RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	PDR12	Q02785	1511 aa		5.38	□□□□□ -1.55
UPC2	YDR213W	YLR419W	Q06698	1435 aa	Known RBP	5.38	□□□□□ -1.55
UPC2	YDR213W	AI2	P03876	854 aa		5.38	□□□□□ -1.55
UPC2	YDR213W	SNF7	P39929	240 aa	Known RBP	5.37	□□□□□ -1.55
UPC2	YDR213W	NOP7	P53261	605 aa	Known RBP	5.37	□□□□□ -1.55
UPC2	YDR213W	CDC27	P38042	758 aa		5.37	□□□□□ -1.55
UPC2	YDR213W	PDS5	Q04264	1277 aa		5.36	□□□□□ -1.55
UPC2	YDR213W	ULS1	Q08562	1619 aa		5.36	□□□□□ -1.55
UPC2	YDR213W	ARO1	P08566	1588 aa	Known RBP	5.36	□□□□□ -1.55
UPC2	YDR213W	MHP1	P43638	1398 aa		5.35	□□□□□ -1.55
UPC2	YDR213W	SET1	P38827	1080 aa	Known RBP	5.35	□□□□□ -1.55
UPC2	YDR213W	FPR3	P38911	411 aa	Known RBP	5.35	□□□□□ -1.55
UPC2	YDR213W	RVB2	Q12464	471 aa	Known RBP	5.35	□□□□□ -1.55
UPC2	YDR213W	TY3B-G	Q99315	1547 aa		5.35	□□□□□ -1.55
UPC2	YDR213W	YRB30	P53107	440 aa	Predicted RBP	5.34	□□□□□ -1.55
UPC2	YDR213W	ROX1	P25042	368 aa		5.34	□□□□□ -1.55
UPC2	YDR213W	BCH2	P36122	765 aa		5.34	□□□□□ -1.55
UPC2	YDR213W	CKB1	P43639	278 aa		5.33	□□□□□ -1.56
UPC2	YDR213W	EDE1	P34216	1381 aa		5.33	□□□□□ -1.56
UPC2	YDR213W	SLN1	P39928	1220 aa	Predicted RBP	5.32	□□□□□ -1.56
UPC2	YDR213W	URN1	Q06525	465 aa	Known RBP	5.32	□□□□□ -1.56
UPC2	YDR213W	GLN1	P32288	370 aa	Known RBP	5.31	□□□□□ -1.56
UPC2	YDR213W	VPS70	P47161	811 aa		5.31	□□□□□ -1.56
UPC2	YDR213W	HAA1	Q12753	694 aa	Known RBP	5.31	□□□□□ -1.56
UPC2	YDR213W	YPP1	P46951	817 aa		5.31	□□□□□ -1.56
UPC2	YDR213W	CTR9	P89105	1077 aa		5.31	□□□□□ -1.56
UPC2	YDR213W	KIP3	P53086	805 aa	Known RBP	5.3	□□□□□ -1.56
UPC2	YDR213W	RLF2	Q12495	606 aa		5.29	□□□□□ -1.56
UPC2	YDR213W	PCT1	P13259	424 aa		5.29	□□□□□ -1.56
UPC2	YDR213W	DSF2	P38213	736 aa		5.28	□□□□□ -1.56
UPC2	YDR213W	NAP1	P25293	417 aa	Known RBP	5.28	□□□□□ -1.56
UPC2	YDR213W	PAF1	P38351	445 aa		5.27	□□□□□ -1.57
UPC2	YDR213W	CWC22	P53333	577 aa	Known RBP	5.27	□□□□□ -1.57
UPC2	YDR213W	SPB4	P25808	606 aa	Predicted RBP	5.27	□□□□□ -1.57
UPC2	YDR213W	TAF5	P38129	798 aa		5.27	□□□□□ -1.57
UPC2	YDR213W	YCK3	P39962	524 aa		5.27	□□□□□ -1.57
UPC2	YDR213W	VPS27	P40343	622 aa	Known RBP	5.27	□□□□□ -1.57
UPC2	YDR213W	YDL144C	Q07589	356 aa		5.27	□□□□□ -1.57
UPC2	YDR213W	CDC45	Q08032	650 aa		5.26	□□□□□ -1.57
UPC2	YDR213W	IQG1	Q12280	1495 aa		5.26	□□□□□ -1.57
UPC2	YDR213W	KNS1	P32350	737 aa	Predicted RBP	5.26	□□□□□ -1.57
UPC2	YDR213W	MRM1	P25270	412 aa		5.25	□□□□□ -1.57
UPC2	YDR213W	BUD21	Q08492	214 aa	Predicted RBP	5.25	□□□□□ -1.57
UPC2	YDR213W	ARL1	P38116	183 aa	Known RBP	5.24	□□□□□ -1.57
UPC2	YDR213W	SUI2	P20459	304 aa	Known RBP	5.24	□□□□□ -1.57
UPC2	YDR213W	RAD26	P40352	1085 aa		5.24	□□□□□ -1.57
UPC2	YDR213W	YGR130C	P53278	816 aa		5.24	□□□□□ -1.57
UPC2	YDR213W	YBT1	P32386	1661 aa		5.24	□□□□□ -1.57
UPC2	YDR213W	KIN1	P13185	1064 aa		5.23	□□□□□ -1.57
UPC2	YDR213W	MPP10	P47083	593 aa	Known RBP	5.23	□□□□□ -1.57
UPC2	YDR213W	VTH1	P40438	1549 aa		5.23	□□□□□ -1.57
UPC2	YDR213W	VTH2	P40890	1549 aa		5.23	□□□□□ -1.57
UPC2	YDR213W	MSP1	P28737	362 aa		5.22	□□□□□ -1.57
UPC2	YDR213W	EPS1	P40557	701 aa		5.22	□□□□□ -1.57
UPC2	YDR213W	YIR014W	P40570	242 aa		5.22	□□□□□ -1.57
UPC2	YDR213W	IML1	P47170	1584 aa		5.22	□□□□□ -1.57
UPC2	YDR213W	GCN2	P15442	1659 aa		5.22	□□□□□ -1.57
UPC2	YDR213W	DAL5	P15365	543 aa		5.22	□□□□□ -1.57
UPC2	YDR213W	NUP42	P49686	430 aa	Known RBP	5.22	□□□□□ -1.57
UPC2	YDR213W	YGL081W	P53156	320 aa		5.22	□□□□□ -1.57
UPC2	YDR213W	BNR1	P40450	1375 aa		5.22	□□□□□ -1.57
UPC2	YDR213W	TRK1	P12685	1235 aa		5.21	□□□□□ -1.58
UPC2	YDR213W	BDF1	P35817	686 aa		5.21	□□□□□ -1.58
UPC2	YDR213W	GUA1	P38625	525 aa	Known RBP	5.21	□□□□□ -1.58
UPC2	YDR213W	PBS2	P08018	668 aa		5.21	□□□□□ -1.58
UPC2	YDR213W	DIT2	P21595	489 aa		5.21	□□□□□ -1.58
UPC2	YDR213W	VPS24	P36095	224 aa	Known RBP	5.21	□□□□□ -1.58
UPC2	YDR213W	RTG3	P38165	486 aa		5.21	□□□□□ -1.58
UPC2	YDR213W	YMR196W	Q04336	1088 aa		5.21	□□□□□ -1.58
UPC2	YDR213W	BCK1	Q01389	1478 aa		5.21	□□□□□ -1.58
UPC2	YDR213W	YRF1-2	P40105	1681 aa		5.2	□□□□□ -1.58
UPC2	YDR213W	SSA1	P10591	642 aa	Known RBP	5.2	□□□□□ -1.58
UPC2	YDR213W	NOP58	Q12499	511 aa	Known RBP	5.2	□□□□□ -1.58
UPC2	YDR213W	GLC3	P32775	704 aa		5.2	□□□□□ -1.58
UPC2	YDR213W	SWE1	P32944	819 aa		5.2	□□□□□ -1.58
UPC2	YDR213W	RRD1	P40454	393 aa	Known RBP	5.2	□□□□□ -1.58
UPC2	YDR213W	USO1	P25386	1790 aa		5.2	□□□□□ -1.58
UPC2	YDR213W	MAK11	P20484	414 aa	Known RBP	5.19	□□□□□ -1.58
UPC2	YDR213W	VPS29	P38759	282 aa		5.19	□□□□□ -1.58
UPC2	YDR213W	QCR6	P00127	147 aa		5.19	□□□□□ -1.58
UPC2	YDR213W	TEA1	P47988	759 aa		5.18	□□□□□ -1.58
UPC2	YDR213W	MDG1	P53885	366 aa		5.18	□□□□□ -1.58
UPC2	YDR213W	NOT3	P06102	836 aa	Known RBP	5.18	□□□□□ -1.58
UPC2	YDR213W	PDR5	P33302	1511 aa	Known RBP	5.17	□□□□□ -1.58
UPC2	YDR213W	RPP0	P05317	312 aa	Known RBP	5.17	□□□□□ -1.58
UPC2	YDR213W	CLB5	P30283	435 aa		5.17	□□□□□ -1.58
UPC2	YDR213W	YNR021W	P53723	404 aa	Known RBP	5.17	□□□□□ -1.58
UPC2	YDR213W	RNA1	P11745	407 aa	Known RBP	5.16	□□□□□ -1.58
UPC2	YDR213W	ENV11	P53246	860 aa		5.16	□□□□□ -1.58
UPC2	YDR213W	RAD2	P07276	1031 aa		5.16	□□□□□ -1.58
UPC2	YDR213W	EDS1	P38073	919 aa		5.15	□□□□□ -1.58
UPC2	YDR213W	POL32	P47110	350 aa		5.15	□□□□□ -1.58
UPC2	YDR213W	PUF6	Q04373	656 aa	Known RBP	5.15	□□□□□ -1.58
UPC2	YDR213W	VMR1	P38735	1592 aa		5.15	□□□□□ -1.58
UPC2	YDR213W	MRPL32	P25348	183 aa		5.15	□□□□□ -1.59
UPC2	YDR213W	RSC1	P53236	928 aa		5.15	□□□□□ -1.59
UPC2	YDR213W	NUP157	P40064	1391 aa	Known RBP	5.15	□□□□□ -1.59
UPC2	YDR213W	YEF3	P16521	1044 aa	Known RBP	5.14	□□□□□ -1.59
UPC2	YDR213W	COQ8	P27697	501 aa		5.14	□□□□□ -1.59
UPC2	YDR213W	CSE4	P36012	229 aa		5.14	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 64.3 ms