RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 CDC42BPBQ9Y5S2 1711 aa31.57■■■□□ 2.65
CLN8-213ENST00000637156 PREX2Q70Z35 1606 aa31.56■■■□□ 2.64
CLN8-213ENST00000637156 ABCC5O15440 1437 aa31.55■■■□□ 2.64
CLN8-213ENST00000637156 CHIC2Q9UKJ5 165 aa31.55■■■□□ 2.64
CLN8-213ENST00000637156 MAPKBP1O60336 1514 aa31.53■■■□□ 2.64
CLN8-213ENST00000637156 DAPK1P53355 1430 aa31.53■■■□□ 2.64
CLN8-213ENST00000637156 HNRNPMP52272 730 aaKnown RBP eCLIP31.52■■■□□ 2.646e-8■□□□□ 11
CLN8-213ENST00000637156 ARHGAP5Q13017 1502 aa31.52■■■□□ 2.64
CLN8-213ENST00000637156 EFCAB2Q5VUJ9 269 aa31.52■■■□□ 2.64
CLN8-213ENST00000637156 ABCA9Q8IUA7 1624 aa31.5■■■□□ 2.63
CLN8-213ENST00000637156 MYO5CQ9NQX4 1742 aa31.5■■■□□ 2.63
CLN8-213ENST00000637156 SETD5Q9C0A6 1442 aa31.49■■■□□ 2.63
CLN8-213ENST00000637156 DNMT1P26358 1616 aaKnown RBP31.47■■■□□ 2.63
CLN8-213ENST00000637156 SAMD9LQ8IVG5 1584 aa31.47■■■□□ 2.63
CLN8-213ENST00000637156 MBD5Q9P267 1494 aa31.46■■■□□ 2.63
CLN8-213ENST00000637156 RAB3GAP2Q9H2M9 1393 aa31.46■■■□□ 2.63
CLN8-213ENST00000637156 RRP7BPQ9NSQ0 103 aa31.45■■■□□ 2.63
CLN8-213ENST00000637156 CCER1Q8TC90 406 aaPredicted RBP31.44■■■□□ 2.62
CLN8-213ENST00000637156 ARAP3Q8WWN8 1544 aa31.42■■■□□ 2.62
CLN8-213ENST00000637156 HFM1A2PYH4 1435 aa31.42■■■□□ 2.62
CLN8-213ENST00000637156 RSPH4AQ5TD94 716 aa31.42■■■□□ 2.62
CLN8-213ENST00000637156 CD109Q6YHK3 1445 aa31.41■■■□□ 2.62
CLN8-213ENST00000637156 KIAA1107Q9UPP5 1409 aa31.41■■■□□ 2.62
CLN8-213ENST00000637156 NAIPQ13075 1403 aa31.4■■■□□ 2.62
CLN8-213ENST00000637156 AKNAQ7Z591 1439 aa31.4■■■□□ 2.62
CLN8-213ENST00000637156 HRCP23327 699 aa31.4■■■□□ 2.62
CLN8-213ENST00000637156 TSPY4P0CV99 314 aa31.38■■■□□ 2.61
CLN8-213ENST00000637156 TSPY10P0CW01 314 aa31.38■■■□□ 2.61
CLN8-213ENST00000637156 DNAJC5Q9H3Z4 198 aa31.38■■■□□ 2.61
CLN8-213ENST00000637156 ROCK1Q13464 1354 aa31.38■■■□□ 2.61
CLN8-213ENST00000637156 ARHGEF12Q9NZN5 1544 aa31.37■■■□□ 2.61
CLN8-213ENST00000637156 FANCAO15360 1455 aa31.36■■■□□ 2.61
CLN8-213ENST00000637156 PLEKHH2Q8IVE3 1493 aa31.36■■■□□ 2.61
CLN8-213ENST00000637156 ARHGEF5Q12774 1597 aa31.34■■■□□ 2.61
CLN8-213ENST00000637156 SYCP2Q9BX26 1530 aa31.34■■■□□ 2.61
CLN8-213ENST00000637156 FAM69CQ0P6D2 419 aa31.33■■■□□ 2.61
CLN8-213ENST00000637156 NCOA1Q15788 1441 aa31.32■■■□□ 2.6
CLN8-213ENST00000637156 CCDC141Q6ZP82 1450 aa31.3■■■□□ 2.6
CLN8-213ENST00000637156 C9orf84Q5VXU9 1444 aa31.28■■■□□ 2.6
CLN8-213ENST00000637156 GLI2P10070 1586 aa31.27■■■□□ 2.6
CLN8-213ENST00000637156 SHANK2Q9UPX8 1470 aa31.27■■■□□ 2.6
CLN8-213ENST00000637156 ABCC1P33527 1531 aa31.27■■■□□ 2.6
CLN8-213ENST00000637156 ADGRL2O95490 1459 aa31.26■■■□□ 2.6
CLN8-213ENST00000637156 DHX57Q6P158 1386 aaKnown RBP31.26■■■□□ 2.6
CLN8-213ENST00000637156 AFAP1Q8N556 730 aa31.26■■■□□ 2.59
CLN8-213ENST00000637156 ANKRD30AQ9BXX3 1397 aa31.26■■■□□ 2.59
CLN8-213ENST00000637156 TRAPPC8Q9Y2L5 1435 aa31.25■■■□□ 2.59
CLN8-213ENST00000637156 CROCC2H7BZ55 1655 aa31.25■■■□□ 2.59
CLN8-213ENST00000637156 SCAPERQ9BY12 1400 aa31.22■■■□□ 2.59
CLN8-213ENST00000637156 DIP2BQ9P265 1576 aa31.22■■■□□ 2.59
CLN8-213ENST00000637156 ADGRL1O94910 1474 aa31.21■■■□□ 2.59
CLN8-213ENST00000637156 MAP3K4Q9Y6R4 1608 aa31.19■■■□□ 2.58
CLN8-213ENST00000637156 GCC2Q8IWJ2 1684 aa31.17■■■□□ 2.58
CLN8-213ENST00000637156 KDM6BO15054 1643 aa31.16■■■□□ 2.58
CLN8-213ENST00000637156 ADGBQ8N7X0 1667 aa31.14■■■□□ 2.58
CLN8-213ENST00000637156 ZEB1P37275 1124 aaPredicted RBP31.14■■■□□ 2.58
CLN8-213ENST00000637156 MAST1Q9Y2H9 1570 aa31.12■■■□□ 2.57
CLN8-213ENST00000637156 NEO1Q92859 1461 aa31.12■■■□□ 2.57
CLN8-213ENST00000637156 KIF15Q9NS87 1388 aa31.12■■■□□ 2.57
CLN8-213ENST00000637156 SPAG9O60271 1321 aaKnown RBP31.11■■■□□ 2.57
CLN8-213ENST00000637156 ANKRD50Q9ULJ7 1429 aa31.09■■■□□ 2.57
CLN8-213ENST00000637156 TRIM52Q96A61 297 aa31.08■■■□□ 2.57
CLN8-213ENST00000637156 CFAP74Q9C0B2 1584 aa31.07■■■□□ 2.56
CLN8-213ENST00000637156 RTEL1-TNFRSF6BF6WH68 1400 aa31.06■■■□□ 2.56
CLN8-213ENST00000637156 CLSPNQ9HAW4 1339 aa31.05■■■□□ 2.56
CLN8-213ENST00000637156 RAPGEF3O95398 923 aa31.03■■■□□ 2.56
CLN8-213ENST00000637156 ACIN1Q9UKV3 1341 aaKnown RBP31.02■■■□□ 2.56
CLN8-213ENST00000637156 ZNF518AQ6AHZ1 1483 aa31.01■■■□□ 2.56
CLN8-213ENST00000637156 KIF13AQ9H1H9 1805 aa31■■■□□ 2.55
CLN8-213ENST00000637156 POGZQ7Z3K3 1410 aa31■■■□□ 2.55
CLN8-213ENST00000637156 PLXNC1O60486 1568 aa30.98■■■□□ 2.55
CLN8-213ENST00000637156 DENND4BO75064 1496 aaPredicted RBP30.98■■■□□ 2.55
CLN8-213ENST00000637156 MYT1LQ9UL68 1186 aa30.97■■■□□ 2.55
CLN8-213ENST00000637156 ZFYVE16Q7Z3T8 1539 aa30.97■■■□□ 2.55
CLN8-213ENST00000637156 MPHOSPH9Q99550 1183 aa30.97■■■□□ 2.55
CLN8-213ENST00000637156 PPRC1Q5VV67 1664 aaKnown RBP30.96■■■□□ 2.55
CLN8-213ENST00000637156 TSPOAP1O95153 1857 aa30.95■■■□□ 2.55
CLN8-213ENST00000637156 TEX14Q8IWB6 1497 aa30.94■■■□□ 2.54
CLN8-213ENST00000637156 ATP7AQ04656 1500 aa30.93■■■□□ 2.54
CLN8-213ENST00000637156 DUOX2Q9NRD8 1548 aa30.92■■■□□ 2.54
CLN8-213ENST00000637156 KDM5CP41229 1560 aa30.91■■■□□ 2.54
CLN8-213ENST00000637156 INO80Q9ULG1 1556 aaPredicted RBP30.91■■■□□ 2.54
CLN8-213ENST00000637156 MLH3Q9UHC1 1453 aa30.89■■■□□ 2.54
CLN8-213ENST00000637156 SLC4A1APQ9BWU0 796 aaKnown RBP30.87■■■□□ 2.53
CLN8-213ENST00000637156 NUP155O75694 1391 aa30.87■■■□□ 2.53
CLN8-213ENST00000637156 ERBINQ96RT1 1412 aa30.86■■■□□ 2.53
CLN8-213ENST00000637156 KIDINS220Q9ULH0 1771 aa30.86■■■□□ 2.53
CLN8-213ENST00000637156 TRHP20396 242 aaPredicted RBP30.84■■■□□ 2.53
CLN8-213ENST00000637156 DHX29Q7Z478 1369 aaKnown RBP30.84■■■□□ 2.53
CLN8-213ENST00000637156 SIN3AQ96ST3 1273 aa30.84■■■□□ 2.53
CLN8-213ENST00000637156 PZPP20742 1482 aa30.83■■■□□ 2.53
CLN8-213ENST00000637156 FOXD1Q16676 465 aa30.81■■■□□ 2.52
CLN8-213ENST00000637156 RICTORQ6R327 1708 aa30.8■■■□□ 2.52
CLN8-213ENST00000637156 COL17A1Q9UMD9 1497 aaPredicted RBP30.79■■■□□ 2.52
CLN8-213ENST00000637156 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.78■■■□□ 2.52
CLN8-213ENST00000637156 HECW2Q9P2P5 1572 aa30.78■■■□□ 2.52
CLN8-213ENST00000637156 FRMPD1Q5SYB0 1578 aa30.76■■■□□ 2.51
CLN8-213ENST00000637156 NEUROD1Q13562 356 aa30.76■■■□□ 2.51
CLN8-213ENST00000637156 KIF3BO15066 747 aa30.74■■■□□ 2.51
CLN8-213ENST00000637156 PKD2Q13563 968 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms