RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeastyeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB2YDL084W NNF2P53253 936 aa6.99□□□□□ -1.29
SUB2YDL084W JIP4Q03361 876 aa6.99□□□□□ -1.29
SUB2YDL084W SAP30P38429 201 aa6.98□□□□□ -1.29
SUB2YDL084W DAN4P47179 1161 aa6.98□□□□□ -1.29
SUB2YDL084W SLX8P40072 274 aa6.97□□□□□ -1.29
SUB2YDL084W MEH1Q02205 184 aa6.97□□□□□ -1.29
SUB2YDL084W CFT2Q12102 859 aaPredicted RBP6.97□□□□□ -1.29
SUB2YDL084W RCF1Q03713 159 aa6.96□□□□□ -1.3
SUB2YDL084W GIR2Q03768 265 aaPredicted RBP6.96□□□□□ -1.3
SUB2YDL084W YDR341CQ05506 607 aaKnown RBP6.96□□□□□ -1.3
SUB2YDL084W APL5Q08951 932 aaKnown RBP6.96□□□□□ -1.3
SUB2YDL084W GAL11P19659 1081 aa6.95□□□□□ -1.3
SUB2YDL084W MET10P39692 1035 aa6.95□□□□□ -1.3
SUB2YDL084W CKB1P43639 278 aa6.95□□□□□ -1.3
SUB2YDL084W YGL081WP53156 320 aa6.95□□□□□ -1.3
SUB2YDL084W YDL129WQ07555 291 aa6.95□□□□□ -1.3
SUB2YDL084W ETT1Q08421 412 aaKnown RBP6.95□□□□□ -1.3
SUB2YDL084W GYP5Q12344 894 aa6.95□□□□□ -1.3
SUB2YDL084W BCK2P33306 851 aa6.94□□□□□ -1.3
SUB2YDL084W RCR1P38212 213 aa6.94□□□□□ -1.3
SUB2YDL084W SYH1Q02875 849 aaKnown RBP6.94□□□□□ -1.3
SUB2YDL084W PSK2Q08217 1101 aa6.94□□□□□ -1.3
SUB2YDL084W HTA1P04911 132 aaKnown RBP6.93□□□□□ -1.3
SUB2YDL084W HTA2P04912 132 aa6.93□□□□□ -1.3
SUB2YDL084W CHL1P22516 861 aaPredicted RBP6.93□□□□□ -1.3
SUB2YDL084W CBF5P33322 483 aaKnown RBP RIP-Chip data6.93□□□□□ -1.3not detected
SUB2YDL084W DJP1P40564 432 aa6.93□□□□□ -1.3
SUB2YDL084W MCM1P11746 286 aa6.92□□□□□ -1.3
SUB2YDL084W MFT1P33441 392 aaKnown RBP6.92□□□□□ -1.3
SUB2YDL084W SEC27P41811 889 aaKnown RBP6.92□□□□□ -1.3
SUB2YDL084W PKH1Q03407 766 aa6.92□□□□□ -1.3
SUB2YDL084W NPR3P38742 1146 aa6.91□□□□□ -1.3
SUB2YDL084W SEC9P40357 651 aa6.91□□□□□ -1.3
SUB2YDL084W MSH4P40965 878 aaPredicted RBP6.91□□□□□ -1.3
SUB2YDL084W MTR4P47047 1073 aaKnown RBP6.91□□□□□ -1.3
SUB2YDL084W TAN1P53072 289 aaPredicted RBP6.91□□□□□ -1.3
SUB2YDL084W SSA4P22202 642 aaKnown RBP6.9□□□□□ -1.3
SUB2YDL084W DCW1P36091 449 aa6.9□□□□□ -1.3
SUB2YDL084W PRE3P38624 215 aa6.9□□□□□ -1.3
SUB2YDL084W YLL054CQ12244 843 aa6.89□□□□□ -1.31
SUB2YDL084W RAD51P25454 400 aa6.88□□□□□ -1.31
SUB2YDL084W BLI1P35727 113 aa6.88□□□□□ -1.31
SUB2YDL084W MPE1P35728 441 aaKnown RBP6.88□□□□□ -1.31
SUB2YDL084W PTC4P38089 393 aa6.88□□□□□ -1.31
SUB2YDL084W YLR257WQ06146 321 aaKnown RBP6.88□□□□□ -1.31
SUB2YDL084W PUS1Q12211 544 aaKnown RBP6.88□□□□□ -1.31
SUB2YDL084W NOC2P39744 710 aaKnown RBP6.87□□□□□ -1.31
SUB2YDL084W YEL023CP39992 682 aa6.87□□□□□ -1.31
SUB2YDL084W IES1P43579 692 aa6.87□□□□□ -1.31
SUB2YDL084W UBX5Q06682 500 aa6.87□□□□□ -1.31
SUB2YDL084W IMH1Q06704 911 aaKnown RBP6.87□□□□□ -1.31
SUB2YDL084W NOP56Q12460 504 aaKnown RBP RIP-Chip data6.87□□□□□ -1.31not detected
SUB2YDL084W SEC3P33332 1336 aaKnown RBP6.86□□□□□ -1.31
SUB2YDL084W LTV1P34078 463 aa6.86□□□□□ -1.31
SUB2YDL084W RRP14P36080 434 aaKnown RBP6.86□□□□□ -1.31
SUB2YDL084W YMR124WP39523 943 aaKnown RBP6.86□□□□□ -1.31
SUB2YDL084W ERP2P39704 215 aa6.86□□□□□ -1.31
SUB2YDL084W VPS27P40343 622 aaKnown RBP6.86□□□□□ -1.31
SUB2YDL084W TAF1P46677 1066 aa6.86□□□□□ -1.31
SUB2YDL084W GDE1Q02979 1223 aa6.86□□□□□ -1.31
SUB2YDL084W CLF1Q12309 687 aaPredicted RBP6.86□□□□□ -1.31
SUB2YDL084W TOM20P35180 183 aa6.85□□□□□ -1.31
SUB2YDL084W SAP190P36123 1033 aa6.85□□□□□ -1.31
SUB2YDL084W NOP58Q12499 511 aaKnown RBP6.85□□□□□ -1.31
SUB2YDL084W RPA135P22138 1203 aaKnown RBP6.84□□□□□ -1.31
SUB2YDL084W POL5P39985 1022 aaKnown RBP6.84□□□□□ -1.31
SUB2YDL084W LEM3P42838 414 aa6.84□□□□□ -1.31
SUB2YDL084W VID30P53076 958 aa6.84□□□□□ -1.31
SUB2YDL084W YAF9P53930 226 aa6.84□□□□□ -1.31
SUB2YDL084W CEF1Q03654 590 aaPredicted RBP6.84□□□□□ -1.31
SUB2YDL084W TMA64Q04600 565 aaKnown RBP6.84□□□□□ -1.31
SUB2YDL084W CLC1P17891 233 aa6.83□□□□□ -1.32
SUB2YDL084W OPI1P21957 404 aa6.83□□□□□ -1.32
SUB2YDL084W NMD3P38861 518 aaKnown RBP6.83□□□□□ -1.32
SUB2YDL084W AIM20P40451 204 aa6.83□□□□□ -1.32
SUB2YDL084W HSP42Q12329 375 aa6.83□□□□□ -1.32
SUB2YDL084W TY1B-AO13527 1196 aaKnown RBP6.82□□□□□ -1.32
SUB2YDL084W PIM1P36775 1133 aa6.82□□□□□ -1.32
SUB2YDL084W PAM1P37304 830 aaKnown RBP6.82□□□□□ -1.32
SUB2YDL084W HGH1P48362 394 aaKnown RBP6.82□□□□□ -1.32
SUB2YDL084W HEL2Q05580 639 aaKnown RBP6.82□□□□□ -1.32
SUB2YDL084W RPN7Q06103 429 aaKnown RBP6.82□□□□□ -1.32
SUB2YDL084W TY4B-PA0A0B7P3V8 1104 aa6.81□□□□□ -1.32
SUB2YDL084W BYE1P36106 594 aa6.81□□□□□ -1.32
SUB2YDL084W BOI2P39969 1040 aa6.81□□□□□ -1.32
SUB2YDL084W MRX12P47084 519 aa6.81□□□□□ -1.32
SUB2YDL084W HOS2P53096 452 aaPredicted RBP6.81□□□□□ -1.32
SUB2YDL084W YDL121CQ07541 149 aa6.81□□□□□ -1.32
SUB2YDL084W TY4A-HQ6Q5P6 413 aa6.81□□□□□ -1.32
SUB2YDL084W VMA4P22203 233 aaKnown RBP6.8□□□□□ -1.32
SUB2YDL084W SLD2P34252 453 aa6.8□□□□□ -1.32
SUB2YDL084W PMC1P38929 1173 aaPredicted RBP6.8□□□□□ -1.32
SUB2YDL084W ESF2P53743 316 aaKnown RBP6.8□□□□□ -1.32
SUB2YDL084W GGA1Q06336 557 aa6.8□□□□□ -1.32
SUB2YDL084W YPR172WQ06608 200 aa6.8□□□□□ -1.32
SUB2YDL084W MSM1P22438 575 aa6.79□□□□□ -1.32
SUB2YDL084W RSC8P43609 557 aaKnown RBP6.79□□□□□ -1.32
SUB2YDL084W BNI5P53890 448 aaKnown RBP6.79□□□□□ -1.32
SUB2YDL084W RRP15Q06511 250 aaPredicted RBP6.79□□□□□ -1.32
SUB2YDL084W YVC1Q12324 675 aa6.79□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 774.4 ms