RNA–Protein interactions for RNA: YBR081C

SPT7, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT7, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT7YBR081C BUD3P25558 1636 aa1.68□□□□□ -2.14
SPT7YBR081C PDR1P12383 1068 aa1.68□□□□□ -2.14
SPT7YBR081C GAR1P28007 205 aaKnown RBP1.68□□□□□ -2.14
SPT7YBR081C NUP42P49686 430 aaKnown RBP1.68□□□□□ -2.14
SPT7YBR081C TBF1Q02457 562 aa1.68□□□□□ -2.14
SPT7YBR081C MAM3Q12296 706 aa1.68□□□□□ -2.14
SPT7YBR081C HAP1P0CE41 1502 aa1.68□□□□□ -2.14
SPT7YBR081C MET5P47169 1442 aa1.68□□□□□ -2.14
SPT7YBR081C GEA2P39993 1459 aaKnown RBP1.67□□□□□ -2.14
SPT7YBR081C UBP14P38237 781 aaKnown RBP1.67□□□□□ -2.14
SPT7YBR081C JIP4Q03361 876 aa1.67□□□□□ -2.14
SPT7YBR081C CAT8P39113 1433 aa1.67□□□□□ -2.14
SPT7YBR081C TRM3Q07527 1436 aa1.67□□□□□ -2.14
SPT7YBR081C PDR10P51533 1564 aa1.67□□□□□ -2.14
SPT7YBR081C SCC2Q04002 1493 aa1.67□□□□□ -2.14
SPT7YBR081C ERF2Q06551 359 aa1.67□□□□□ -2.14
SPT7YBR081C NMA111P53920 997 aa1.66□□□□□ -2.14
SPT7YBR081C HPC2Q01448 625 aa1.66□□□□□ -2.14
SPT7YBR081C YLR326WQ06170 240 aaKnown RBP1.66□□□□□ -2.14
SPT7YBR081C BPT1P14772 1559 aa1.66□□□□□ -2.14
SPT7YBR081C CLB5P30283 435 aa1.66□□□□□ -2.14
SPT7YBR081C PTC4P38089 393 aa1.66□□□□□ -2.14
SPT7YBR081C IES2P40154 320 aa1.66□□□□□ -2.14
SPT7YBR081C DAN4P47179 1161 aa1.66□□□□□ -2.14
SPT7YBR081C DMA2P53924 522 aa1.66□□□□□ -2.14
SPT7YBR081C MMS22Q06164 1454 aa1.66□□□□□ -2.14
SPT7YBR081C IQG1Q12280 1495 aa1.66□□□□□ -2.14
SPT7YBR081C YCF1P39109 1515 aaKnown RBP1.66□□□□□ -2.14
SPT7YBR081C RKR1Q04781 1562 aa1.66□□□□□ -2.14
SPT7YBR081C PCS60P38137 543 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14not detected
SPT7YBR081C MLP2P40457 1679 aa1.66□□□□□ -2.14
SPT7YBR081C KEX1P09620 729 aa1.66□□□□□ -2.14
SPT7YBR081C ORC6P38826 435 aa1.66□□□□□ -2.14
SPT7YBR081C SEC61P32915 480 aa1.65□□□□□ -2.14
SPT7YBR081C IOC2Q12072 812 aa1.65□□□□□ -2.14
SPT7YBR081C SNT2P53127 1403 aa1.65□□□□□ -2.15
SPT7YBR081C MMS1Q06211 1407 aa1.65□□□□□ -2.15
SPT7YBR081C SPT16P32558 1035 aaKnown RBP1.65□□□□□ -2.15
SPT7YBR081C LTE1P07866 1435 aa1.65□□□□□ -2.15
SPT7YBR081C CDC25P04821 1589 aa1.65□□□□□ -2.15
SPT7YBR081C PAT1P25644 796 aaKnown RBP1.65□□□□□ -2.15
SPT7YBR081C ERG12P07277 443 aa1.64□□□□□ -2.15
SPT7YBR081C HGH1P48362 394 aaKnown RBP1.64□□□□□ -2.15
SPT7YBR081C YPR109WQ06104 294 aa1.64□□□□□ -2.15
SPT7YBR081C CSC1Q06538 782 aa1.64□□□□□ -2.15
SPT7YBR081C TFB4Q12004 338 aa1.64□□□□□ -2.15
SPT7YBR081C FKH1P40466 484 aa1.64□□□□□ -2.15
SPT7YBR081C DNF1P32660 1571 aa1.64□□□□□ -2.15
SPT7YBR081C ESC1Q03661 1658 aaKnown RBP1.64□□□□□ -2.15
SPT7YBR081C KIP2P28743 706 aa1.64□□□□□ -2.15
SPT7YBR081C PAN1P32521 1480 aa1.64□□□□□ -2.15
SPT7YBR081C MPC54Q08550 464 aa1.64□□□□□ -2.15
SPT7YBR081C PDR12Q02785 1511 aa1.63□□□□□ -2.15
SPT7YBR081C TRM732Q03496 1420 aa1.63□□□□□ -2.15
SPT7YBR081C CFT1Q06632 1357 aaKnown RBP1.63□□□□□ -2.15
SPT7YBR081C KIN1P13185 1064 aa1.63□□□□□ -2.15
SPT7YBR081C ARG8P18544 423 aa1.63□□□□□ -2.15
SPT7YBR081C PKC1P24583 1151 aa1.63□□□□□ -2.15
SPT7YBR081C RPL34BP40525 121 aaKnown RBP1.63□□□□□ -2.15
SPT7YBR081C RRN7P40992 514 aa1.63□□□□□ -2.15
SPT7YBR081C RTF1P53064 558 aa1.63□□□□□ -2.15
SPT7YBR081C AIR2Q12476 344 aaKnown RBP1.63□□□□□ -2.15
SPT7YBR081C SRF1Q12516 437 aa1.63□□□□□ -2.15
SPT7YBR081C SPP41P38904 1435 aa1.63□□□□□ -2.15
SPT7YBR081C SIT4P20604 311 aa1.63□□□□□ -2.15
SPT7YBR081C SLI15P38283 698 aa1.63□□□□□ -2.15
SPT7YBR081C HAP5Q02516 242 aa1.63□□□□□ -2.15
SPT7YBR081C SSA2P10592 639 aaKnown RBP1.63□□□□□ -2.15
SPT7YBR081C SLY41P22215 453 aa1.62□□□□□ -2.15
SPT7YBR081C YJU3P28321 313 aa1.62□□□□□ -2.15
SPT7YBR081C BCK2P33306 851 aa1.62□□□□□ -2.15
SPT7YBR081C URN1Q06525 465 aaKnown RBP1.62□□□□□ -2.15
SPT7YBR081C UFD4P33202 1483 aa1.62□□□□□ -2.15
SPT7YBR081C RGR1P19263 1082 aa1.62□□□□□ -2.15
SPT7YBR081C MVP1P40959 511 aaKnown RBP1.62□□□□□ -2.15
SPT7YBR081C DPL1Q05567 589 aa1.62□□□□□ -2.15
SPT7YBR081C NUP170P38181 1502 aa1.62□□□□□ -2.15
SPT7YBR081C TSC11P40061 1430 aa1.62□□□□□ -2.15
SPT7YBR081C VTH1P40438 1549 aa1.62□□□□□ -2.15
SPT7YBR081C VTH2P40890 1549 aa1.62□□□□□ -2.15
SPT7YBR081C DPS1P04802 557 aaKnown RBP1.62□□□□□ -2.15
SPT7YBR081C KEX2P13134 814 aa1.62□□□□□ -2.15
SPT7YBR081C CSE4P36012 229 aa1.62□□□□□ -2.15
SPT7YBR081C HST2P53686 357 aa1.62□□□□□ -2.15
SPT7YBR081C YPR015CQ12531 247 aa1.62□□□□□ -2.15
SPT7YBR081C PDR5P33302 1511 aaKnown RBP1.61□□□□□ -2.15
SPT7YBR081C RLF2Q12495 606 aa1.61□□□□□ -2.15
SPT7YBR081C CHL1P22516 861 aaPredicted RBP1.61□□□□□ -2.15
SPT7YBR081C ESS1P22696 170 aa1.61□□□□□ -2.15
SPT7YBR081C PUS5Q06244 254 aa1.61□□□□□ -2.15
SPT7YBR081C SNQ2P32568 1501 aaKnown RBP1.61□□□□□ -2.15
SPT7YBR081C GEA1P47102 1408 aaPredicted RBP1.61□□□□□ -2.15
SPT7YBR081C SPT5P27692 1063 aaKnown RBP1.61□□□□□ -2.15
SPT7YBR081C KTR7P40504 517 aa1.61□□□□□ -2.15
SPT7YBR081C PKH3Q03306 898 aaPredicted RBP1.61□□□□□ -2.15
SPT7YBR081C NTE1Q04958 1679 aa1.61□□□□□ -2.15
SPT7YBR081C TPD3P31383 635 aa1.6□□□□□ -2.15
SPT7YBR081C NUD1P32336 851 aa1.6□□□□□ -2.15
SPT7YBR081C PRE3P38624 215 aa1.6□□□□□ -2.15
SPT7YBR081C BUB1P41695 1021 aaKnown RBP RIP-Chip data1.6□□□□□ -2.15not detected
Retrieved 100 of 5,963 RNA–protein pairs in 374.2 ms