RNA–Protein interactions for RNA: ENST00000638682.1

LINC02001-202, Transcript of long intergenic non-protein coding RNA 2001, humanhuman

TSL 5 BASIC

Gene LINC02001, Length 1,504 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02001-202ENST00000638682 RAPGEF6Q8TEU7 1601 aa17.32■□□□□ 0.36
LINC02001-202ENST00000638682 FMN1Q68DA7 1419 aa17.31■□□□□ 0.36
LINC02001-202ENST00000638682 PIP4P2Q8N4L2 257 aa17.31■□□□□ 0.36
LINC02001-202ENST00000638682 FYCO1Q9BQS8 1478 aa17.29■□□□□ 0.36
LINC02001-202ENST00000638682 CFAP43Q8NDM7 1665 aa17.28■□□□□ 0.36
LINC02001-202ENST00000638682 FAM69CQ0P6D2 419 aa17.28■□□□□ 0.36
LINC02001-202ENST00000638682 CASKIN1Q8WXD9 1431 aa17.27■□□□□ 0.36
LINC02001-202ENST00000638682 TIAM1Q13009 1591 aa17.27■□□□□ 0.35
LINC02001-202ENST00000638682 WDR7Q9Y4E6 1490 aa17.27■□□□□ 0.35
LINC02001-202ENST00000638682 PITPNM1O00562 1244 aa17.26■□□□□ 0.35
LINC02001-202ENST00000638682 MAP3K1Q13233 1512 aa17.26■□□□□ 0.35
LINC02001-202ENST00000638682 ARID3CA6NKF2 412 aa17.25■□□□□ 0.35
LINC02001-202ENST00000638682 SP7Q8TDD2 431 aaPredicted RBP17.25■□□□□ 0.35
LINC02001-202ENST00000638682 LRRIQ1Q96JM4 1722 aa17.24■□□□□ 0.35
LINC02001-202ENST00000638682 NUP153P49790 1475 aaKnown RBP17.24■□□□□ 0.35
LINC02001-202ENST00000638682 EPRSP07814 1512 aaKnown RBP17.23■□□□□ 0.35
LINC02001-202ENST00000638682 GLI2P10070 1586 aa17.22■□□□□ 0.35
LINC02001-202ENST00000638682 ATP10BO94823 1461 aa17.21■□□□□ 0.35
LINC02001-202ENST00000638682 ATP1B4Q9UN42 357 aaPredicted RBP17.2■□□□□ 0.34
LINC02001-202ENST00000638682 HECW1Q76N89 1606 aa17.19■□□□□ 0.34
LINC02001-202ENST00000638682 SPDYE2BA6NHP3 402 aa17.18■□□□□ 0.34
LINC02001-202ENST00000638682 SPDYE6P0CI01 402 aa17.18■□□□□ 0.34
LINC02001-202ENST00000638682 FXR2P51116 673 aaKnown RBP eCLIP17.18■□□□□ 0.34
LINC02001-202ENST00000638682 SPDYE2Q495Y8 402 aa17.18■□□□□ 0.34
LINC02001-202ENST00000638682 KANK4Q5T7N3 995 aaPredicted RBP17.18■□□□□ 0.34
LINC02001-202ENST00000638682 TSPOAP1O95153 1857 aa17.18■□□□□ 0.34
LINC02001-202ENST00000638682 MAP3K4Q9Y6R4 1608 aa17.17■□□□□ 0.34
LINC02001-202ENST00000638682 LRRC9Q6ZRR7 1453 aa17.15■□□□□ 0.34
LINC02001-202ENST00000638682 CDK13Q14004 1512 aaKnown RBP17.14■□□□□ 0.33
LINC02001-202ENST00000638682 PPRC1Q5VV67 1664 aaKnown RBP17.13■□□□□ 0.33
LINC02001-202ENST00000638682 CCDC18Q5T9S5 1454 aa17.12■□□□□ 0.33
LINC02001-202ENST00000638682 KCNH8Q96L42 1107 aa17.11■□□□□ 0.33
LINC02001-202ENST00000638682 TEX14Q8IWB6 1497 aa17.11■□□□□ 0.33
LINC02001-202ENST00000638682 HAX1O00165 279 aa17.1■□□□□ 0.33
LINC02001-202ENST00000638682 KDM6BO15054 1643 aa17.1■□□□□ 0.33
LINC02001-202ENST00000638682 ABCA9Q8IUA7 1624 aa17.08■□□□□ 0.32
LINC02001-202ENST00000638682 CD109Q6YHK3 1445 aa17.07■□□□□ 0.32
LINC02001-202ENST00000638682 PLEKHD1A6NEE1 506 aa17.05■□□□□ 0.32
LINC02001-202ENST00000638682 MAGI3Q5TCQ9 1506 aa17.04■□□□□ 0.32
LINC02001-202ENST00000638682 EHBP1L1Q8N3D4 1523 aa17.04■□□□□ 0.32
LINC02001-202ENST00000638682 MTUS2Q5JR59 1369 aa17.03■□□□□ 0.32
LINC02001-202ENST00000638682 SUPT6HQ7KZ85 1726 aaKnown RBP17.03■□□□□ 0.32
LINC02001-202ENST00000638682 TTC37Q6PGP7 1564 aa17■□□□□ 0.31
LINC02001-202ENST00000638682 KIF14Q15058 1648 aa17■□□□□ 0.31
LINC02001-202ENST00000638682 RRBP1Q9P2E9 1410 aaKnown RBP17■□□□□ 0.31
LINC02001-202ENST00000638682 CDK11AQ9UQ88 783 aaPredicted RBP16.99■□□□□ 0.31
LINC02001-202ENST00000638682 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.99■□□□□ 0.314e-6■■■□□ 15.9
LINC02001-202ENST00000638682 TROQ12816 1431 aaPredicted RBP16.97■□□□□ 0.31
LINC02001-202ENST00000638682 PHLDB1Q86UU1 1377 aa16.97■□□□□ 0.31
LINC02001-202ENST00000638682 MKRN4PQ13434 485 aaPredicted RBP16.96■□□□□ 0.31
LINC02001-202ENST00000638682 SPDYE1Q8NFV5 336 aaPredicted RBP16.96■□□□□ 0.3
LINC02001-202ENST00000638682 NCOA2Q15596 1464 aa16.95■□□□□ 0.3
LINC02001-202ENST00000638682 CCNB3Q8WWL7 1395 aa16.95■□□□□ 0.3
LINC02001-202ENST00000638682 CFAP74Q9C0B2 1584 aa16.94■□□□□ 0.3
LINC02001-202ENST00000638682 ZNF692Q9BU19 519 aaPredicted RBP16.93■□□□□ 0.3
LINC02001-202ENST00000638682 NEO1Q92859 1461 aa16.93■□□□□ 0.3
LINC02001-202ENST00000638682 COL17A1Q9UMD9 1497 aaPredicted RBP16.93■□□□□ 0.3
LINC02001-202ENST00000638682 CLEC11AQ9Y240 323 aa16.91■□□□□ 0.3
LINC02001-202ENST00000638682 FANCAO15360 1455 aa16.9■□□□□ 0.3
LINC02001-202ENST00000638682 MYO5CQ9NQX4 1742 aa16.9■□□□□ 0.3
LINC02001-202ENST00000638682 SSUH2Q9Y2M2 353 aa16.89■□□□□ 0.29
LINC02001-202ENST00000638682 ARAP3Q8WWN8 1544 aa16.89■□□□□ 0.29
LINC02001-202ENST00000638682 MYOM3Q5VTT5 1437 aa16.88■□□□□ 0.29
LINC02001-202ENST00000638682 FGD6Q6ZV73 1430 aa16.87■□□□□ 0.29
LINC02001-202ENST00000638682 PLCH2O75038 1416 aa16.85■□□□□ 0.29
LINC02001-202ENST00000638682 ARHGAP5Q13017 1502 aa16.85■□□□□ 0.29
LINC02001-202ENST00000638682 PREX2Q70Z35 1606 aa16.84■□□□□ 0.29
LINC02001-202ENST00000638682 PTPN23Q9H3S7 1636 aa16.84■□□□□ 0.29
LINC02001-202ENST00000638682 AKNAQ7Z591 1439 aa16.84■□□□□ 0.29
LINC02001-202ENST00000638682 PRKAR2AP13861 404 aaKnown RBP16.84■□□□□ 0.29
LINC02001-202ENST00000638682 FRMPD1Q5SYB0 1578 aa16.83■□□□□ 0.28
LINC02001-202ENST00000638682 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.82■□□□□ 0.28
LINC02001-202ENST00000638682 FAM50AQ14320 339 aaKnown RBP16.82■□□□□ 0.28
LINC02001-202ENST00000638682 ITSN2Q9NZM3 1697 aa16.82■□□□□ 0.28
LINC02001-202ENST00000638682 ADGRL1O94910 1474 aa16.82■□□□□ 0.28
LINC02001-202ENST00000638682 HRCP23327 699 aa16.81■□□□□ 0.28
LINC02001-202ENST00000638682 DENND4BO75064 1496 aaPredicted RBP16.81■□□□□ 0.28
LINC02001-202ENST00000638682 ITGAEP38570 1179 aa16.79■□□□□ 0.28
LINC02001-202ENST00000638682 CDC42BPAQ5VT25 1732 aa16.78■□□□□ 0.28
LINC02001-202ENST00000638682 RICTORQ6R327 1708 aa16.78■□□□□ 0.28
LINC02001-202ENST00000638682 EFCAB2Q5VUJ9 269 aa16.78■□□□□ 0.28
LINC02001-202ENST00000638682 CDC42BPBQ9Y5S2 1711 aa16.78■□□□□ 0.28
LINC02001-202ENST00000638682 TCOF1Q13428 1488 aaKnown RBP16.77■□□□□ 0.28
LINC02001-202ENST00000638682 RAPGEF3O95398 923 aa16.77■□□□□ 0.28
LINC02001-202ENST00000638682 POGZQ7Z3K3 1410 aa16.77■□□□□ 0.28
LINC02001-202ENST00000638682 MIA2Q96PC5 1412 aa16.77■□□□□ 0.28
LINC02001-202ENST00000638682 EVX2Q03828 476 aa16.76■□□□□ 0.27
LINC02001-202ENST00000638682 SCAPERQ9BY12 1400 aa16.76■□□□□ 0.27
LINC02001-202ENST00000638682 ZMYM4Q5VZL5 1548 aa16.76■□□□□ 0.27
LINC02001-202ENST00000638682 ARHGEF40Q8TER5 1519 aa16.76■□□□□ 0.27
LINC02001-202ENST00000638682 ABCC1P33527 1531 aa16.74■□□□□ 0.27
LINC02001-202ENST00000638682 GPATCH8Q9UKJ3 1502 aaKnown RBP16.73■□□□□ 0.27
LINC02001-202ENST00000638682 ZNF518AQ6AHZ1 1483 aa16.72■□□□□ 0.27
LINC02001-202ENST00000638682 ZFYVE16Q7Z3T8 1539 aa16.71■□□□□ 0.26
LINC02001-202ENST00000638682 CCER1Q8TC90 406 aaPredicted RBP16.7■□□□□ 0.26
LINC02001-202ENST00000638682 SAMD9LQ8IVG5 1584 aa16.7■□□□□ 0.26
LINC02001-202ENST00000638682 SYCP2Q9BX26 1530 aa16.69■□□□□ 0.26
LINC02001-202ENST00000638682 KDM5CP41229 1560 aa16.68■□□□□ 0.26
LINC02001-202ENST00000638682 MAGI2Q86UL8 1455 aa16.68■□□□□ 0.26
LINC02001-202ENST00000638682 CFDP1Q9UEE9 299 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms