RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeastyeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB2YDL084W NNF2P53253 936 aa6.99□□□□□ -1.29
SUB2YDL084W JIP4Q03361 876 aa6.99□□□□□ -1.29
SUB2YDL084W SAP30P38429 201 aa6.98□□□□□ -1.29
SUB2YDL084W DAN4P47179 1161 aa6.98□□□□□ -1.29
SUB2YDL084W SLX8P40072 274 aa6.97□□□□□ -1.29
SUB2YDL084W MEH1Q02205 184 aa6.97□□□□□ -1.29
SUB2YDL084W CFT2Q12102 859 aaPredicted RBP6.97□□□□□ -1.29
SUB2YDL084W RCF1Q03713 159 aa6.96□□□□□ -1.3
SUB2YDL084W GIR2Q03768 265 aaPredicted RBP6.96□□□□□ -1.3
SUB2YDL084W YDR341CQ05506 607 aaKnown RBP6.96□□□□□ -1.3
SUB2YDL084W APL5Q08951 932 aaKnown RBP6.96□□□□□ -1.3
SUB2YDL084W GAL11P19659 1081 aa6.95□□□□□ -1.3
SUB2YDL084W MET10P39692 1035 aa6.95□□□□□ -1.3
SUB2YDL084W CKB1P43639 278 aa6.95□□□□□ -1.3
SUB2YDL084W YGL081WP53156 320 aa6.95□□□□□ -1.3
SUB2YDL084W YDL129WQ07555 291 aa6.95□□□□□ -1.3
SUB2YDL084W ETT1Q08421 412 aaKnown RBP6.95□□□□□ -1.3
SUB2YDL084W GYP5Q12344 894 aa6.95□□□□□ -1.3
SUB2YDL084W BCK2P33306 851 aa6.94□□□□□ -1.3
SUB2YDL084W RCR1P38212 213 aa6.94□□□□□ -1.3
SUB2YDL084W SYH1Q02875 849 aaKnown RBP6.94□□□□□ -1.3
SUB2YDL084W PSK2Q08217 1101 aa6.94□□□□□ -1.3
SUB2YDL084W HTA1P04911 132 aaKnown RBP6.93□□□□□ -1.3
SUB2YDL084W HTA2P04912 132 aa6.93□□□□□ -1.3
SUB2YDL084W CHL1P22516 861 aaPredicted RBP6.93□□□□□ -1.3
SUB2YDL084W CBF5P33322 483 aaKnown RBP RIP-Chip data6.93□□□□□ -1.3not detected
SUB2YDL084W DJP1P40564 432 aa6.93□□□□□ -1.3
SUB2YDL084W MCM1P11746 286 aa6.92□□□□□ -1.3
SUB2YDL084W MFT1P33441 392 aaKnown RBP6.92□□□□□ -1.3
SUB2YDL084W SEC27P41811 889 aaKnown RBP6.92□□□□□ -1.3
SUB2YDL084W PKH1Q03407 766 aa6.92□□□□□ -1.3
SUB2YDL084W NPR3P38742 1146 aa6.91□□□□□ -1.3
SUB2YDL084W SEC9P40357 651 aa6.91□□□□□ -1.3
SUB2YDL084W MSH4P40965 878 aaPredicted RBP6.91□□□□□ -1.3
SUB2YDL084W MTR4P47047 1073 aaKnown RBP6.91□□□□□ -1.3
SUB2YDL084W TAN1P53072 289 aaPredicted RBP6.91□□□□□ -1.3
SUB2YDL084W SSA4P22202 642 aaKnown RBP6.9□□□□□ -1.3
SUB2YDL084W DCW1P36091 449 aa6.9□□□□□ -1.3
SUB2YDL084W PRE3P38624 215 aa6.9□□□□□ -1.3
SUB2YDL084W YLL054CQ12244 843 aa6.89□□□□□ -1.31
SUB2YDL084W RAD51P25454 400 aa6.88□□□□□ -1.31
SUB2YDL084W BLI1P35727 113 aa6.88□□□□□ -1.31
SUB2YDL084W MPE1P35728 441 aaKnown RBP6.88□□□□□ -1.31
SUB2YDL084W PTC4P38089 393 aa6.88□□□□□ -1.31
SUB2YDL084W YLR257WQ06146 321 aaKnown RBP6.88□□□□□ -1.31
SUB2YDL084W PUS1Q12211 544 aaKnown RBP6.88□□□□□ -1.31
SUB2YDL084W NOC2P39744 710 aaKnown RBP6.87□□□□□ -1.31
SUB2YDL084W YEL023CP39992 682 aa6.87□□□□□ -1.31
SUB2YDL084W IES1P43579 692 aa6.87□□□□□ -1.31
SUB2YDL084W UBX5Q06682 500 aa6.87□□□□□ -1.31
SUB2YDL084W IMH1Q06704 911 aaKnown RBP6.87□□□□□ -1.31
SUB2YDL084W NOP56Q12460 504 aaKnown RBP RIP-Chip data6.87□□□□□ -1.31not detected
SUB2YDL084W SEC3P33332 1336 aaKnown RBP6.86□□□□□ -1.31
SUB2YDL084W LTV1P34078 463 aa6.86□□□□□ -1.31
SUB2YDL084W RRP14P36080 434 aaKnown RBP6.86□□□□□ -1.31
SUB2YDL084W YMR124WP39523 943 aaKnown RBP6.86□□□□□ -1.31
SUB2YDL084W ERP2P39704 215 aa6.86□□□□□ -1.31
SUB2YDL084W VPS27P40343 622 aaKnown RBP6.86□□□□□ -1.31
SUB2YDL084W TAF1P46677 1066 aa6.86□□□□□ -1.31
SUB2YDL084W GDE1Q02979 1223 aa6.86□□□□□ -1.31
SUB2YDL084W CLF1Q12309 687 aaPredicted RBP6.86□□□□□ -1.31
SUB2YDL084W TOM20P35180 183 aa6.85□□□□□ -1.31
SUB2YDL084W SAP190P36123 1033 aa6.85□□□□□ -1.31
SUB2YDL084W NOP58Q12499 511 aaKnown RBP6.85□□□□□ -1.31
SUB2YDL084W RPA135P22138 1203 aaKnown RBP6.84□□□□□ -1.31
SUB2YDL084W POL5P39985 1022 aaKnown RBP6.84□□□□□ -1.31
SUB2YDL084W LEM3P42838 414 aa6.84□□□□□ -1.31
SUB2YDL084W VID30P53076 958 aa6.84□□□□□ -1.31
SUB2YDL084W YAF9P53930 226 aa6.84□□□□□ -1.31
SUB2YDL084W CEF1Q03654 590 aaPredicted RBP6.84□□□□□ -1.31
SUB2YDL084W TMA64Q04600 565 aaKnown RBP6.84□□□□□ -1.31
SUB2YDL084W CLC1P17891 233 aa6.83□□□□□ -1.32
SUB2YDL084W OPI1P21957 404 aa6.83□□□□□ -1.32
SUB2YDL084W NMD3P38861 518 aaKnown RBP6.83□□□□□ -1.32
SUB2YDL084W AIM20P40451 204 aa6.83□□□□□ -1.32
SUB2YDL084W HSP42Q12329 375 aa6.83□□□□□ -1.32
SUB2YDL084W TY1B-AO13527 1196 aaKnown RBP6.82□□□□□ -1.32
SUB2YDL084W PIM1P36775 1133 aa6.82□□□□□ -1.32
SUB2YDL084W PAM1P37304 830 aaKnown RBP6.82□□□□□ -1.32
SUB2YDL084W HGH1P48362 394 aaKnown RBP6.82□□□□□ -1.32
SUB2YDL084W HEL2Q05580 639 aaKnown RBP6.82□□□□□ -1.32
SUB2YDL084W RPN7Q06103 429 aaKnown RBP6.82□□□□□ -1.32
SUB2YDL084W TY4B-PA0A0B7P3V8 1104 aa6.81□□□□□ -1.32
SUB2YDL084W BYE1P36106 594 aa6.81□□□□□ -1.32
SUB2YDL084W BOI2P39969 1040 aa6.81□□□□□ -1.32
SUB2YDL084W MRX12P47084 519 aa6.81□□□□□ -1.32
SUB2YDL084W HOS2P53096 452 aaPredicted RBP6.81□□□□□ -1.32
SUB2YDL084W YDL121CQ07541 149 aa6.81□□□□□ -1.32
SUB2YDL084W TY4A-HQ6Q5P6 413 aa6.81□□□□□ -1.32
SUB2YDL084W VMA4P22203 233 aaKnown RBP6.8□□□□□ -1.32
SUB2YDL084W SLD2P34252 453 aa6.8□□□□□ -1.32
SUB2YDL084W PMC1P38929 1173 aaPredicted RBP6.8□□□□□ -1.32
SUB2YDL084W ESF2P53743 316 aaKnown RBP6.8□□□□□ -1.32
SUB2YDL084W GGA1Q06336 557 aa6.8□□□□□ -1.32
SUB2YDL084W YPR172WQ06608 200 aa6.8□□□□□ -1.32
SUB2YDL084W MSM1P22438 575 aa6.79□□□□□ -1.32
SUB2YDL084W RSC8P43609 557 aaKnown RBP6.79□□□□□ -1.32
SUB2YDL084W BNI5P53890 448 aaKnown RBP6.79□□□□□ -1.32
SUB2YDL084W RRP15Q06511 250 aaPredicted RBP6.79□□□□□ -1.32
SUB2YDL084W YVC1Q12324 675 aa6.79□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 40 ms