RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeastyeast

Gene LDB16, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB16YCL005W RAM2P29703 316 aa9.05□□□□□ -0.96
LDB16YCL005W MMS1Q06211 1407 aa9.05□□□□□ -0.96
LDB16YCL005W BUD21Q08492 214 aaPredicted RBP9.03□□□□□ -0.96
LDB16YCL005W PIB1Q06651 286 aa9.02□□□□□ -0.97
LDB16YCL005W DOP1Q03921 1698 aa9.01□□□□□ -0.97
LDB16YCL005W BNR1P40450 1375 aa9□□□□□ -0.97
LDB16YCL005W TRM3Q07527 1436 aa9□□□□□ -0.97
LDB16YCL005W RCR1P38212 213 aa9□□□□□ -0.97
LDB16YCL005W AIR2Q12476 344 aaKnown RBP9□□□□□ -0.97
LDB16YCL005W GCN2P15442 1659 aa9□□□□□ -0.97
LDB16YCL005W FKH1P40466 484 aa8.99□□□□□ -0.97
LDB16YCL005W YJL171CP46992 396 aa8.98□□□□□ -0.97
LDB16YCL005W BNI1P41832 1953 aa8.97□□□□□ -0.97
LDB16YCL005W MAK11P20484 414 aaKnown RBP8.96□□□□□ -0.98
LDB16YCL005W VPS29P38759 282 aa8.96□□□□□ -0.98
LDB16YCL005W ULI1P43604 169 aa8.96□□□□□ -0.98
LDB16YCL005W ITT1Q04638 464 aa8.96□□□□□ -0.98
LDB16YCL005W CHC1P22137 1653 aaKnown RBP8.96□□□□□ -0.98
LDB16YCL005W YMR1P47147 688 aaKnown RBP RIP-Chip data8.94□□□□□ -0.98not detected
LDB16YCL005W LDB19Q12502 818 aa8.94□□□□□ -0.98
LDB16YCL005W SET1P38827 1080 aaKnown RBP8.93□□□□□ -0.98
LDB16YCL005W IOC2Q12072 812 aa8.91□□□□□ -0.98
LDB16YCL005W MSB4Q12317 492 aa8.91□□□□□ -0.98
LDB16YCL005W YOR093CQ12275 1648 aa8.87□□□□□ -0.99
LDB16YCL005W EAP1P36041 632 aaKnown RBP8.87□□□□□ -0.99
LDB16YCL005W NOP7P53261 605 aaKnown RBP8.87□□□□□ -0.99
LDB16YCL005W PAF1P38351 445 aa8.86□□□□□ -0.99
LDB16YCL005W DBP1P24784 617 aaKnown RBP8.84□□□□□ -0.99
LDB16YCL005W PDR5P33302 1511 aaKnown RBP8.84□□□□□ -0.99
LDB16YCL005W YOL036WQ08206 761 aa8.83□□□□□ -1
LDB16YCL005W NOP53Q12080 455 aaKnown RBP8.83□□□□□ -1
LDB16YCL005W BMT6Q12291 365 aa8.83□□□□□ -1
LDB16YCL005W NUP188P52593 1655 aaKnown RBP8.83□□□□□ -1
LDB16YCL005W DNF2Q12675 1612 aa8.82□□□□□ -1
LDB16YCL005W COQ8P27697 501 aa8.81□□□□□ -1
LDB16YCL005W STS1P38637 319 aa8.81□□□□□ -1
LDB16YCL005W SET4P42948 560 aa8.81□□□□□ -1
LDB16YCL005W YPR148CQ06523 435 aa8.81□□□□□ -1
LDB16YCL005W URN1Q06525 465 aaKnown RBP8.81□□□□□ -1
LDB16YCL005W YFR006WP43590 535 aa8.8□□□□□ -1
LDB16YCL005W VMR1P38735 1592 aa8.8□□□□□ -1
LDB16YCL005W IML1P47170 1584 aa8.78□□□□□ -1
LDB16YCL005W TRP5P00931 707 aaKnown RBP8.77□□□□□ -1.01
LDB16YCL005W MIF2P35201 549 aa8.77□□□□□ -1.01
LDB16YCL005W LEU3P08638 886 aa8.76□□□□□ -1.01
LDB16YCL005W VMA1P17255 1071 aaKnown RBP8.76□□□□□ -1.01
LDB16YCL005W RTG1P32607 177 aa8.76□□□□□ -1.01
LDB16YCL005W POL5P39985 1022 aaKnown RBP8.76□□□□□ -1.01
LDB16YCL005W RAV1P47104 1357 aa8.75□□□□□ -1.01
LDB16YCL005W LEO1P38439 464 aa8.75□□□□□ -1.01
LDB16YCL005W VPS70P47161 811 aa8.75□□□□□ -1.01
LDB16YCL005W PDR11P40550 1411 aa8.73□□□□□ -1.01
LDB16YCL005W IPL1P38991 367 aa8.73□□□□□ -1.01
LDB16YCL005W SAM3Q08986 587 aa8.73□□□□□ -1.01
LDB16YCL005W RTC1Q08281 1341 aa8.73□□□□□ -1.01
LDB16YCL005W YAP3P38749 330 aa8.72□□□□□ -1.01
LDB16YCL005W NCR1Q12200 1170 aa8.72□□□□□ -1.01
LDB16YCL005W YNL035CP53962 389 aaKnown RBP8.71□□□□□ -1.02
LDB16YCL005W SEC61P32915 480 aa8.69□□□□□ -1.02
LDB16YCL005W TYS1P36421 394 aaKnown RBP8.69□□□□□ -1.02
LDB16YCL005W EDS1P38073 919 aa8.68□□□□□ -1.02
LDB16YCL005W SPB4P25808 606 aaPredicted RBP8.67□□□□□ -1.02
LDB16YCL005W ABP1P15891 592 aaKnown RBP8.66□□□□□ -1.02
LDB16YCL005W PTC3P34221 468 aaKnown RBP8.66□□□□□ -1.02
LDB16YCL005W ESL2P36168 1195 aa8.64□□□□□ -1.03
LDB16YCL005W DNF3Q12674 1656 aa8.64□□□□□ -1.03
LDB16YCL005W HAP1P0CE41 1502 aa8.64□□□□□ -1.03
LDB16YCL005W TAF5P38129 798 aa8.63□□□□□ -1.03
LDB16YCL005W NUP192P47054 1683 aa8.62□□□□□ -1.03
LDB16YCL005W TFG1P41895 735 aaPredicted RBP8.62□□□□□ -1.03
LDB16YCL005W TY3B-IQ7LHG5 1498 aaKnown RBP8.62□□□□□ -1.03
LDB16YCL005W ORC1P54784 914 aaPredicted RBP8.61□□□□□ -1.03
LDB16YCL005W GYP5Q12344 894 aa8.6□□□□□ -1.03
LDB16YCL005W JIP4Q03361 876 aa8.59□□□□□ -1.03
LDB16YCL005W SCT1P32784 759 aa8.58□□□□□ -1.04
LDB16YCL005W REF2P42073 533 aaPredicted RBP8.58□□□□□ -1.04
LDB16YCL005W ATH1P48016 1211 aa8.58□□□□□ -1.04
LDB16YCL005W GRE2Q12068 342 aaKnown RBP8.58□□□□□ -1.04
LDB16YCL005W PBS2P08018 668 aa8.57□□□□□ -1.04
LDB16YCL005W ALD4P46367 519 aaKnown RBP8.57□□□□□ -1.04
LDB16YCL005W SEC3P33332 1336 aaKnown RBP8.56□□□□□ -1.04
LDB16YCL005W GUT1P32190 709 aa8.56□□□□□ -1.04
LDB16YCL005W KIP3P53086 805 aaKnown RBP8.56□□□□□ -1.04
LDB16YCL005W MHP1P43638 1398 aa8.56□□□□□ -1.04
LDB16YCL005W HTA1P04911 132 aaKnown RBP8.55□□□□□ -1.04
LDB16YCL005W HTA2P04912 132 aa8.55□□□□□ -1.04
LDB16YCL005W DSF2P38213 736 aa8.55□□□□□ -1.04
LDB16YCL005W RPN1P38764 993 aaKnown RBP8.55□□□□□ -1.04
LDB16YCL005W DAN4P47179 1161 aa8.55□□□□□ -1.04
LDB16YCL005W MAK10Q02197 733 aa8.55□□□□□ -1.04
LDB16YCL005W BCK1Q01389 1478 aa8.55□□□□□ -1.04
LDB16YCL005W RAD9P14737 1309 aa8.54□□□□□ -1.04
LDB16YCL005W NAP1P25293 417 aaKnown RBP8.54□□□□□ -1.04
LDB16YCL005W YLR419WQ06698 1435 aaKnown RBP8.54□□□□□ -1.04
LDB16YCL005W DCW1P36091 449 aa8.53□□□□□ -1.04
LDB16YCL005W SPE2P21182 396 aa8.52□□□□□ -1.05
LDB16YCL005W MRX12P47084 519 aa8.52□□□□□ -1.05
LDB16YCL005W TAF8Q03750 510 aa8.52□□□□□ -1.05
LDB16YCL005W CAB1Q04430 367 aa8.52□□□□□ -1.05
LDB16YCL005W SAP30P38429 201 aa8.51□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms