57YGR119C MVP1P40959 511 aaKnown RBP10.1□□□□□ -0.79
NUP57YGR119C ULS1Q08562 1619 aa10.1□□□□□ -0.79
NUP57YGR119C SSM4P40318 1319 aa10.09□□□□□ -0.79
NUP57YGR119C GAP1P19145 602 aaPredicted RBP10.09□□□□□ -0.79
NUP57YGR119C CDC73Q06697 393 aa10.09□□□□□ -0.79
NUP57YGR119C GEA1P47102 1408 aaPredicted RBP10.09□□□□□ -0.79
NUP57YGR119C RPP1BP10622 106 aaKnown RBP10.08□□□□□ -0.8
NUP57YGR119C HGH1P48362 394 aaKnown RBP10.08□□□□□ -0.8
NUP57YGR119C YNL035CP53962 389 aaKnown RBP10.06□□□□□ -0.8
NUP57YGR119C HPC2Q01448 625 aa10.06□□□□□ -0.8
NUP57YGR119C CSC1Q06538 782 aa10.06□□□□□ -0.8
NUP57YGR119C LDB19Q12502 818 aa10.05□□□□□ -0.8
NUP57YGR119C MID1P41821 548 aa10.04□□□□□ -0.8
NUP57YGR119C PML39Q03760 334 aa10.04□□□□□ -0.8
NUP57YGR119C BNI1P41832 1953 aa10.04□□□□□ -0.8
NUP57YGR119C CLB5P30283 435 aa10.04□□□□□ -0.8
NUP57YGR119C CSN12P47130 423 aa10.04□□□□□ -0.8
NUP57YGR119C GEA2P39993 1459 aaKnown RBP10.03□□□□□ -0.8
NUP57YGR119C TFB3Q03290 321 aa10.03□□□□□ -0.8
NUP57YGR119C RLF2Q12495 606 aa10.02□□□□□ -0.81
NUP57YGR119C VTH1P40438 1549 aa10.02□□□□□ -0.81
NUP57YGR119C VTH2P40890 1549 aa10.02□□□□□ -0.81
NUP57YGR119C SSA2P10592 639 aaKnown RBP10.01□□□□□ -0.81
NUP57YGR119C RTG1P32607 177 aa10.01□□□□□ -0.81
NUP57YGR119C YPR109WQ06104 294 aa10□□□□□ -0.81
NUP57YGR119C TY3B-GQ99315 1547 aa10□□□□□ -0.81
NUP57YGR119C TSC11P40061 1430 aa10□□□□□ -0.81
NUP57YGR119C TFB4Q12004 338 aa10□□□□□ -0.81
NUP57YGR119C YRF1-1P0CX20 1796 aa9.99□□□□□ -0.81
NUP57YGR119C YRF1-5P0CX21 1796 aa9.99□□□□□ -0.81
NUP57YGR119C YRF1-8P0CX22 1796 aa9.99□□□□□ -0.81
NUP57YGR119C TY1B-JR2P47100 1755 aaKnown RBP9.99□□□□□ -0.81
NUP57YGR119C TY1B-ER2Q03619 1755 aa9.99□□□□□ -0.81
NUP57YGR119C TY1B-MR1Q04214 1755 aa9.99□□□□□ -0.81
NUP57YGR119C TY1B-MR2Q04670 1755 aaKnown RBP9.99□□□□□ -0.81
NUP57YGR119C TY1B-LR1Q12088 1755 aaKnown RBP9.99□□□□□ -0.81
NUP57YGR119C TY1B-NL1Q12112 1755 aa9.99□□□□□ -0.81
NUP57YGR119C TY1B-GR1Q12141 1755 aa9.99□□□□□ -0.81
NUP57YGR119C TY1B-BLQ12490 1755 aa9.99□□□□□ -0.81
NUP57YGR119C PEX21P50091 288 aa9.99□□□□□ -0.81
NUP57YGR119C MPC54Q08550 464 aa9.99□□□□□ -0.81
NUP57YGR119C NIS1P53939 407 aa9.98□□□□□ -0.81
NUP57YGR119C DPL1Q05567 589 aa9.98□□□□□ -0.81
NUP57YGR119C KTR1P27810 393 aaKnown RBP9.97□□□□□ -0.81
NUP57YGR119C SEC61P32915 480 aa9.97□□□□□ -0.81
NUP57YGR119C BRL1P38770 471 aa9.97□□□□□ -0.81
NUP57YGR119C NTE1Q04958 1679 aa9.97□□□□□ -0.81
NUP57YGR119C TYW1Q08960 810 aaKnown RBP9.96□□□□□ -0.81
NUP57YGR119C TUM1Q08686 304 aaKnown RBP9.96□□□□□ -0.82
NUP57YGR119C SNT2P53127 1403 aa9.95□□□□□ -0.82
NUP57YGR119C NUP159P40477 1460 aa9.95□□□□□ -0.82
NUP57YGR119C PEX29Q03370 554 aa9.94□□□□□ -0.82
NUP57YGR119C YMR196WQ04336 1088 aa9.94□□□□□ -0.82
NUP57YGR119C PKC1P24583 1151 aa9.93□□□□□ -0.82
NUP57YGR119C FPK1P53739 893 aa9.93□□□□□ -0.82
NUP57YGR119C ITT1Q04638 464 aa9.93□□□□□ -0.82
NUP57YGR119C RPO21P04050 1733 aaKnown RBP9.92□□□□□ -0.82
NUP57YGR119C VPS15P22219 1454 aa9.9□□□□□ -0.82
NUP57YGR119C YBT1P32386 1661 aa9.9□□□□□ -0.83
NUP57YGR119C GLN1P32288 370 aaKnown RBP9.89□□□□□ -0.83
NUP57YGR119C TFG1P41895 735 aaPredicted RBP9.89□□□□□ -0.83
NUP57YGR119C HST2P53686 357 aa9.89□□□□□ -0.83
NUP57YGR119C YRR1Q12172 810 aa9.89□□□□□ -0.83
NUP57YGR119C NCR1Q12200 1170 aa9.89□□□□□ -0.83
NUP57YGR119C BUD31P25337 157 aaPredicted RBP9.88□□□□□ -0.83
NUP57YGR119C ISU2Q12056 156 aa9.88□□□□□ -0.83
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms