RNA–Protein interactions for RNA: YBR200W

BEM1, Transcript of Protein containing SH3-domains, yeastyeast

Gene BEM1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BEM1YBR200W IPL1P38991 367 aa9.46□□□□□ -0.89
BEM1YBR200W FUN12P39730 1002 aaKnown RBP9.46□□□□□ -0.89
BEM1YBR200W ENV11P53246 860 aa9.45□□□□□ -0.9
BEM1YBR200W AIM44Q99299 758 aa9.45□□□□□ -0.9
BEM1YBR200W TYS1P36421 394 aaKnown RBP9.45□□□□□ -0.9
BEM1YBR200W NOP7P53261 605 aaKnown RBP9.44□□□□□ -0.9
BEM1YBR200W YMR196WQ04336 1088 aa9.44□□□□□ -0.9
BEM1YBR200W YGR130CP53278 816 aa9.43□□□□□ -0.9
BEM1YBR200W AAD16Q02895 342 aa9.43□□□□□ -0.9
BEM1YBR200W NUP188P52593 1655 aaKnown RBP9.43□□□□□ -0.9
BEM1YBR200W FPR3P38911 411 aaKnown RBP9.42□□□□□ -0.9
BEM1YBR200W PRI1P10363 409 aa9.42□□□□□ -0.9
BEM1YBR200W NAP1P25293 417 aaKnown RBP9.42□□□□□ -0.9
BEM1YBR200W RIX1P38883 763 aaPredicted RBP9.42□□□□□ -0.9
BEM1YBR200W GCN2P15442 1659 aa9.42□□□□□ -0.9
BEM1YBR200W TY1B-NL2Q99337 1749 aaKnown RBP9.41□□□□□ -0.9
BEM1YBR200W VMR1P38735 1592 aa9.39□□□□□ -0.91
BEM1YBR200W ORC1P54784 914 aaPredicted RBP9.39□□□□□ -0.91
BEM1YBR200W PDR5P33302 1511 aaKnown RBP9.38□□□□□ -0.91
BEM1YBR200W ROX1P25042 368 aa9.38□□□□□ -0.91
BEM1YBR200W YIR014WP40570 242 aa9.38□□□□□ -0.91
BEM1YBR200W GLN1P32288 370 aaKnown RBP9.36□□□□□ -0.91
BEM1YBR200W HAP1P0CE41 1502 aa9.36□□□□□ -0.91
BEM1YBR200W CDC45Q08032 650 aa9.36□□□□□ -0.91
BEM1YBR200W PDS5Q04264 1277 aa9.35□□□□□ -0.91
BEM1YBR200W PLP2Q12017 286 aa9.34□□□□□ -0.91
BEM1YBR200W HSP82P02829 709 aaKnown RBP9.33□□□□□ -0.92
BEM1YBR200W RPP0P05317 312 aaKnown RBP9.32□□□□□ -0.92
BEM1YBR200W BUD21Q08492 214 aaPredicted RBP9.32□□□□□ -0.92
BEM1YBR200W VPS27P40343 622 aaKnown RBP9.32□□□□□ -0.92
BEM1YBR200W PAF1P38351 445 aa9.31□□□□□ -0.92
BEM1YBR200W APP1P53933 587 aa9.31□□□□□ -0.92
BEM1YBR200W YAH1Q12184 172 aaKnown RBP9.31□□□□□ -0.92
BEM1YBR200W SLN1P39928 1220 aaPredicted RBP9.29□□□□□ -0.92
BEM1YBR200W IOC4Q04213 475 aa9.29□□□□□ -0.92
BEM1YBR200W FPR4Q06205 392 aaPredicted RBP9.29□□□□□ -0.92
BEM1YBR200W RVB2Q12464 471 aaKnown RBP9.29□□□□□ -0.92
BEM1YBR200W SPT2P06843 333 aaPredicted RBP9.29□□□□□ -0.92
BEM1YBR200W RNA1P11745 407 aaKnown RBP9.29□□□□□ -0.92
BEM1YBR200W NST1P53935 1240 aa9.28□□□□□ -0.92
BEM1YBR200W TY3B-IQ7LHG5 1498 aaKnown RBP9.27□□□□□ -0.93
BEM1YBR200W DJP1P40564 432 aa9.26□□□□□ -0.93
BEM1YBR200W PSH1Q12161 406 aa9.26□□□□□ -0.93
BEM1YBR200W PCT1P13259 424 aa9.26□□□□□ -0.93
BEM1YBR200W YIL055CP40523 627 aaKnown RBP9.26□□□□□ -0.93
BEM1YBR200W SPT21P35209 758 aa9.25□□□□□ -0.93
BEM1YBR200W EDE1P34216 1381 aa9.24□□□□□ -0.93
BEM1YBR200W SPC110P32380 944 aa9.23□□□□□ -0.93
BEM1YBR200W VPS24P36095 224 aaKnown RBP9.23□□□□□ -0.93
BEM1YBR200W YCK3P39962 524 aa9.23□□□□□ -0.93
BEM1YBR200W NOP58Q12499 511 aaKnown RBP9.22□□□□□ -0.93
BEM1YBR200W NMD2P38798 1089 aaKnown RBP9.21□□□□□ -0.93
BEM1YBR200W CTR9P89105 1077 aa9.21□□□□□ -0.93
BEM1YBR200W NOT3P06102 836 aaKnown RBP9.2□□□□□ -0.94
BEM1YBR200W PTP3P40048 928 aa9.2□□□□□ -0.94
BEM1YBR200W MSP1P28737 362 aa9.19□□□□□ -0.94
BEM1YBR200W KRE5P22023 1365 aa9.18□□□□□ -0.94
BEM1YBR200W ARL1P38116 183 aaKnown RBP9.16□□□□□ -0.94
BEM1YBR200W YPP1P46951 817 aa9.16□□□□□ -0.94
BEM1YBR200W KIP3P53086 805 aaKnown RBP9.16□□□□□ -0.94
BEM1YBR200W YDL144CQ07589 356 aa9.16□□□□□ -0.94
BEM1YBR200W PIL1P53252 339 aaKnown RBP9.15□□□□□ -0.94
BEM1YBR200W RIA1P53893 1110 aa9.15□□□□□ -0.94
BEM1YBR200W PDR11P40550 1411 aa9.15□□□□□ -0.95
BEM1YBR200W SUI2P20459 304 aaKnown RBP9.12□□□□□ -0.95
BEM1YBR200W REB1P21538 810 aa9.12□□□□□ -0.95
BEM1YBR200W RPN1P38764 993 aaKnown RBP9.12□□□□□ -0.95
BEM1YBR200W VPS4P52917 437 aa9.12□□□□□ -0.95
BEM1YBR200W YNL011CP53980 444 aa9.12□□□□□ -0.95
BEM1YBR200W LSP1Q12230 341 aaKnown RBP9.12□□□□□ -0.95
BEM1YBR200W BCK1Q01389 1478 aa9.11□□□□□ -0.95
BEM1YBR200W KNS1P32350 737 aaPredicted RBP9.1□□□□□ -0.95
BEM1YBR200W YNR029CP53729 429 aaKnown RBP9.1□□□□□ -0.95
BEM1YBR200W YMR074CQ04773 145 aa9.1□□□□□ -0.95
BEM1YBR200W HAA1Q12753 694 aaKnown RBP9.1□□□□□ -0.95
BEM1YBR200W NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.1□□□□□ -0.95not detected
BEM1YBR200W SCT1P32784 759 aa9.09□□□□□ -0.95
BEM1YBR200W TAF5P38129 798 aa9.09□□□□□ -0.95
BEM1YBR200W MRX12P47084 519 aa9.08□□□□□ -0.96
BEM1YBR200W RLP24Q07915 199 aaKnown RBP9.08□□□□□ -0.96
BEM1YBR200W ENT1Q12518 454 aa9.08□□□□□ -0.96
BEM1YBR200W RAD2P07276 1031 aa9.07□□□□□ -0.96
BEM1YBR200W SNU71P53207 620 aaKnown RBP9.07□□□□□ -0.96
BEM1YBR200W TEA1P47988 759 aa9.06□□□□□ -0.96
BEM1YBR200W SMC3P47037 1230 aa9.04□□□□□ -0.96
BEM1YBR200W ENV9Q08651 330 aa9.04□□□□□ -0.96
BEM1YBR200W ISW2Q08773 1120 aa9.04□□□□□ -0.96
BEM1YBR200W SNF2P22082 1703 aa9.04□□□□□ -0.96
BEM1YBR200W RPS0AP32905 252 aaKnown RBP9.03□□□□□ -0.96
BEM1YBR200W RAV1P47104 1357 aa9.03□□□□□ -0.96
BEM1YBR200W RTC1Q08281 1341 aa9.02□□□□□ -0.96
BEM1YBR200W RAD26P40352 1085 aa9.02□□□□□ -0.97
BEM1YBR200W MSH4P40965 878 aaPredicted RBP9.02□□□□□ -0.97
BEM1YBR200W MPP10P47083 593 aaKnown RBP9.02□□□□□ -0.97
BEM1YBR200W TOP1P04786 769 aa9.01□□□□□ -0.97
BEM1YBR200W ESL2P36168 1195 aa9.01□□□□□ -0.97
BEM1YBR200W RPG1P38249 964 aaKnown RBP9.01□□□□□ -0.97
BEM1YBR200W ITC1P53125 1264 aa9.01□□□□□ -0.97
BEM1YBR200W TPM2P40414 161 aa9□□□□□ -0.97
BEM1YBR200W BUD27P43573 796 aaKnown RBP RIP-Chip data9□□□□□ -0.97not detected
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms