RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeastyeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC13YDL220C ESP1Q03018 1630 aa8.31□□□□□ -1.08
CDC13YDL220C PAN1P32521 1480 aa8.31□□□□□ -1.08
CDC13YDL220C RNT1Q02555 471 aa8.31□□□□□ -1.08
CDC13YDL220C SWH1P35845 1188 aa8.3□□□□□ -1.08
CDC13YDL220C SEC9P40357 651 aa8.3□□□□□ -1.08
CDC13YDL220C YGL140CP53120 1219 aa8.3□□□□□ -1.08
CDC13YDL220C HOS3Q02959 697 aaKnown RBP8.3□□□□□ -1.08
CDC13YDL220C YMR102CQ03177 834 aa8.3□□□□□ -1.08
CDC13YDL220C SPT5P27692 1063 aaKnown RBP8.29□□□□□ -1.08
CDC13YDL220C VPS72Q03388 795 aa8.29□□□□□ -1.08
CDC13YDL220C APL5Q08951 932 aaKnown RBP8.29□□□□□ -1.08
CDC13YDL220C YLL054CQ12244 843 aa8.29□□□□□ -1.08
CDC13YDL220C MCM2P29469 868 aa8.29□□□□□ -1.08
CDC13YDL220C RPC82P32349 654 aa8.29□□□□□ -1.08
CDC13YDL220C VPS27P40343 622 aaKnown RBP8.29□□□□□ -1.08
CDC13YDL220C SUB1P54000 292 aaKnown RBP8.29□□□□□ -1.08
CDC13YDL220C ERV41Q04651 352 aa8.29□□□□□ -1.08
CDC13YDL220C ESC2Q06340 456 aa8.29□□□□□ -1.08
CDC13YDL220C RRP15Q06511 250 aaPredicted RBP8.29□□□□□ -1.08
CDC13YDL220C TCD1P38756 429 aa8.28□□□□□ -1.08
CDC13YDL220C SWI3P32591 825 aa8.28□□□□□ -1.08
CDC13YDL220C YMR1P47147 688 aaKnown RBP RIP-Chip data8.28□□□□□ -1.08not detected
CDC13YDL220C CHZ1P40019 153 aaPredicted RBP8.27□□□□□ -1.08
CDC13YDL220C LCD1Q04377 747 aa8.27□□□□□ -1.09
CDC13YDL220C SLP1Q12232 587 aa8.27□□□□□ -1.09
CDC13YDL220C GDT1P38301 280 aaPredicted RBP8.27□□□□□ -1.09
CDC13YDL220C TRM3Q07527 1436 aa8.26□□□□□ -1.09
CDC13YDL220C ALD3P54114 506 aa8.26□□□□□ -1.09
CDC13YDL220C PDS5Q04264 1277 aa8.26□□□□□ -1.09
CDC13YDL220C PHO87P25360 923 aa8.26□□□□□ -1.09
CDC13YDL220C APL6P46682 809 aa8.25□□□□□ -1.09
CDC13YDL220C PUS1Q12211 544 aaKnown RBP8.25□□□□□ -1.09
CDC13YDL220C PEA2P40091 420 aa8.25□□□□□ -1.09
CDC13YDL220C MDM38Q08179 573 aa8.25□□□□□ -1.09
CDC13YDL220C SFI1Q12369 946 aa8.24□□□□□ -1.09
CDC13YDL220C ARP5P53946 755 aa8.24□□□□□ -1.09
CDC13YDL220C YOL087CQ99247 1116 aa8.24□□□□□ -1.09
CDC13YDL220C SIT1P39980 628 aa8.23□□□□□ -1.09
CDC13YDL220C NFI1Q12216 726 aa8.23□□□□□ -1.09
CDC13YDL220C SPT16P32558 1035 aaKnown RBP8.23□□□□□ -1.09
CDC13YDL220C MHP1P43638 1398 aa8.23□□□□□ -1.09
CDC13YDL220C AIM20P40451 204 aa8.22□□□□□ -1.09
CDC13YDL220C YVC1Q12324 675 aa8.22□□□□□ -1.09
CDC13YDL220C SML1Q04964 104 aa8.22□□□□□ -1.09
CDC13YDL220C TSC11P40061 1430 aa8.22□□□□□ -1.09
CDC13YDL220C ZUO1P32527 433 aaKnown RBP8.22□□□□□ -1.09
CDC13YDL220C VPS30Q02948 557 aa8.22□□□□□ -1.09
CDC13YDL220C YNL035CP53962 389 aaKnown RBP8.21□□□□□ -1.1
CDC13YDL220C YCF1P39109 1515 aaKnown RBP8.21□□□□□ -1.1
CDC13YDL220C CDC45Q08032 650 aa8.21□□□□□ -1.1
CDC13YDL220C SNQ2P32568 1501 aaKnown RBP8.21□□□□□ -1.1
CDC13YDL220C RAD3P06839 778 aa8.2□□□□□ -1.1
CDC13YDL220C IRC20Q06554 1556 aa8.2□□□□□ -1.1
CDC13YDL220C LSP1Q12230 341 aaKnown RBP8.2□□□□□ -1.1
CDC13YDL220C PET111P08468 800 aa8.2□□□□□ -1.1
CDC13YDL220C VID30P53076 958 aa8.2□□□□□ -1.1
CDC13YDL220C ORM2Q06144 216 aa8.2□□□□□ -1.1
CDC13YDL220C MAK11P20484 414 aaKnown RBP8.19□□□□□ -1.1
CDC13YDL220C PEX19Q07418 342 aa8.19□□□□□ -1.1
CDC13YDL220C RTT107P38850 1070 aa8.19□□□□□ -1.1
CDC13YDL220C GIN4Q12263 1142 aa8.19□□□□□ -1.1
CDC13YDL220C SEC39Q12745 709 aa8.19□□□□□ -1.1
CDC13YDL220C RKM3P38222 552 aa8.18□□□□□ -1.1
CDC13YDL220C DNM1P54861 757 aa8.18□□□□□ -1.1
CDC13YDL220C NDL1Q06568 189 aa8.18□□□□□ -1.1
CDC13YDL220C PXR1P53335 271 aaPredicted RBP8.18□□□□□ -1.1
CDC13YDL220C MRS2Q01926 470 aa8.18□□□□□ -1.1
CDC13YDL220C DPH5P32469 300 aaPredicted RBP8.17□□□□□ -1.1
CDC13YDL220C HOT1Q03213 719 aa8.17□□□□□ -1.1
CDC13YDL220C NOP56Q12460 504 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1not detected
CDC13YDL220C YOR1P53049 1477 aa8.17□□□□□ -1.1
CDC13YDL220C GEA1P47102 1408 aaPredicted RBP8.17□□□□□ -1.1
CDC13YDL220C RKR1Q04781 1562 aa8.17□□□□□ -1.1
CDC13YDL220C RAD9P14737 1309 aa8.17□□□□□ -1.1
CDC13YDL220C PSO2P30620 661 aa8.16□□□□□ -1.1
CDC13YDL220C MFT1P33441 392 aaKnown RBP8.16□□□□□ -1.1
CDC13YDL220C NUF2P33895 451 aa8.16□□□□□ -1.1
CDC13YDL220C OLA1P38219 394 aaKnown RBP8.16□□□□□ -1.1
CDC13YDL220C LAM1P38851 1228 aa8.16□□□□□ -1.1
CDC13YDL220C VPS41P38959 992 aa8.16□□□□□ -1.1
CDC13YDL220C KAR3P17119 729 aa8.16□□□□□ -1.1
CDC13YDL220C MIC60P36112 540 aa8.15□□□□□ -1.1
CDC13YDL220C YMR124WP39523 943 aaKnown RBP8.15□□□□□ -1.11
CDC13YDL220C YGL081WP53156 320 aa8.14□□□□□ -1.11
CDC13YDL220C YOR389WQ08912 624 aa8.14□□□□□ -1.11
CDC13YDL220C TPS3P38426 1054 aaKnown RBP8.14□□□□□ -1.11
CDC13YDL220C MPP10P47083 593 aaKnown RBP8.14□□□□□ -1.11
CDC13YDL220C YNL050CP53952 270 aa8.14□□□□□ -1.11
CDC13YDL220C TLG2Q08144 397 aa8.14□□□□□ -1.11
CDC13YDL220C CDC11P32458 415 aa8.13□□□□□ -1.11
CDC13YDL220C GGA1Q06336 557 aa8.13□□□□□ -1.11
CDC13YDL220C NUP145P49687 1317 aa8.13□□□□□ -1.11
CDC13YDL220C PDR15Q04182 1529 aaKnown RBP8.12□□□□□ -1.11
CDC13YDL220C VPS5Q92331 675 aa8.12□□□□□ -1.11
CDC13YDL220C GCD6P32501 712 aaKnown RBP8.12□□□□□ -1.11
CDC13YDL220C PIM1P36775 1133 aa8.12□□□□□ -1.11
CDC13YDL220C NDC80P40460 691 aa8.12□□□□□ -1.11
CDC13YDL220C TFG1P41895 735 aaPredicted RBP8.12□□□□□ -1.11
CDC13YDL220C PSR1Q07800 427 aa8.12□□□□□ -1.11
CDC13YDL220C CYC8P14922 966 aa8.11□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms