RNA–Protein interactions for RNA: YDR170C

SEC7, Transcript of Guanine nucleotide exchange factor (GEF) for ADP ribosylation factors, yeast

Gene SEC7, Length 6,030 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC7	YDR170C	SUI2	P20459	304 aa	Known RBP	3.22	□□□□□ -1.89
SEC7	YDR170C	ROX1	P25042	368 aa		3.22	□□□□□ -1.89
SEC7	YDR170C	TIM50	Q02776	476 aa		3.22	□□□□□ -1.89
SEC7	YDR170C	CAJ1	P39101	391 aa		3.21	□□□□□ -1.9
SEC7	YDR170C	BBC1	P47068	1157 aa		3.21	□□□□□ -1.9
SEC7	YDR170C	ECM16	Q04217	1267 aa	Known RBP	3.21	□□□□□ -1.9
SEC7	YDR170C	ECM5	Q03214	1411 aa		3.21	□□□□□ -1.9
SEC7	YDR170C	RRP8	P38961	392 aa	Known RBP	3.21	□□□□□ -1.9
SEC7	YDR170C	TRP5	P00931	707 aa	Known RBP	3.21	□□□□□ -1.9
SEC7	YDR170C	RIA1	P53893	1110 aa		3.21	□□□□□ -1.9
SEC7	YDR170C	VPS20	Q04272	221 aa		3.21	□□□□□ -1.9
SEC7	YDR170C	TSR3	Q12094	313 aa	Known RBP	3.21	□□□□□ -1.9
SEC7	YDR170C	TOP1	P04786	769 aa		3.21	□□□□□ -1.9
SEC7	YDR170C	SMC3	P47037	1230 aa		3.21	□□□□□ -1.9
SEC7	YDR170C	PBY1	P38254	753 aa		3.2	□□□□□ -1.9
SEC7	YDR170C	SSA2	P10592	639 aa	Known RBP	3.2	□□□□□ -1.9
SEC7	YDR170C	YPR097W	Q06839	1073 aa		3.2	□□□□□ -1.9
SEC7	YDR170C	TLG2	Q08144	397 aa		3.2	□□□□□ -1.9
SEC7	YDR170C	ABP1	P15891	592 aa	Known RBP	3.2	□□□□□ -1.9
SEC7	YDR170C	STM1	P39015	273 aa	Known RBP	3.2	□□□□□ -1.9
SEC7	YDR170C	NKP2	Q06162	153 aa		3.2	□□□□□ -1.9
SEC7	YDR170C	RRI2	Q12348	645 aa		3.2	□□□□□ -1.9
SEC7	YDR170C	TRK1	P12685	1235 aa		3.2	□□□□□ -1.9
SEC7	YDR170C	RGP1	P16664	663 aa		3.2	□□□□□ -1.9
SEC7	YDR170C	TPM1	P17536	199 aa	Known RBP	3.2	□□□□□ -1.9
SEC7	YDR170C	MET10	P39692	1035 aa		3.2	□□□□□ -1.9
SEC7	YDR170C	RCM1	P53972	490 aa		3.2	□□□□□ -1.9
SEC7	YDR170C	RNT1	Q02555	471 aa		3.2	□□□□□ -1.9
SEC7	YDR170C	NKP1	Q12493	238 aa		3.2	□□□□□ -1.9
SEC7	YDR170C	SCC2	Q04002	1493 aa		3.19	□□□□□ -1.9
SEC7	YDR170C	MSP1	P28737	362 aa		3.19	□□□□□ -1.9
SEC7	YDR170C	POL32	P47110	350 aa		3.19	□□□□□ -1.9
SEC7	YDR170C	ENP2	P48234	707 aa	Known RBP	3.19	□□□□□ -1.9
SEC7	YDR170C	IMP2'	P32351	346 aa		3.19	□□□□□ -1.9
SEC7	YDR170C	BUD6	P41697	788 aa		3.19	□□□□□ -1.9
SEC7	YDR170C	RPS0B	P46654	252 aa	Known RBP	3.19	□□□□□ -1.9
SEC7	YDR170C	ZDS1	P50111	915 aa	Known RBP	3.19	□□□□□ -1.9
SEC7	YDR170C	TSC11	P40061	1430 aa		3.19	□□□□□ -1.9
SEC7	YDR170C	RNR2	P09938	399 aa	Known RBP	3.19	□□□□□ -1.9
SEC7	YDR170C	STO1	P34160	861 aa	Known RBP	3.19	□□□□□ -1.9
SEC7	YDR170C	HUL5	P53119	910 aa		3.19	□□□□□ -1.9
SEC7	YDR170C	PIL1	P53252	339 aa	Known RBP	3.19	□□□□□ -1.9
SEC7	YDR170C	RAD50	P12753	1312 aa		3.19	□□□□□ -1.9
SEC7	YDR170C	PDI1	P17967	522 aa	Known RBP	3.19	□□□□□ -1.9
SEC7	YDR170C	TCD1	P38756	429 aa		3.19	□□□□□ -1.9
SEC7	YDR170C	HOS3	Q02959	697 aa	Known RBP	3.19	□□□□□ -1.9
SEC7	YDR170C	TRS33	Q99394	268 aa		3.19	□□□□□ -1.9
SEC7	YDR170C	SWR1	Q05471	1514 aa		3.19	□□□□□ -1.9
SEC7	YDR170C	HSP104	P31539	908 aa	Known RBP	3.18	□□□□□ -1.9
SEC7	YDR170C	DLD1	P32891	587 aa		3.18	□□□□□ -1.9
SEC7	YDR170C	SRC1	Q03707	834 aa		3.18	□□□□□ -1.9
SEC7	YDR170C	RRB1	Q04225	511 aa	Known RBP	3.18	□□□□□ -1.9
SEC7	YDR170C	NBL1	Q3E7Y6	73 aa		3.18	□□□□□ -1.9
SEC7	YDR170C	TSR2	Q06672	205 aa	Known RBP	3.18	□□□□□ -1.9
SEC7	YDR170C	PDR18	P53756	1333 aa		3.18	□□□□□ -1.9
SEC7	YDR170C	SPT21	P35209	758 aa		3.18	□□□□□ -1.9
SEC7	YDR170C	CEF1	Q03654	590 aa	Predicted RBP	3.18	□□□□□ -1.9
SEC7	YDR170C	GIR2	Q03768	265 aa	Predicted RBP	3.18	□□□□□ -1.9
SEC7	YDR170C	HCR1	Q05775	265 aa	Known RBP	3.18	□□□□□ -1.9
SEC7	YDR170C	GEA1	P47102	1408 aa	Predicted RBP	3.18	□□□□□ -1.9
SEC7	YDR170C	FYV8	P46949	817 aa	Known RBP	3.18	□□□□□ -1.9
SEC7	YDR170C	RLP24	Q07915	199 aa	Known RBP	3.18	□□□□□ -1.9
SEC7	YDR170C	MCM2	P29469	868 aa		3.17	□□□□□ -1.9
SEC7	YDR170C	LAM1	P38851	1228 aa		3.17	□□□□□ -1.9
SEC7	YDR170C	MSH4	P40965	878 aa	Predicted RBP	3.17	□□□□□ -1.9
SEC7	YDR170C	MSB4	Q12317	492 aa		3.17	□□□□□ -1.9
SEC7	YDR170C	CDC15	P27636	974 aa		3.17	□□□□□ -1.9
SEC7	YDR170C	SWC3	P31376	625 aa		3.17	□□□□□ -1.9
SEC7	YDR170C	RIX1	P38883	763 aa	Predicted RBP	3.17	□□□□□ -1.9
SEC7	YDR170C	SEC27	P41811	889 aa	Known RBP	3.17	□□□□□ -1.9
SEC7	YDR170C	MDM38	Q08179	573 aa		3.17	□□□□□ -1.9
SEC7	YDR170C	PLP2	Q12017	286 aa		3.17	□□□□□ -1.9
SEC7	YDR170C	HSP82	P02829	709 aa	Known RBP	3.17	□□□□□ -1.9
SEC7	YDR170C	SSE1	P32589	693 aa	Known RBP	3.17	□□□□□ -1.9
SEC7	YDR170C	LTV1	P34078	463 aa		3.17	□□□□□ -1.9
SEC7	YDR170C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
SEC7	YDR170C	VID28	P40547	921 aa		3.17	□□□□□ -1.9
SEC7	YDR170C	ETT1	Q08421	412 aa	Known RBP	3.17	□□□□□ -1.9
SEC7	YDR170C	CTI6	Q08923	506 aa		3.17	□□□□□ -1.9
SEC7	YDR170C	RTP1	Q12751	981 aa		3.17	□□□□□ -1.9
SEC7	YDR170C	RRP14	P36080	434 aa	Known RBP	3.17	□□□□□ -1.9
SEC7	YDR170C	BPT1	P14772	1559 aa		3.17	□□□□□ -1.9
SEC7	YDR170C	RPS24A	P0CX31	135 aa	Known RBP	3.17	□□□□□ -1.9
SEC7	YDR170C	RPS24B	P0CX32	135 aa	Known RBP	3.17	□□□□□ -1.9
SEC7	YDR170C	VMA4	P22203	233 aa	Known RBP	3.17	□□□□□ -1.9
SEC7	YDR170C	CDC60	P26637	1090 aa	Known RBP	3.17	□□□□□ -1.9
SEC7	YDR170C	SLA1	P32790	1244 aa		3.17	□□□□□ -1.9
SEC7	YDR170C	RVS167	P39743	482 aa	Known RBP	3.17	□□□□□ -1.9
SEC7	YDR170C	NDC80	P40460	691 aa		3.17	□□□□□ -1.9
SEC7	YDR170C	PSR2	Q07949	397 aa		3.17	□□□□□ -1.9
SEC7	YDR170C	RPL19A	P0CX82	189 aa	Known RBP	3.16	□□□□□ -1.9
SEC7	YDR170C	RPL19B	P0CX83	189 aa	Predicted RBP	3.16	□□□□□ -1.9
SEC7	YDR170C	CSC1	Q06538	782 aa		3.16	□□□□□ -1.9
SEC7	YDR170C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	RIP-Chip
SEC7	YDR170C	PRP3	Q03338	469 aa	Predicted RBP	3.16	□□□□□ -1.9
SEC7	YDR170C	HIM1	Q06674	414 aa		3.16	□□□□□ -1.9
SEC7	YDR170C	RPP0	P05317	312 aa	Known RBP	3.16	□□□□□ -1.9
SEC7	YDR170C	MIF2	P35201	549 aa		3.16	□□□□□ -1.9
SEC7	YDR170C	BTN2	P53286	410 aa		3.16	□□□□□ -1.9
SEC7	YDR170C	SAP190	P36123	1033 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms