RNA–Protein interactions for RNA: YBL014C

RRN6, Transcript of Component of the core factor (CF) rDNA transcription factor complex, yeast

Gene RRN6, Length 2,685 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRN6	YBL014C	URN1	Q06525	465 aa	Known RBP	5	□□□□□ -1.61
RRN6	YBL014C	YPR148C	Q06523	435 aa		4.98	□□□□□ -1.61
RRN6	YBL014C	PDR11	P40550	1411 aa		4.98	□□□□□ -1.61
RRN6	YBL014C	BDF1	P35817	686 aa		4.97	□□□□□ -1.61
RRN6	YBL014C	SET1	P38827	1080 aa	Known RBP	4.97	□□□□□ -1.61
RRN6	YBL014C	MRM1	P25270	412 aa		4.97	□□□□□ -1.61
RRN6	YBL014C	NUP192	P47054	1683 aa		4.96	□□□□□ -1.62
RRN6	YBL014C	ABP1	P15891	592 aa	Known RBP	4.96	□□□□□ -1.62
RRN6	YBL014C	NOP7	P53261	605 aa	Known RBP	4.95	□□□□□ -1.62
RRN6	YBL014C	RAV1	P47104	1357 aa		4.95	□□□□□ -1.62
RRN6	YBL014C	PAF1	P38351	445 aa		4.93	□□□□□ -1.62
RRN6	YBL014C	RPN1	P38764	993 aa	Known RBP	4.93	□□□□□ -1.62
RRN6	YBL014C	RTC1	Q08281	1341 aa		4.92	□□□□□ -1.62
RRN6	YBL014C	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.92	□□□□□ -1.62
RRN6	YBL014C	POL5	P39985	1022 aa	Known RBP	4.91	□□□□□ -1.62
RRN6	YBL014C	MAK11	P20484	414 aa	Known RBP	4.91	□□□□□ -1.62
RRN6	YBL014C	RTG3	P38165	486 aa		4.9	□□□□□ -1.62
RRN6	YBL014C	VPS70	P47161	811 aa		4.9	□□□□□ -1.62
RRN6	YBL014C	SCY1	P53009	804 aa		4.9	□□□□□ -1.63
RRN6	YBL014C	YAP3	P38749	330 aa		4.89	□□□□□ -1.63
RRN6	YBL014C	DMA2	P53924	522 aa		4.89	□□□□□ -1.63
RRN6	YBL014C	TYS1	P36421	394 aa	Known RBP	4.88	□□□□□ -1.63
RRN6	YBL014C	VPS29	P38759	282 aa		4.88	□□□□□ -1.63
RRN6	YBL014C	IPL1	P38991	367 aa		4.88	□□□□□ -1.63
RRN6	YBL014C	CFT1	Q06632	1357 aa	Known RBP	4.87	□□□□□ -1.63
RRN6	YBL014C	MAP2	P38174	421 aa	Known RBP	4.86	□□□□□ -1.63
RRN6	YBL014C	DSF2	P38213	736 aa		4.86	□□□□□ -1.63
RRN6	YBL014C	SPB4	P25808	606 aa	Predicted RBP	4.86	□□□□□ -1.63
RRN6	YBL014C	YLR419W	Q06698	1435 aa	Known RBP	4.85	□□□□□ -1.63
RRN6	YBL014C	BCK1	Q01389	1478 aa		4.85	□□□□□ -1.63
RRN6	YBL014C	TAF5	P38129	798 aa		4.85	□□□□□ -1.63
RRN6	YBL014C	MHP1	P43638	1398 aa		4.84	□□□□□ -1.63
RRN6	YBL014C	YFR006W	P43590	535 aa		4.84	□□□□□ -1.63
RRN6	YBL014C	UBP10	P53874	792 aa	Predicted RBP	4.84	□□□□□ -1.63
RRN6	YBL014C	USO1	P25386	1790 aa		4.83	□□□□□ -1.64
RRN6	YBL014C	COQ8	P27697	501 aa		4.83	□□□□□ -1.64
RRN6	YBL014C	ESL2	P36168	1195 aa		4.83	□□□□□ -1.64
RRN6	YBL014C	YMR196W	Q04336	1088 aa		4.83	□□□□□ -1.64
RRN6	YBL014C	MLP1	Q02455	1875 aa	Known RBP	4.83	□□□□□ -1.64
RRN6	YBL014C	ORC1	P54784	914 aa	Predicted RBP	4.82	□□□□□ -1.64
RRN6	YBL014C	MAK10	Q02197	733 aa		4.82	□□□□□ -1.64
RRN6	YBL014C	RAD9	P14737	1309 aa		4.82	□□□□□ -1.64
RRN6	YBL014C	SEC3	P33332	1336 aa	Known RBP	4.82	□□□□□ -1.64
RRN6	YBL014C	PBS2	P08018	668 aa		4.81	□□□□□ -1.64
RRN6	YBL014C	STS1	P38637	319 aa		4.81	□□□□□ -1.64
RRN6	YBL014C	SPT7	P35177	1332 aa		4.81	□□□□□ -1.64
RRN6	YBL014C	KIP3	P53086	805 aa	Known RBP	4.8	□□□□□ -1.64
RRN6	YBL014C	EDS1	P38073	919 aa		4.8	□□□□□ -1.64
RRN6	YBL014C	ALD4	P46367	519 aa	Known RBP	4.79	□□□□□ -1.64
RRN6	YBL014C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
RRN6	YBL014C	NOP53	Q12080	455 aa	Known RBP	4.79	□□□□□ -1.64
RRN6	YBL014C	KRE5	P22023	1365 aa		4.78	□□□□□ -1.64
RRN6	YBL014C	SPE2	P21182	396 aa		4.78	□□□□□ -1.64
RRN6	YBL014C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
RRN6	YBL014C	CAB1	Q04430	367 aa		4.78	□□□□□ -1.64
RRN6	YBL014C	TAF8	Q03750	510 aa		4.77	□□□□□ -1.65
RRN6	YBL014C	ENP1	P38333	483 aa	Known RBP	4.77	□□□□□ -1.65
RRN6	YBL014C	YNR021W	P53723	404 aa	Known RBP	4.77	□□□□□ -1.65
RRN6	YBL014C	SLX5	P32828	619 aa	Known RBP	4.76	□□□□□ -1.65
RRN6	YBL014C	NUP42	P49686	430 aa	Known RBP	4.76	□□□□□ -1.65
RRN6	YBL014C	PDS5	Q04264	1277 aa		4.75	□□□□□ -1.65
RRN6	YBL014C	KIN1	P13185	1064 aa		4.75	□□□□□ -1.65
RRN6	YBL014C	DBP1	P24784	617 aa	Known RBP	4.74	□□□□□ -1.65
RRN6	YBL014C	SCT1	P32784	759 aa		4.74	□□□□□ -1.65
RRN6	YBL014C	MRX12	P47084	519 aa		4.74	□□□□□ -1.65
RRN6	YBL014C	EDE1	P34216	1381 aa		4.73	□□□□□ -1.65
RRN6	YBL014C	DIT2	P21595	489 aa		4.73	□□□□□ -1.65
RRN6	YBL014C	GLC3	P32775	704 aa		4.73	□□□□□ -1.65
RRN6	YBL014C	REF2	P42073	533 aa	Predicted RBP	4.73	□□□□□ -1.65
RRN6	YBL014C	MAM3	Q12296	706 aa		4.73	□□□□□ -1.65
RRN6	YBL014C	YML133C	Q03099	1374 aa		4.73	□□□□□ -1.65
RRN6	YBL014C	YLL067C	Q07888	1374 aa		4.73	□□□□□ -1.65
RRN6	YBL014C	YLL066C	Q99208	1374 aa		4.73	□□□□□ -1.65
RRN6	YBL014C	NAP1	P25293	417 aa	Known RBP	4.73	□□□□□ -1.65
RRN6	YBL014C	IES2	P40154	320 aa		4.73	□□□□□ -1.65
RRN6	YBL014C	RIA1	P53893	1110 aa		4.73	□□□□□ -1.65
RRN6	YBL014C	NST1	P53935	1240 aa		4.73	□□□□□ -1.65
RRN6	YBL014C	AIM7	Q12156	149 aa		4.73	□□□□□ -1.65
RRN6	YBL014C	TY4B-H	P0C2J7	1802 aa		4.73	□□□□□ -1.65
RRN6	YBL014C	TY4B-J	P47024	1803 aa		4.73	□□□□□ -1.65
RRN6	YBL014C	RLF2	Q12495	606 aa		4.72	□□□□□ -1.65
RRN6	YBL014C	PTC3	P34221	468 aa	Known RBP	4.71	□□□□□ -1.65
RRN6	YBL014C	CHZ1	P40019	153 aa	Predicted RBP	4.71	□□□□□ -1.65
RRN6	YBL014C	YRF1-2	P40105	1681 aa		4.71	□□□□□ -1.65
RRN6	YBL014C	PSK1	P31374	1356 aa		4.71	□□□□□ -1.66
RRN6	YBL014C	SNF2	P22082	1703 aa		4.71	□□□□□ -1.66
RRN6	YBL014C	YGL015C	P33199	130 aa		4.71	□□□□□ -1.66
RRN6	YBL014C	FKH1	P40466	484 aa		4.7	□□□□□ -1.66
RRN6	YBL014C	COX6	P00427	148 aa		4.69	□□□□□ -1.66
RRN6	YBL014C	YNR029C	P53729	429 aa	Known RBP	4.69	□□□□□ -1.66
RRN6	YBL014C	RCM1	P53972	490 aa		4.69	□□□□□ -1.66
RRN6	YBL014C	YOR238W	Q08634	303 aa		4.69	□□□□□ -1.66
RRN6	YBL014C	PPH3	P32345	308 aa		4.69	□□□□□ -1.66
RRN6	YBL014C	YIL177C	P40434	1758 aa		4.68	□□□□□ -1.66
RRN6	YBL014C	YJL225C	P40889	1758 aa		4.68	□□□□□ -1.66
RRN6	YBL014C	GUA1	P38625	525 aa	Known RBP	4.68	□□□□□ -1.66
RRN6	YBL014C	YDR090C	Q03193	310 aa		4.68	□□□□□ -1.66
RRN6	YBL014C	MAK21	Q12176	1025 aa	Known RBP	4.68	□□□□□ -1.66
RRN6	YBL014C	CPS1	P27614	576 aa		4.67	□□□□□ -1.66
RRN6	YBL014C	PRS1	P32895	427 aa	Known RBP	4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 53.8 ms