RNA–Protein interactions for RNA: YCL010C

SGF29, Transcript of Component of the HAT/Core module of the SAGA, SLIK, and ADA complexes, yeastyeast

Gene SGF29, Length 780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF29YCL010C TFA1P36100 482 aa8.7□□□□□ -1.02
SGF29YCL010C PTP3P40048 928 aa8.7□□□□□ -1.02
SGF29YCL010C CPS1P27614 576 aa8.69□□□□□ -1.02
SGF29YCL010C REB1P21538 810 aa8.68□□□□□ -1.02
SGF29YCL010C RRP5Q05022 1729 aaKnown RBP8.68□□□□□ -1.02
SGF29YCL010C AVT3P36062 692 aa8.65□□□□□ -1.02
SGF29YCL010C CHZ1P40019 153 aaPredicted RBP8.63□□□□□ -1.03
SGF29YCL010C ENT1Q12518 454 aa8.63□□□□□ -1.03
SGF29YCL010C YRF1-2P40105 1681 aa8.62□□□□□ -1.03
SGF29YCL010C PRP45P28004 379 aaPredicted RBP8.62□□□□□ -1.03
SGF29YCL010C YAH1Q12184 172 aaKnown RBP8.62□□□□□ -1.03
SGF29YCL010C PSK1P31374 1356 aa8.61□□□□□ -1.03
SGF29YCL010C ENV9Q08651 330 aa8.6□□□□□ -1.03
SGF29YCL010C DIP2Q12220 943 aaPredicted RBP8.6□□□□□ -1.03
SGF29YCL010C YML133CQ03099 1374 aa8.59□□□□□ -1.03
SGF29YCL010C YLL067CQ07888 1374 aa8.59□□□□□ -1.03
SGF29YCL010C YLL066CQ99208 1374 aa8.59□□□□□ -1.03
SGF29YCL010C CSE4P36012 229 aa8.58□□□□□ -1.04
SGF29YCL010C YIL177CP40434 1758 aa8.58□□□□□ -1.04
SGF29YCL010C YJL225CP40889 1758 aa8.58□□□□□ -1.04
SGF29YCL010C RPS24AP0CX31 135 aaKnown RBP8.57□□□□□ -1.04
SGF29YCL010C RPS24BP0CX32 135 aaKnown RBP8.57□□□□□ -1.04
SGF29YCL010C POL5P39985 1022 aaKnown RBP8.57□□□□□ -1.04
SGF29YCL010C ADE6P38972 1358 aaKnown RBP8.57□□□□□ -1.04
SGF29YCL010C YIL055CP40523 627 aaKnown RBP8.56□□□□□ -1.04
SGF29YCL010C MSB3P48566 633 aaPredicted RBP8.56□□□□□ -1.04
SGF29YCL010C MLP1Q02455 1875 aaKnown RBP8.55□□□□□ -1.04
SGF29YCL010C PRP5P21372 849 aaPredicted RBP8.55□□□□□ -1.04
SGF29YCL010C RTG3P38165 486 aa8.54□□□□□ -1.04
SGF29YCL010C IMH1Q06704 911 aaKnown RBP8.54□□□□□ -1.04
SGF29YCL010C LEU2P04173 364 aaPredicted RBP8.53□□□□□ -1.04
SGF29YCL010C GLN1P32288 370 aaKnown RBP8.53□□□□□ -1.04
SGF29YCL010C URB1P34241 1764 aaKnown RBP8.5□□□□□ -1.05
SGF29YCL010C FKS3Q04952 1785 aa8.5□□□□□ -1.05
SGF29YCL010C MHP1P43638 1398 aa8.5□□□□□ -1.05
SGF29YCL010C PRI1P10363 409 aa8.5□□□□□ -1.05
SGF29YCL010C MTR4P47047 1073 aaKnown RBP8.5□□□□□ -1.05
SGF29YCL010C NST1P53935 1240 aa8.49□□□□□ -1.05
SGF29YCL010C GAS4Q08271 471 aa8.49□□□□□ -1.05
SGF29YCL010C DPS1P04802 557 aaKnown RBP8.48□□□□□ -1.05
SGF29YCL010C FKH1P40466 484 aa8.48□□□□□ -1.05
SGF29YCL010C PDS5Q04264 1277 aa8.48□□□□□ -1.05
SGF29YCL010C LEU3P08638 886 aa8.47□□□□□ -1.05
SGF29YCL010C TCB1Q12466 1186 aa8.46□□□□□ -1.06
SGF29YCL010C SLM3Q12093 417 aa8.45□□□□□ -1.06
SGF29YCL010C APC1P53886 1748 aa8.45□□□□□ -1.06
SGF29YCL010C IES2P40154 320 aa8.44□□□□□ -1.06
SGF29YCL010C PRP43P53131 767 aaKnown RBP8.44□□□□□ -1.06
SGF29YCL010C HIM1Q06674 414 aa8.44□□□□□ -1.06
SGF29YCL010C AUS1Q08409 1394 aa8.44□□□□□ -1.06
SGF29YCL010C XKS1P42826 600 aa8.43□□□□□ -1.06
SGF29YCL010C PRY3P47033 881 aa8.43□□□□□ -1.06
SGF29YCL010C YMR074CQ04773 145 aa8.43□□□□□ -1.06
SGF29YCL010C RSF2P46974 1380 aa8.43□□□□□ -1.06
SGF29YCL010C PDI1P17967 522 aaKnown RBP8.42□□□□□ -1.06
SGF29YCL010C AAD16Q02895 342 aa8.42□□□□□ -1.06
SGF29YCL010C YRF1-3P0CX14 1859 aa8.42□□□□□ -1.06
SGF29YCL010C YRF1-7P0CX15 1859 aa8.42□□□□□ -1.06
SGF29YCL010C YRF1-6P53819 1859 aa8.42□□□□□ -1.06
SGF29YCL010C PSD2P53037 1138 aaKnown RBP8.41□□□□□ -1.06
SGF29YCL010C RTF1P53064 558 aa8.41□□□□□ -1.06
SGF29YCL010C BUD31P25337 157 aaPredicted RBP8.4□□□□□ -1.06
SGF29YCL010C ENP1P38333 483 aaKnown RBP8.4□□□□□ -1.06
SGF29YCL010C SCT1P32784 759 aa8.39□□□□□ -1.07
SGF29YCL010C DOT5P40553 215 aa8.39□□□□□ -1.07
SGF29YCL010C YRF1-4O13559 1382 aa8.38□□□□□ -1.07
SGF29YCL010C TRK1P12685 1235 aa8.38□□□□□ -1.07
SGF29YCL010C KAR2P16474 682 aaKnown RBP8.38□□□□□ -1.07
SGF29YCL010C YEF3P16521 1044 aaKnown RBP8.38□□□□□ -1.07
SGF29YCL010C RPN11P43588 306 aaKnown RBP8.38□□□□□ -1.07
SGF29YCL010C FOX2Q02207 900 aaKnown RBP8.38□□□□□ -1.07
SGF29YCL010C YKL133CP36066 463 aa8.37□□□□□ -1.07
SGF29YCL010C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.37□□□□□ -1.07not detected
SGF29YCL010C ISW2Q08773 1120 aa8.37□□□□□ -1.07
SGF29YCL010C FRK1Q03002 865 aaPredicted RBP8.36□□□□□ -1.07
SGF29YCL010C SPT7P35177 1332 aa8.35□□□□□ -1.07
SGF29YCL010C PAP2P53632 584 aaKnown RBP8.35□□□□□ -1.07
SGF29YCL010C ROM2P51862 1356 aaKnown RBP8.35□□□□□ -1.07
SGF29YCL010C SEC3P33332 1336 aaKnown RBP8.34□□□□□ -1.07
SGF29YCL010C COBP00163 385 aa8.34□□□□□ -1.07
SGF29YCL010C RCR1P38212 213 aa8.34□□□□□ -1.07
SGF29YCL010C RPG1P38249 964 aaKnown RBP8.32□□□□□ -1.08
SGF29YCL010C ADE16P54113 591 aaKnown RBP8.32□□□□□ -1.08
SGF29YCL010C TAP42Q04372 366 aa8.32□□□□□ -1.08
SGF29YCL010C SNF2P22082 1703 aa8.32□□□□□ -1.08
SGF29YCL010C GRX4P32642 244 aa8.31□□□□□ -1.08
SGF29YCL010C YJL181WP46987 611 aa8.3□□□□□ -1.08
SGF29YCL010C SIR4P11978 1358 aa8.3□□□□□ -1.08
SGF29YCL010C RIM15P43565 1770 aa8.3□□□□□ -1.08
SGF29YCL010C UBP1P25037 809 aa8.29□□□□□ -1.08
SGF29YCL010C NPR2P39923 615 aa8.29□□□□□ -1.08
SGF29YCL010C RPO41P13433 1351 aaKnown RBP8.29□□□□□ -1.08
SGF29YCL010C YKR075CP36155 307 aa8.28□□□□□ -1.08
SGF29YCL010C LYS4P49367 693 aaPredicted RBP8.28□□□□□ -1.08
SGF29YCL010C LAM6Q08001 693 aa8.28□□□□□ -1.08
SGF29YCL010C PRP40P33203 583 aaKnown RBP8.27□□□□□ -1.09
SGF29YCL010C HSP104P31539 908 aaKnown RBP8.25□□□□□ -1.09
SGF29YCL010C RRP46P53256 223 aaPredicted RBP8.25□□□□□ -1.09
SGF29YCL010C MEC3Q02574 474 aa8.25□□□□□ -1.09
SGF29YCL010C ATG13Q06628 738 aa8.25□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms