RNA–Protein interactions for RNA: ENST00000639956.1

SPIN3-232, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,998 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-232ENST00000639956 CFDP1Q9UEE9 299 aaPredicted RBP17.21■□□□□ 0.35
SPIN3-232ENST00000639956 KDM2AQ9Y2K7 1162 aa17.19■□□□□ 0.34
SPIN3-232ENST00000639956 B4GALNT3Q6L9W6 998 aa17.19■□□□□ 0.34
SPIN3-232ENST00000639956 IQGAP2Q13576 1575 aa17.17■□□□□ 0.34
SPIN3-232ENST00000639956 CHMP7Q8WUX9 453 aaPredicted RBP17.17■□□□□ 0.34
SPIN3-232ENST00000639956 KIF7Q2M1P5 1343 aa17.17■□□□□ 0.34
SPIN3-232ENST00000639956 CCDC7Q96M83 1385 aa17.16■□□□□ 0.34
SPIN3-232ENST00000639956 PRG4Q92954 1404 aaPredicted RBP17.16■□□□□ 0.34
SPIN3-232ENST00000639956 TARBP1Q13395 1621 aaKnown RBP17.15■□□□□ 0.34
SPIN3-232ENST00000639956 CDK11AQ9UQ88 783 aaPredicted RBP17.15■□□□□ 0.34
SPIN3-232ENST00000639956 PKD2Q13563 968 aa17.14■□□□□ 0.33
SPIN3-232ENST00000639956 HECW1Q76N89 1606 aa17.14■□□□□ 0.33
SPIN3-232ENST00000639956 ABCC5O15440 1437 aa17.14■□□□□ 0.33
SPIN3-232ENST00000639956 DAPK1P53355 1430 aa17.14■□□□□ 0.33
SPIN3-232ENST00000639956 ANKRD30BQ9BXX2 1392 aa17.13■□□□□ 0.33
SPIN3-232ENST00000639956 ARHGEF11O15085 1522 aa17.13■□□□□ 0.33
SPIN3-232ENST00000639956 CNTLNQ9NXG0 1405 aa17.13■□□□□ 0.33
SPIN3-232ENST00000639956 TCOF1Q13428 1488 aaKnown RBP17.12■□□□□ 0.33
SPIN3-232ENST00000639956 SALL2Q9Y467 1007 aaPredicted RBP17.11■□□□□ 0.33
SPIN3-232ENST00000639956 MSH5O43196 834 aa17.1■□□□□ 0.33
SPIN3-232ENST00000639956 MIA2Q96PC5 1412 aa17.09■□□□□ 0.33
SPIN3-232ENST00000639956 WDR62O43379 1518 aa17.08■□□□□ 0.32
SPIN3-232ENST00000639956 PLB1Q6P1J6 1458 aa17.07■□□□□ 0.32
SPIN3-232ENST00000639956 PBRM1Q86U86 1689 aa17.06■□□□□ 0.32
SPIN3-232ENST00000639956 NUP153P49790 1475 aaKnown RBP17.06■□□□□ 0.32
SPIN3-232ENST00000639956 NCOA1Q15788 1441 aa17.06■□□□□ 0.32
SPIN3-232ENST00000639956 ADAMTS12P58397 1594 aa17.06■□□□□ 0.32
SPIN3-232ENST00000639956 MRC2Q9UBG0 1479 aa17.04■□□□□ 0.32
SPIN3-232ENST00000639956 HNRNPMP52272 730 aaKnown RBP eCLIP17.04■□□□□ 0.32
SPIN3-232ENST00000639956 DISP1Q96F81 1524 aa17.03■□□□□ 0.32
SPIN3-232ENST00000639956 RPRD2Q5VT52 1461 aaKnown RBP17.03■□□□□ 0.32
SPIN3-232ENST00000639956 GCC2Q8IWJ2 1684 aa17.03■□□□□ 0.32
SPIN3-232ENST00000639956 RGL3Q3MIN7 710 aa17.02■□□□□ 0.32
SPIN3-232ENST00000639956 JPH4Q96JJ6 628 aa17.02■□□□□ 0.32
SPIN3-232ENST00000639956 CARD11Q9BXL7 1154 aa17.02■□□□□ 0.31
SPIN3-232ENST00000639956 PPP4R2Q9NY27 417 aa17.02■□□□□ 0.31
SPIN3-232ENST00000639956 ERICH6Q7L0X2 663 aa17.01■□□□□ 0.31
SPIN3-232ENST00000639956 DCAF11Q8TEB1 546 aa17.01■□□□□ 0.31
SPIN3-232ENST00000639956 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.31
SPIN3-232ENST00000639956 USP47Q96K76 1375 aa17■□□□□ 0.31
SPIN3-232ENST00000639956 PLEKHD1A6NEE1 506 aa17■□□□□ 0.31
SPIN3-232ENST00000639956 NUP155O75694 1391 aa17■□□□□ 0.31
SPIN3-232ENST00000639956 TEX14Q8IWB6 1497 aa17■□□□□ 0.31
SPIN3-232ENST00000639956 KIAA0586Q9BVV6 1533 aa16.99■□□□□ 0.31
SPIN3-232ENST00000639956 AKNAQ7Z591 1439 aa16.98■□□□□ 0.31
SPIN3-232ENST00000639956 TMC1Q8TDI8 760 aa16.98■□□□□ 0.31
SPIN3-232ENST00000639956 ZBED9Q6R2W3 1325 aa16.98■□□□□ 0.31
SPIN3-232ENST00000639956 ST20-MTHFSA0A0A6YYL1 179 aa16.98■□□□□ 0.31
SPIN3-232ENST00000639956 ROCK1Q13464 1354 aa16.97■□□□□ 0.31
SPIN3-232ENST00000639956 CAMSAP2Q08AD1 1489 aa16.97■□□□□ 0.31
SPIN3-232ENST00000639956 TSPY4P0CV99 314 aa16.96■□□□□ 0.31
SPIN3-232ENST00000639956 TSPY10P0CW01 314 aa16.96■□□□□ 0.31
SPIN3-232ENST00000639956 KIAA0556O60303 1618 aa16.96■□□□□ 0.31
SPIN3-232ENST00000639956 PZPP20742 1482 aa16.96■□□□□ 0.3
SPIN3-232ENST00000639956 ERCC6Q03468 1493 aa16.96■□□□□ 0.3
SPIN3-232ENST00000639956 GRIN2AQ12879 1464 aa16.95■□□□□ 0.3
SPIN3-232ENST00000639956 TROQ12816 1431 aaPredicted RBP16.95■□□□□ 0.3
SPIN3-232ENST00000639956 SPATA31E1Q6ZUB1 1445 aa16.94■□□□□ 0.3
SPIN3-232ENST00000639956 GPATCH8Q9UKJ3 1502 aaKnown RBP16.93■□□□□ 0.3
SPIN3-232ENST00000639956 IFT140Q96RY7 1462 aa16.93■□□□□ 0.3
SPIN3-232ENST00000639956 ANKRD50Q9ULJ7 1429 aa16.92■□□□□ 0.3
SPIN3-232ENST00000639956 ANKRD30AQ9BXX3 1397 aa16.92■□□□□ 0.3
SPIN3-232ENST00000639956 DNMT1P26358 1616 aaKnown RBP16.92■□□□□ 0.3
SPIN3-232ENST00000639956 RAPGEF6Q8TEU7 1601 aa16.92■□□□□ 0.3
SPIN3-232ENST00000639956 KIF14Q15058 1648 aa16.91■□□□□ 0.3
SPIN3-232ENST00000639956 KIAA1107Q9UPP5 1409 aa16.91■□□□□ 0.3
SPIN3-232ENST00000639956 CCDC136Q96JN2 1154 aa16.89■□□□□ 0.3
SPIN3-232ENST00000639956 DHX29Q7Z478 1369 aaKnown RBP16.89■□□□□ 0.29
SPIN3-232ENST00000639956 NBPF1Q3BBV0 1214 aa16.87■□□□□ 0.29
SPIN3-232ENST00000639956 NUDCQ9Y266 331 aa16.86■□□□□ 0.29
SPIN3-232ENST00000639956 CC2D1BQ5T0F9 858 aaKnown RBP16.85■□□□□ 0.29
SPIN3-232ENST00000639956 EIF4G3O43432 1585 aaKnown RBP16.85■□□□□ 0.29
SPIN3-232ENST00000639956 PNISRQ8TF01 805 aaKnown RBP16.85■□□□□ 0.29
SPIN3-232ENST00000639956 BCORL1Q5H9F3 1711 aa16.84■□□□□ 0.29
SPIN3-232ENST00000639956 CARMIL2Q6F5E8 1435 aa16.83■□□□□ 0.29
SPIN3-232ENST00000639956 C9orf84Q5VXU9 1444 aa16.83■□□□□ 0.28
SPIN3-232ENST00000639956 NBR1Q14596 966 aa16.83■□□□□ 0.28
SPIN3-232ENST00000639956 ROCK2O75116 1388 aaKnown RBP16.82■□□□□ 0.28
SPIN3-232ENST00000639956 KIF15Q9NS87 1388 aa16.82■□□□□ 0.28
SPIN3-232ENST00000639956 CEP170Q5SW79 1584 aa16.82■□□□□ 0.28
SPIN3-232ENST00000639956 FANCIQ9NVI1 1328 aa16.81■□□□□ 0.28
SPIN3-232ENST00000639956 ERICH6BQ5W0A0 696 aa16.78■□□□□ 0.28
SPIN3-232ENST00000639956 NPM2Q86SE8 214 aaKnown RBP16.78■□□□□ 0.28
SPIN3-232ENST00000639956 ATP10BO94823 1461 aa16.78■□□□□ 0.28
SPIN3-232ENST00000639956 CDCA7LQ96GN5 454 aa16.77■□□□□ 0.28
SPIN3-232ENST00000639956 PAK3O75914 559 aaPredicted RBP16.77■□□□□ 0.28
SPIN3-232ENST00000639956 BCL11AQ9H165 835 aa16.77■□□□□ 0.28
SPIN3-232ENST00000639956 SYNJ2O15056 1496 aa16.76■□□□□ 0.27
SPIN3-232ENST00000639956 PLIN1O60240 522 aa16.76■□□□□ 0.27
SPIN3-232ENST00000639956 SKAP1Q86WV1 359 aa16.75■□□□□ 0.27
SPIN3-232ENST00000639956 EXOC6Q8TAG9 804 aa16.75■□□□□ 0.27
SPIN3-232ENST00000639956 MAGI1Q96QZ7 1491 aaPredicted RBP16.75■□□□□ 0.27
SPIN3-232ENST00000639956 SMG6Q86US8 1419 aaKnown RBP16.74■□□□□ 0.27
SPIN3-232ENST00000639956 MBD5Q9P267 1494 aa16.74■□□□□ 0.27
SPIN3-232ENST00000639956 MYBBP1AQ9BQG0 1328 aaKnown RBP16.72■□□□□ 0.27
SPIN3-232ENST00000639956 PTPRGP23470 1445 aa16.72■□□□□ 0.27
SPIN3-232ENST00000639956 PANK3Q9H999 370 aa16.7■□□□□ 0.26
SPIN3-232ENST00000639956 KDM5CP41229 1560 aa16.7■□□□□ 0.26
SPIN3-232ENST00000639956 ADGRL2O95490 1459 aa16.7■□□□□ 0.26
SPIN3-232ENST00000639956 MYT1LQ9UL68 1186 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms