RNA–Protein interactions for RNA: ENST00000639956.1

SPIN3-232, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,998 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-232ENST00000639956 NISCHQ9Y2I1 1504 aa25.1■■□□□ 1.61
SPIN3-232ENST00000639956 SHROOM4Q9ULL8 1493 aa22.24■■□□□ 1.15
SPIN3-232ENST00000639956 SUPT5HO00267 1087 aaKnown RBP21.87■■□□□ 1.09
SPIN3-232ENST00000639956 DCAF8L2P0C7V8 631 aa21.69■■□□□ 1.06
SPIN3-232ENST00000639956 ZCCHC6Q5VYS8 1495 aaKnown RBP21.18■□□□□ 0.98
SPIN3-232ENST00000639956 CHIC1Q5VXU3 224 aa20.99■□□□□ 0.95
SPIN3-232ENST00000639956 CCDC180Q9P1Z9 1646 aa20.92■□□□□ 0.94
SPIN3-232ENST00000639956 MYO15BQ96JP2 1530 aa20.91■□□□□ 0.94
SPIN3-232ENST00000639956 PCGF6Q9BYE7 350 aa20.74■□□□□ 0.91
SPIN3-232ENST00000639956 LOC105371045A0A1W2PR82 267 aa20.67■□□□□ 0.9
SPIN3-232ENST00000639956 HRCP23327 699 aa20.51■□□□□ 0.87
SPIN3-232ENST00000639956 PPARGC1BQ86YN6 1023 aaKnown RBP20.47■□□□□ 0.87
SPIN3-232ENST00000639956 EHMT2Q96KQ7 1210 aa20.44■□□□□ 0.86
SPIN3-232ENST00000639956 FAM9AQ8IZU1 332 aaPredicted RBP20.33■□□□□ 0.85
SPIN3-232ENST00000639956 DCAF1Q9Y4B6 1507 aa20.24■□□□□ 0.83
SPIN3-232ENST00000639956 SCRIBQ14160 1630 aa20.19■□□□□ 0.82
SPIN3-232ENST00000639956 TRIM41Q8WV44 630 aa20.14■□□□□ 0.82
SPIN3-232ENST00000639956 RSF1Q96T23 1441 aaPredicted RBP20.05■□□□□ 0.8
SPIN3-232ENST00000639956 ABCC9O60706 1549 aa20.03■□□□□ 0.8
SPIN3-232ENST00000639956 TRIM26Q12899 539 aaPredicted RBP19.99■□□□□ 0.79
SPIN3-232ENST00000639956 RB1CC1Q8TDY2 1594 aa19.88■□□□□ 0.77
SPIN3-232ENST00000639956 CECR2Q9BXF3 1484 aa19.85■□□□□ 0.77
SPIN3-232ENST00000639956 TTBK1Q5TCY1 1321 aaPredicted RBP19.74■□□□□ 0.75
SPIN3-232ENST00000639956 MROH2BQ7Z745 1585 aa19.67■□□□□ 0.74
SPIN3-232ENST00000639956 WIZO95785 1651 aa19.57■□□□□ 0.72
SPIN3-232ENST00000639956 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.5■□□□□ 0.71
SPIN3-232ENST00000639956 NACADO15069 1562 aa19.48■□□□□ 0.71
SPIN3-232ENST00000639956 ZEB1P37275 1124 aaPredicted RBP19.44■□□□□ 0.7
SPIN3-232ENST00000639956 PABPN1Q86U42 306 aaKnown RBP eCLIP19.43■□□□□ 0.7
SPIN3-232ENST00000639956 CCER1Q8TC90 406 aaPredicted RBP19.36■□□□□ 0.69
SPIN3-232ENST00000639956 ABCC8Q09428 1581 aa19.32■□□□□ 0.68
SPIN3-232ENST00000639956 UBTFP17480 764 aaKnown RBP19.28■□□□□ 0.68
SPIN3-232ENST00000639956 CCDC88BA6NC98 1476 aa19.26■□□□□ 0.67
SPIN3-232ENST00000639956 RANGAP1P46060 587 aaPredicted RBP19.24■□□□□ 0.67
SPIN3-232ENST00000639956 BAZ1AQ9NRL2 1556 aaPredicted RBP19.21■□□□□ 0.67
SPIN3-232ENST00000639956 SOGA1O94964 1423 aa19.2■□□□□ 0.66
SPIN3-232ENST00000639956 RUSC2Q8N2Y8 1516 aa19.13■□□□□ 0.65
SPIN3-232ENST00000639956 SCAF1Q9H7N4 1312 aaKnown RBP19.11■□□□□ 0.65
SPIN3-232ENST00000639956 CSRNP3Q8WYN3 585 aa19.1■□□□□ 0.65
SPIN3-232ENST00000639956 CEP162Q5TB80 1403 aa19.07■□□□□ 0.64
SPIN3-232ENST00000639956 TOP2AP11388 1531 aaKnown RBP19.06■□□□□ 0.64
SPIN3-232ENST00000639956 SMARCA4P51532 1647 aa19.05■□□□□ 0.64
SPIN3-232ENST00000639956 EIF4G1Q04637 1599 aaKnown RBP19.03■□□□□ 0.64
SPIN3-232ENST00000639956 SMARCA2P51531 1590 aa19.03■□□□□ 0.64
SPIN3-232ENST00000639956 HNRNPUL2Q1KMD3 747 aaKnown RBP19.02■□□□□ 0.63
SPIN3-232ENST00000639956 DIEXFQ68CQ4 756 aaKnown RBP18.96■□□□□ 0.63
SPIN3-232ENST00000639956 UNC13AQ9UPW8 1703 aa18.91■□□□□ 0.62
SPIN3-232ENST00000639956 TNIKQ9UKE5 1360 aa18.9■□□□□ 0.62
SPIN3-232ENST00000639956 NEUROD1Q13562 356 aa18.9■□□□□ 0.62
SPIN3-232ENST00000639956 WRNQ14191 1432 aaPredicted RBP eCLIP18.87■□□□□ 0.61
SPIN3-232ENST00000639956 YTHDC1Q96MU7 727 aaKnown RBP18.85■□□□□ 0.61
SPIN3-232ENST00000639956 ACIN1Q9UKV3 1341 aaKnown RBP18.79■□□□□ 0.6
SPIN3-232ENST00000639956 APLP2Q06481 763 aa18.79■□□□□ 0.6
SPIN3-232ENST00000639956 GOLGA3Q08378 1498 aa18.77■□□□□ 0.6
SPIN3-232ENST00000639956 BICRAQ9NZM4 1560 aa18.75■□□□□ 0.59
SPIN3-232ENST00000639956 GTF3C3Q9Y5Q9 886 aa18.75■□□□□ 0.59
SPIN3-232ENST00000639956 EEA1Q15075 1411 aa18.71■□□□□ 0.59
SPIN3-232ENST00000639956 CLIP1P30622 1438 aa18.71■□□□□ 0.58
SPIN3-232ENST00000639956 SYNJ1O43426 1573 aa18.7■□□□□ 0.58
SPIN3-232ENST00000639956 ZNF316A6NFI3 1004 aaPredicted RBP18.69■□□□□ 0.58
SPIN3-232ENST00000639956 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
SPIN3-232ENST00000639956 RAPGEF2Q9Y4G8 1499 aa18.65■□□□□ 0.58
SPIN3-232ENST00000639956 CENPBP07199 599 aaPredicted RBP18.65■□□□□ 0.58
SPIN3-232ENST00000639956 ATAD2BQ9ULI0 1458 aa18.65■□□□□ 0.58
SPIN3-232ENST00000639956 CEP164Q9UPV0 1460 aa18.62■□□□□ 0.57
SPIN3-232ENST00000639956 ITGAEP38570 1179 aa18.6■□□□□ 0.57
SPIN3-232ENST00000639956 MIER1Q8N108 512 aa18.6■□□□□ 0.57
SPIN3-232ENST00000639956 KANK4Q5T7N3 995 aaPredicted RBP18.53■□□□□ 0.56
SPIN3-232ENST00000639956 VPS8Q8N3P4 1428 aa18.52■□□□□ 0.56
SPIN3-232ENST00000639956 PEG3Q9GZU2 1588 aa18.44■□□□□ 0.54
SPIN3-232ENST00000639956 PELP1Q8IZL8 1130 aaKnown RBP18.44■□□□□ 0.54
SPIN3-232ENST00000639956 KIF21BO75037 1637 aa18.42■□□□□ 0.54
SPIN3-232ENST00000639956 ATP1B4Q9UN42 357 aaPredicted RBP18.4■□□□□ 0.54
SPIN3-232ENST00000639956 P3H3Q8IVL6 736 aa18.36■□□□□ 0.53
SPIN3-232ENST00000639956 TOP2BQ02880 1626 aa18.3■□□□□ 0.52
SPIN3-232ENST00000639956 ARAP1Q96P48 1450 aa18.29■□□□□ 0.52
SPIN3-232ENST00000639956 DHX57Q6P158 1386 aaKnown RBP18.26■□□□□ 0.51
SPIN3-232ENST00000639956 CUX1P39880 1505 aa18.26■□□□□ 0.51
SPIN3-232ENST00000639956 PRXQ9BXM0 1461 aa18.24■□□□□ 0.51
SPIN3-232ENST00000639956 KIF27Q86VH2 1401 aa18.24■□□□□ 0.51
SPIN3-232ENST00000639956 FAM50AQ14320 339 aaKnown RBP18.21■□□□□ 0.5
SPIN3-232ENST00000639956 CUX2O14529 1486 aa18.16■□□□□ 0.5
SPIN3-232ENST00000639956 NCAPD3P42695 1498 aa18.15■□□□□ 0.5
SPIN3-232ENST00000639956 HIRIP3Q9BW71 556 aaPredicted RBP18.14■□□□□ 0.49
SPIN3-232ENST00000639956 CCNB3Q8WWL7 1395 aa18.13■□□□□ 0.49
SPIN3-232ENST00000639956 ARHGAP35Q9NRY4 1499 aa18.13■□□□□ 0.49
SPIN3-232ENST00000639956 BIVM-ERCC5R4GMW8 1640 aa18.12■□□□□ 0.49
SPIN3-232ENST00000639956 KCNH8Q96L42 1107 aa18.12■□□□□ 0.49
SPIN3-232ENST00000639956 SIN3AQ96ST3 1273 aa18.12■□□□□ 0.49
SPIN3-232ENST00000639956 ERICH3Q5RHP9 1530 aa18.09■□□□□ 0.49
SPIN3-232ENST00000639956 IGF1RP08069 1367 aa18.09■□□□□ 0.49
SPIN3-232ENST00000639956 CFTRP13569 1480 aa18.08■□□□□ 0.49
SPIN3-232ENST00000639956 CARMIL1Q5VZK9 1371 aa18.06■□□□□ 0.48
SPIN3-232ENST00000639956 RAB3GAP2Q9H2M9 1393 aa18.05■□□□□ 0.48
SPIN3-232ENST00000639956 RRBP1Q9P2E9 1410 aaKnown RBP18.02■□□□□ 0.48
SPIN3-232ENST00000639956 HMGXB3Q12766 1538 aa18.01■□□□□ 0.47
SPIN3-232ENST00000639956 DDX10Q13206 875 aaKnown RBP18.01■□□□□ 0.47
SPIN3-232ENST00000639956 CLSPNQ9HAW4 1339 aa18■□□□□ 0.47
SPIN3-232ENST00000639956 PHLDB1Q86UU1 1377 aa17.98■□□□□ 0.47
SPIN3-232ENST00000639956 CADPSQ9ULU8 1353 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms