RNA–Protein interactions for RNA: YBR074W

PFF1, Transcript of Multi-spanning vacuolar membrane protease, yeastyeast

Gene PFF1, Length 2,931 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFF1YBR074W CDC73Q06697 393 aa3.88□□□□□ -1.79
PFF1YBR074W ESC1Q03661 1658 aaKnown RBP3.88□□□□□ -1.79
PFF1YBR074W IES2P40154 320 aa3.87□□□□□ -1.79
PFF1YBR074W TFB4Q12004 338 aa3.87□□□□□ -1.79
PFF1YBR074W PTC2P39966 464 aaKnown RBP3.87□□□□□ -1.79
PFF1YBR074W ATG2P53855 1592 aa3.86□□□□□ -1.79
PFF1YBR074W SMC4Q12267 1418 aa3.85□□□□□ -1.79
PFF1YBR074W BNI4P53858 892 aa3.85□□□□□ -1.79
PFF1YBR074W NPL4P33755 580 aa3.84□□□□□ -1.79
PFF1YBR074W PSE1P32337 1089 aaKnown RBP3.84□□□□□ -1.8
PFF1YBR074W ATF2P53296 535 aa3.84□□□□□ -1.8
PFF1YBR074W CLB5P30283 435 aa3.83□□□□□ -1.8
PFF1YBR074W BCK2P33306 851 aa3.83□□□□□ -1.8
PFF1YBR074W YRR1Q12172 810 aa3.83□□□□□ -1.8
PFF1YBR074W TAF2P23255 1407 aa3.83□□□□□ -1.8
PFF1YBR074W DNF1P32660 1571 aa3.83□□□□□ -1.8
PFF1YBR074W ENP1P38333 483 aaKnown RBP3.83□□□□□ -1.8
PFF1YBR074W TUM1Q08686 304 aaKnown RBP3.83□□□□□ -1.8
PFF1YBR074W TY1B-DR3Q99231 1755 aa3.83□□□□□ -1.8
PFF1YBR074W SCC2Q04002 1493 aa3.82□□□□□ -1.8
PFF1YBR074W YPR109WQ06104 294 aa3.82□□□□□ -1.8
PFF1YBR074W ORC6P38826 435 aa3.82□□□□□ -1.8
PFF1YBR074W RKR1Q04781 1562 aa3.82□□□□□ -1.8
PFF1YBR074W RPO31P04051 1460 aa3.82□□□□□ -1.8
PFF1YBR074W ULS1Q08562 1619 aa3.82□□□□□ -1.8
PFF1YBR074W SNQ2P32568 1501 aaKnown RBP3.82□□□□□ -1.8
PFF1YBR074W YLR419WQ06698 1435 aaKnown RBP3.81□□□□□ -1.8
PFF1YBR074W SEC3P33332 1336 aaKnown RBP3.81□□□□□ -1.8
PFF1YBR074W BPT1P14772 1559 aa3.81□□□□□ -1.8
PFF1YBR074W LEU3P08638 886 aa3.81□□□□□ -1.8
PFF1YBR074W VRP1P37370 817 aa3.81□□□□□ -1.8
PFF1YBR074W YNR021WP53723 404 aaKnown RBP3.81□□□□□ -1.8
PFF1YBR074W BUD4P47136 1447 aa3.8□□□□□ -1.8
PFF1YBR074W MVP1P40959 511 aaKnown RBP3.8□□□□□ -1.8
PFF1YBR074W YML082WQ04533 649 aaKnown RBP3.8□□□□□ -1.8
PFF1YBR074W TEA1P47988 759 aa3.8□□□□□ -1.8
PFF1YBR074W RGR1P19263 1082 aa3.79□□□□□ -1.8
PFF1YBR074W DIT2P21595 489 aa3.79□□□□□ -1.8
PFF1YBR074W TY2B-LR1P0C2J3 1770 aa3.79□□□□□ -1.8
PFF1YBR074W TY2B-FP0CX63 1770 aa3.79□□□□□ -1.8
PFF1YBR074W TY2B-GR2P0CX64 1770 aa3.79□□□□□ -1.8
PFF1YBR074W TY2B-CP25384 1770 aa3.79□□□□□ -1.8
PFF1YBR074W TY2B-DR2Q03494 1770 aa3.79□□□□□ -1.8
PFF1YBR074W TY1B-DR1Q03855 1755 aa3.79□□□□□ -1.8
PFF1YBR074W TY2B-DR3Q07791 1770 aaKnown RBP3.79□□□□□ -1.8
PFF1YBR074W TY2B-OR1Q12113 1770 aa3.79□□□□□ -1.8
PFF1YBR074W TY2B-DR1Q12472 1770 aa3.79□□□□□ -1.8
PFF1YBR074W TY2B-OR2Q12501 1770 aa3.79□□□□□ -1.8
PFF1YBR074W YCF1P39109 1515 aaKnown RBP3.79□□□□□ -1.8
PFF1YBR074W GCN2P15442 1659 aa3.79□□□□□ -1.8
PFF1YBR074W RPN1P38764 993 aaKnown RBP3.79□□□□□ -1.8
PFF1YBR074W NUP42P49686 430 aaKnown RBP3.79□□□□□ -1.8
PFF1YBR074W GYP1Q08484 637 aa3.79□□□□□ -1.8
PFF1YBR074W YDR344CQ05510 147 aa3.78□□□□□ -1.8
PFF1YBR074W YBT1P32386 1661 aa3.78□□□□□ -1.8
PFF1YBR074W TY2B-BQ12491 1770 aa3.78□□□□□ -1.8
PFF1YBR074W TY3B-GQ99315 1547 aa3.78□□□□□ -1.8
PFF1YBR074W TOP2P06786 1428 aaKnown RBP3.78□□□□□ -1.81
PFF1YBR074W GAP1P19145 602 aaPredicted RBP3.77□□□□□ -1.81
PFF1YBR074W YMR196WQ04336 1088 aa3.77□□□□□ -1.81
PFF1YBR074W NUD1P32336 851 aa3.77□□□□□ -1.81
PFF1YBR074W GCD11P32481 527 aaKnown RBP3.77□□□□□ -1.81
PFF1YBR074W SRB8P25648 1427 aa3.77□□□□□ -1.81
PFF1YBR074W PDR1P12383 1068 aa3.77□□□□□ -1.81
PFF1YBR074W PAT1P25644 796 aaKnown RBP3.77□□□□□ -1.81
PFF1YBR074W XDJ1P39102 459 aa3.77□□□□□ -1.81
PFF1YBR074W SAS4Q04003 481 aa3.76□□□□□ -1.81
PFF1YBR074W NUP159P40477 1460 aa3.76□□□□□ -1.81
PFF1YBR074W GLC3P32775 704 aa3.76□□□□□ -1.81
PFF1YBR074W MDS3P53094 1487 aa3.75□□□□□ -1.81
PFF1YBR074W TY1B-HO13535 1793 aa3.75□□□□□ -1.81
PFF1YBR074W TY1B-DR5P0C2I2 1755 aa3.75□□□□□ -1.81
PFF1YBR074W TY1B-DR6P0C2I3 1755 aa3.75□□□□□ -1.81
PFF1YBR074W TY1B-LR2P0C2I5 1755 aa3.75□□□□□ -1.81
PFF1YBR074W TY1B-LR3P0C2I6 1755 aaKnown RBP3.75□□□□□ -1.81
PFF1YBR074W TY1B-PR1P0C2I9 1755 aaKnown RBP3.75□□□□□ -1.81
PFF1YBR074W TY1B-PR2P0C2J0 1756 aa3.75□□□□□ -1.81
PFF1YBR074W TY1B-PR3P0C2J1 1755 aaKnown RBP3.75□□□□□ -1.81
PFF1YBR074W TY1B-JR1P47098 1755 aa3.75□□□□□ -1.81
PFF1YBR074W TY1B-ML2Q03434 1755 aaKnown RBP3.75□□□□□ -1.81
PFF1YBR074W TY1B-ER1Q03612 1755 aa3.75□□□□□ -1.81
PFF1YBR074W TY1B-ML1Q04711 1755 aaKnown RBP3.75□□□□□ -1.81
PFF1YBR074W TY1B-GR2Q12269 1755 aa3.75□□□□□ -1.81
PFF1YBR074W TY1B-OLQ12273 1755 aa3.75□□□□□ -1.81
PFF1YBR074W TY1B-PLQ12414 1755 aaKnown RBP3.75□□□□□ -1.81
PFF1YBR074W AIM7Q12156 149 aa3.74□□□□□ -1.81
PFF1YBR074W PDR15Q04182 1529 aaKnown RBP3.74□□□□□ -1.81
PFF1YBR074W PRT1P06103 763 aaKnown RBP3.74□□□□□ -1.81
PFF1YBR074W MRF1P30775 413 aaPredicted RBP3.74□□□□□ -1.81
PFF1YBR074W SPT16P32558 1035 aaKnown RBP3.73□□□□□ -1.81
PFF1YBR074W ISM1P48526 1002 aa3.73□□□□□ -1.81
PFF1YBR074W TAF7Q05021 590 aa3.73□□□□□ -1.81
PFF1YBR074W SSM4P40318 1319 aa3.72□□□□□ -1.81
PFF1YBR074W YEL077CQ3E7X8 1277 aa3.72□□□□□ -1.81
PFF1YBR074W IQG1Q12280 1495 aa3.72□□□□□ -1.81
PFF1YBR074W RTF1P53064 558 aa3.71□□□□□ -1.81
PFF1YBR074W TY1B-BRQ12193 1756 aa3.71□□□□□ -1.81
PFF1YBR074W TY1B-GR3Q12316 1755 aa3.71□□□□□ -1.81
PFF1YBR074W TY1B-ORQ92393 1755 aa3.71□□□□□ -1.81
PFF1YBR074W ERG12P07277 443 aa3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms