RNA–Protein interactions for RNA: ENST00000622829.4

GTF2IP1-210, Transcript of general transcription factor IIi pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IP1, Length 3,605 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP1-210ENST00000622829 NCAPD3P42695 1498 aa24.18■■□□□ 1.46
GTF2IP1-210ENST00000622829 CRBNQ96SW2 442 aa24.17■■□□□ 1.46
GTF2IP1-210ENST00000622829 GZF1Q9H116 711 aaPredicted RBP24.17■■□□□ 1.46
GTF2IP1-210ENST00000622829 RRP1P56182 461 aaKnown RBP24.16■■□□□ 1.46
GTF2IP1-210ENST00000622829 FMN1Q68DA7 1419 aa24.15■■□□□ 1.46
GTF2IP1-210ENST00000622829 CNTLNQ9NXG0 1405 aa24.12■■□□□ 1.45
GTF2IP1-210ENST00000622829 TCERG1O14776 1098 aaKnown RBP24.11■■□□□ 1.45
GTF2IP1-210ENST00000622829 WDR43Q15061 677 aaKnown RBP eCLIP24.1■■□□□ 1.45
GTF2IP1-210ENST00000622829 CFDP1Q9UEE9 299 aaPredicted RBP24.1■■□□□ 1.45
GTF2IP1-210ENST00000622829 FGD6Q6ZV73 1430 aa24.09■■□□□ 1.45
GTF2IP1-210ENST00000622829 TNNT2P45379 298 aaPredicted RBP24.09■■□□□ 1.45
GTF2IP1-210ENST00000622829 FRAT1Q92837 279 aaPredicted RBP24.09■■□□□ 1.45
GTF2IP1-210ENST00000622829 DNAJC5BQ9UF47 199 aa24.09■■□□□ 1.45
GTF2IP1-210ENST00000622829 CC2D2AQ9P2K1 1620 aa24.08■■□□□ 1.45
GTF2IP1-210ENST00000622829 NFKBIBQ15653 356 aa24.07■■□□□ 1.44
GTF2IP1-210ENST00000622829 DDRGK1Q96HY6 314 aa24.07■■□□□ 1.44
GTF2IP1-210ENST00000622829 GSE1Q14687 1217 aa24.07■■□□□ 1.44
GTF2IP1-210ENST00000622829 AQRO60306 1485 aaKnown RBP eCLIP24.06■■□□□ 1.44
GTF2IP1-210ENST00000622829 CCDC146Q8IYE0 955 aa24.05■■□□□ 1.44
GTF2IP1-210ENST00000622829 UACAQ9BZF9 1416 aa24.05■■□□□ 1.44
GTF2IP1-210ENST00000622829 FRAT2O75474 233 aaPredicted RBP24.04■■□□□ 1.44
GTF2IP1-210ENST00000622829 PTPRKQ15262 1439 aa24.03■■□□□ 1.44
GTF2IP1-210ENST00000622829 NAP1L5Q96NT1 182 aaPredicted RBP24.01■■□□□ 1.43
GTF2IP1-210ENST00000622829 HMGXB3Q12766 1538 aa24■■□□□ 1.43
GTF2IP1-210ENST00000622829 C20orf194Q5TEA3 1177 aa23.99■■□□□ 1.43
GTF2IP1-210ENST00000622829 PNISRQ8TF01 805 aaKnown RBP23.99■■□□□ 1.43
GTF2IP1-210ENST00000622829 RAD54L2Q9Y4B4 1467 aa23.99■■□□□ 1.43
GTF2IP1-210ENST00000622829 CUX1P39880 1505 aa23.99■■□□□ 1.43
GTF2IP1-210ENST00000622829 USP47Q96K76 1375 aa23.98■■□□□ 1.43
GTF2IP1-210ENST00000622829 TIAM1Q13009 1591 aa23.97■■□□□ 1.43
GTF2IP1-210ENST00000622829 BACH2Q9BYV9 841 aa23.96■■□□□ 1.43
GTF2IP1-210ENST00000622829 CFTRP13569 1480 aa23.95■■□□□ 1.43
GTF2IP1-210ENST00000622829 TSPY4P0CV99 314 aa23.93■■□□□ 1.42
GTF2IP1-210ENST00000622829 TSPY10P0CW01 314 aa23.93■■□□□ 1.42
GTF2IP1-210ENST00000622829 NAIPQ13075 1403 aa23.92■■□□□ 1.42
GTF2IP1-210ENST00000622829 ERICH3Q5RHP9 1530 aa23.91■■□□□ 1.42
GTF2IP1-210ENST00000622829 CLUAP1Q96AJ1 413 aa23.9■■□□□ 1.42
GTF2IP1-210ENST00000622829 BCL2L13Q9BXK5 485 aa23.9■■□□□ 1.42
GTF2IP1-210ENST00000622829 TOP2BQ02880 1626 aa23.9■■□□□ 1.42
GTF2IP1-210ENST00000622829 ARID3AQ99856 593 aa23.89■■□□□ 1.42
GTF2IP1-210ENST00000622829 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.87■■□□□ 1.41
GTF2IP1-210ENST00000622829 FGD5Q6ZNL6 1462 aa23.86■■□□□ 1.41
GTF2IP1-210ENST00000622829 PANK3Q9H999 370 aa23.85■■□□□ 1.41
GTF2IP1-210ENST00000622829 CHGAP10645 457 aaKnown RBP23.85■■□□□ 1.41
GTF2IP1-210ENST00000622829 KNSTRNQ9Y448 316 aa23.85■■□□□ 1.41
GTF2IP1-210ENST00000622829 ZBTB7CA1YPR0 619 aa23.85■■□□□ 1.41
GTF2IP1-210ENST00000622829 NLRP13Q86W25 1043 aa23.85■■□□□ 1.41
GTF2IP1-210ENST00000622829 UPF2Q9HAU5 1272 aaKnown RBP23.84■■□□□ 1.41
GTF2IP1-210ENST00000622829 NUP155O75694 1391 aa23.84■■□□□ 1.41
GTF2IP1-210ENST00000622829 HSP90AA1P07900 732 aaKnown RBP23.84■■□□□ 1.41
GTF2IP1-210ENST00000622829 NCOA2Q15596 1464 aa23.83■■□□□ 1.41
GTF2IP1-210ENST00000622829 MYBBP1AQ9BQG0 1328 aaKnown RBP23.82■■□□□ 1.4
GTF2IP1-210ENST00000622829 HFM1A2PYH4 1435 aa23.81■■□□□ 1.4
GTF2IP1-210ENST00000622829 RRP7AQ9Y3A4 280 aaKnown RBP23.81■■□□□ 1.4
GTF2IP1-210ENST00000622829 ROCK2O75116 1388 aaKnown RBP23.81■■□□□ 1.4
GTF2IP1-210ENST00000622829 NBPF1Q3BBV0 1214 aa23.8■■□□□ 1.4
GTF2IP1-210ENST00000622829 KTN1Q86UP2 1357 aaKnown RBP23.8■■□□□ 1.4
GTF2IP1-210ENST00000622829 MYOM3Q5VTT5 1437 aa23.79■■□□□ 1.4
GTF2IP1-210ENST00000622829 SMG6Q86US8 1419 aaKnown RBP23.79■■□□□ 1.4
GTF2IP1-210ENST00000622829 USP35Q9P2H5 1018 aa23.79■■□□□ 1.4
GTF2IP1-210ENST00000622829 TPRNQ4KMQ1 711 aa23.79■■□□□ 1.4
GTF2IP1-210ENST00000622829 ADAMTS8Q9UP79 889 aa23.78■■□□□ 1.4
GTF2IP1-210ENST00000622829 CADPSQ9ULU8 1353 aa23.78■■□□□ 1.4
GTF2IP1-210ENST00000622829 FOXD4L1Q9NU39 408 aa23.77■■□□□ 1.4
GTF2IP1-210ENST00000622829 HNRNPMP52272 730 aaKnown RBP eCLIP23.76■■□□□ 1.39
GTF2IP1-210ENST00000622829 COG6Q9Y2V7 657 aa23.76■■□□□ 1.39
GTF2IP1-210ENST00000622829 RALBP1Q15311 655 aa23.76■■□□□ 1.39
GTF2IP1-210ENST00000622829 PCF11O94913 1555 aaKnown RBP23.75■■□□□ 1.39
GTF2IP1-210ENST00000622829 POGKQ9P215 609 aa23.75■■□□□ 1.39
GTF2IP1-210ENST00000622829 NESP48681 1621 aa23.75■■□□□ 1.39
GTF2IP1-210ENST00000622829 FAM161AQ3B820 660 aa23.74■■□□□ 1.39
GTF2IP1-210ENST00000622829 BECN1Q14457 450 aa23.73■■□□□ 1.39
GTF2IP1-210ENST00000622829 KIF15Q9NS87 1388 aa23.71■■□□□ 1.39
GTF2IP1-210ENST00000622829 APAF1O14727 1248 aa23.71■■□□□ 1.39
GTF2IP1-210ENST00000622829 BCAR3O75815 825 aa23.71■■□□□ 1.39
GTF2IP1-210ENST00000622829 VSIG10Q8N0Z9 540 aa23.71■■□□□ 1.39
GTF2IP1-210ENST00000622829 NCOA1Q15788 1441 aa23.69■■□□□ 1.38
GTF2IP1-210ENST00000622829 CASKIN1Q8WXD9 1431 aa23.68■■□□□ 1.38
GTF2IP1-210ENST00000622829 PANK1Q8TE04 598 aa23.68■■□□□ 1.38
GTF2IP1-210ENST00000622829 MS4A1P11836 297 aa23.67■■□□□ 1.38
GTF2IP1-210ENST00000622829 GOLGA2Q08379 1002 aa23.67■■□□□ 1.38
GTF2IP1-210ENST00000622829 MFAP1P55081 439 aaKnown RBP23.66■■□□□ 1.38
GTF2IP1-210ENST00000622829 PLEKHD1A6NEE1 506 aa23.65■■□□□ 1.38
GTF2IP1-210ENST00000622829 NCLP19338 710 aaKnown RBP23.64■■□□□ 1.38
GTF2IP1-210ENST00000622829 CHMP7Q8WUX9 453 aaPredicted RBP23.63■■□□□ 1.37
GTF2IP1-210ENST00000622829 TMF1P82094 1093 aa23.62■■□□□ 1.37
GTF2IP1-210ENST00000622829 PNNQ9H307 717 aaKnown RBP23.62■■□□□ 1.37
GTF2IP1-210ENST00000622829 CENPQQ7L2Z9 268 aaPredicted RBP23.61■■□□□ 1.37
GTF2IP1-210ENST00000622829 TRIM44Q96DX7 344 aaPredicted RBP23.61■■□□□ 1.37
GTF2IP1-210ENST00000622829 GLIPR1L2Q4G1C9 344 aa23.59■■□□□ 1.37
GTF2IP1-210ENST00000622829 PDE3BQ13370 1112 aa23.58■■□□□ 1.37
GTF2IP1-210ENST00000622829 ANKRD30BQ9BXX2 1392 aa23.56■■□□□ 1.36
GTF2IP1-210ENST00000622829 PDS5BQ9NTI5 1447 aa23.56■■□□□ 1.36
GTF2IP1-210ENST00000622829 SAFB2Q14151 953 aaKnown RBP eCLIP23.55■■□□□ 1.36
GTF2IP1-210ENST00000622829 FTSJ3Q8IY81 847 aaKnown RBP23.54■■□□□ 1.36
GTF2IP1-210ENST00000622829 FANCD2Q9BXW9 1451 aa23.54■■□□□ 1.36
GTF2IP1-210ENST00000622829 FYCO1Q9BQS8 1478 aa23.53■■□□□ 1.36
GTF2IP1-210ENST00000622829 PTPN23Q9H3S7 1636 aa23.52■■□□□ 1.36
GTF2IP1-210ENST00000622829 GOLGA6L3A6NEY3 463 aa23.51■■□□□ 1.35
GTF2IP1-210ENST00000622829 SEC24BO95487 1268 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms