RNA–Protein interactions for RNA: YGL120C

PRP43, Transcript of RNA helicase in the DEAH-box family, yeastyeast

Gene PRP43, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP43YGL120C SRP54P20424 541 aaKnown RBP5.62□□□□□ -1.51
PRP43YGL120C SEC27P41811 889 aaKnown RBP5.62□□□□□ -1.51
PRP43YGL120C ERV41Q04651 352 aa5.62□□□□□ -1.51
PRP43YGL120C GGA1Q06336 557 aa5.62□□□□□ -1.51
PRP43YGL120C BUD21Q08492 214 aaPredicted RBP5.62□□□□□ -1.51
PRP43YGL120C GLE1Q12315 538 aa5.62□□□□□ -1.51
PRP43YGL120C NPR3P38742 1146 aa5.61□□□□□ -1.51
PRP43YGL120C TY4A-JP47023 414 aa5.61□□□□□ -1.51
PRP43YGL120C BRE1Q07457 700 aaKnown RBP5.61□□□□□ -1.51
PRP43YGL120C UBP9P39967 754 aa5.6□□□□□ -1.51
PRP43YGL120C SSA4P22202 642 aaKnown RBP5.6□□□□□ -1.51
PRP43YGL120C GEF1P37020 779 aa5.6□□□□□ -1.51
PRP43YGL120C BMS1Q08965 1183 aaKnown RBP5.6□□□□□ -1.51
PRP43YGL120C NFI1Q12216 726 aa5.6□□□□□ -1.51
PRP43YGL120C CLF1Q12309 687 aaPredicted RBP5.6□□□□□ -1.51
PRP43YGL120C RAD2P07276 1031 aa5.59□□□□□ -1.51
PRP43YGL120C RPC31P17890 251 aa5.59□□□□□ -1.51
PRP43YGL120C ZDS1P50111 915 aaKnown RBP5.59□□□□□ -1.51
PRP43YGL120C SYH1Q02875 849 aaKnown RBP5.59□□□□□ -1.51
PRP43YGL120C YOR389WQ08912 624 aa5.59□□□□□ -1.51
PRP43YGL120C PDR1P12383 1068 aa5.59□□□□□ -1.51
PRP43YGL120C YPP1P46951 817 aa5.59□□□□□ -1.51
PRP43YGL120C FAR11P53917 953 aa5.59□□□□□ -1.51
PRP43YGL120C TAF1P46677 1066 aa5.58□□□□□ -1.52
PRP43YGL120C PSK2Q08217 1101 aa5.58□□□□□ -1.52
PRP43YGL120C CFT1Q06632 1357 aaKnown RBP5.58□□□□□ -1.52
PRP43YGL120C SWI3P32591 825 aa5.58□□□□□ -1.52
PRP43YGL120C POL5P39985 1022 aaKnown RBP5.58□□□□□ -1.52
PRP43YGL120C ROX1P25042 368 aa5.57□□□□□ -1.52
PRP43YGL120C PHO87P25360 923 aa5.57□□□□□ -1.52
PRP43YGL120C RPL5P26321 297 aaKnown RBP5.57□□□□□ -1.52
PRP43YGL120C MED8P38304 223 aa5.57□□□□□ -1.52
PRP43YGL120C BDP1P46678 594 aa5.57□□□□□ -1.52
PRP43YGL120C LSP1Q12230 341 aaKnown RBP5.57□□□□□ -1.52
PRP43YGL120C MEH1Q02205 184 aa5.57□□□□□ -1.52
PRP43YGL120C GDE1Q02979 1223 aa5.57□□□□□ -1.52
PRP43YGL120C KAR3P17119 729 aa5.56□□□□□ -1.52
PRP43YGL120C SPB4P25808 606 aaPredicted RBP5.56□□□□□ -1.52
PRP43YGL120C GCD6P32501 712 aaKnown RBP5.56□□□□□ -1.52
PRP43YGL120C ZUO1P32527 433 aaKnown RBP5.56□□□□□ -1.52
PRP43YGL120C AIM21P40563 679 aa5.56□□□□□ -1.52
PRP43YGL120C RRB1Q04225 511 aaKnown RBP5.56□□□□□ -1.52
PRP43YGL120C NDL1Q06568 189 aa5.56□□□□□ -1.52
PRP43YGL120C SSN2P38931 1420 aa5.55□□□□□ -1.52
PRP43YGL120C CLN1P20437 546 aa5.55□□□□□ -1.52
PRP43YGL120C TPS3P38426 1054 aaKnown RBP5.55□□□□□ -1.52
PRP43YGL120C ECM1P39715 212 aa5.55□□□□□ -1.52
PRP43YGL120C JJJ1P53863 590 aa5.55□□□□□ -1.52
PRP43YGL120C ARR1Q06596 294 aa5.55□□□□□ -1.52
PRP43YGL120C MDM38Q08179 573 aa5.55□□□□□ -1.52
PRP43YGL120C PSO2P30620 661 aa5.54□□□□□ -1.52
PRP43YGL120C PUP2P32379 260 aa5.54□□□□□ -1.52
PRP43YGL120C PTP3P40048 928 aa5.54□□□□□ -1.52
PRP43YGL120C ITC1P53125 1264 aa5.54□□□□□ -1.52
PRP43YGL120C VPS30Q02948 557 aa5.54□□□□□ -1.52
PRP43YGL120C GIR2Q03768 265 aaPredicted RBP5.54□□□□□ -1.52
PRP43YGL120C PSR1Q07800 427 aa5.54□□□□□ -1.52
PRP43YGL120C CLB1P24868 471 aa5.54□□□□□ -1.52
PRP43YGL120C SSF1P38789 453 aaPredicted RBP5.54□□□□□ -1.52
PRP43YGL120C YIL055CP40523 627 aaKnown RBP5.54□□□□□ -1.52
PRP43YGL120C MGA2P40578 1113 aa5.54□□□□□ -1.52
PRP43YGL120C YJR008WP47085 338 aa5.54□□□□□ -1.52
PRP43YGL120C DSF2P38213 736 aa5.53□□□□□ -1.52
PRP43YGL120C LAM1P38851 1228 aa5.53□□□□□ -1.52
PRP43YGL120C NMD3P38861 518 aaKnown RBP5.53□□□□□ -1.52
PRP43YGL120C CHZ1P40019 153 aaPredicted RBP5.53□□□□□ -1.52
PRP43YGL120C TFG1P41895 735 aaPredicted RBP5.53□□□□□ -1.52
PRP43YGL120C COG8Q04632 607 aa5.53□□□□□ -1.52
PRP43YGL120C SLN1P39928 1220 aaPredicted RBP5.53□□□□□ -1.52
PRP43YGL120C HOS2P53096 452 aaPredicted RBP5.53□□□□□ -1.52
PRP43YGL120C BRF1P29056 596 aa5.52□□□□□ -1.53
PRP43YGL120C EPS1P40557 701 aa5.52□□□□□ -1.53
PRP43YGL120C RSC1P53236 928 aa5.52□□□□□ -1.53
PRP43YGL120C HEL2Q05580 639 aaKnown RBP5.52□□□□□ -1.53
PRP43YGL120C RIX7Q07844 837 aaKnown RBP5.52□□□□□ -1.53
PRP43YGL120C GAL11P19659 1081 aa5.51□□□□□ -1.53
PRP43YGL120C YPR172WQ06608 200 aa5.51□□□□□ -1.53
PRP43YGL120C THR4P16120 514 aaKnown RBP5.51□□□□□ -1.53
PRP43YGL120C BDF1P35817 686 aa5.51□□□□□ -1.53
PRP43YGL120C PXR1P53335 271 aaPredicted RBP5.51□□□□□ -1.53
PRP43YGL120C YNL247WP53852 767 aaKnown RBP5.51□□□□□ -1.53
PRP43YGL120C BNI4P53858 892 aa5.51□□□□□ -1.53
PRP43YGL120C SPC42P36094 363 aa5.5□□□□□ -1.53
PRP43YGL120C NOP7P53261 605 aaKnown RBP5.5□□□□□ -1.53
PRP43YGL120C BNI5P53890 448 aaKnown RBP5.5□□□□□ -1.53
PRP43YGL120C RNT1Q02555 471 aa5.5□□□□□ -1.53
PRP43YGL120C RRP9Q06506 573 aaKnown RBP5.5□□□□□ -1.53
PRP43YGL120C KEX2P13134 814 aa5.49□□□□□ -1.53
PRP43YGL120C CCM1P48237 864 aaPredicted RBP5.49□□□□□ -1.53
PRP43YGL120C BTN2P53286 410 aa5.49□□□□□ -1.53
PRP43YGL120C RIA1P53893 1110 aa5.49□□□□□ -1.53
PRP43YGL120C VTC3Q02725 835 aa5.49□□□□□ -1.53
PRP43YGL120C YML020WQ03722 664 aa5.49□□□□□ -1.53
PRP43YGL120C ORM2Q06144 216 aa5.49□□□□□ -1.53
PRP43YGL120C RSC2Q06488 889 aa5.49□□□□□ -1.53
PRP43YGL120C SWI6P09959 803 aa5.49□□□□□ -1.53
PRP43YGL120C UBP1P25037 809 aa5.49□□□□□ -1.53
PRP43YGL120C NOT3P06102 836 aaKnown RBP5.48□□□□□ -1.53
PRP43YGL120C EFB1P32471 206 aaKnown RBP5.48□□□□□ -1.53
PRP43YGL120C SEC6P32844 805 aa5.48□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms