RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 TRIM44Q96DX7 344 aaPredicted RBP20.86■□□□□ 0.93
GABRB3-215ENST00000622697 SPRYD3Q8NCJ5 442 aa20.85■□□□□ 0.93
GABRB3-215ENST00000622697 GGT6Q6P531 493 aa20.84■□□□□ 0.93
GABRB3-215ENST00000622697 SRPK2P78362 688 aaKnown RBP20.84■□□□□ 0.93
GABRB3-215ENST00000622697 A0A0G2JS52 829 aa20.83■□□□□ 0.93
GABRB3-215ENST00000622697 PDS5BQ9NTI5 1447 aa20.83■□□□□ 0.92
GABRB3-215ENST00000622697 GOLGA6L22H0YM25 854 aa20.83■□□□□ 0.92
GABRB3-215ENST00000622697 STK26Q9P289 416 aa20.82■□□□□ 0.92
GABRB3-215ENST00000622697 ANKRD30AQ9BXX3 1397 aa20.82■□□□□ 0.92
GABRB3-215ENST00000622697 SOX12O15370 315 aa20.81■□□□□ 0.92
GABRB3-215ENST00000622697 KANK1Q14678 1352 aa20.81■□□□□ 0.92
GABRB3-215ENST00000622697 RALBP1Q15311 655 aa20.81■□□□□ 0.92
GABRB3-215ENST00000622697 MLECQ14165 292 aa20.78■□□□□ 0.92
GABRB3-215ENST00000622697 CARMIL2Q6F5E8 1435 aa20.78■□□□□ 0.92
GABRB3-215ENST00000622697 ERICH6BQ5W0A0 696 aa20.78■□□□□ 0.92
GABRB3-215ENST00000622697 GLIPR1L2Q4G1C9 344 aa20.76■□□□□ 0.91
GABRB3-215ENST00000622697 CCDC146Q8IYE0 955 aa20.76■□□□□ 0.91
GABRB3-215ENST00000622697 ST20-MTHFSA0A0A6YYL1 179 aa20.75■□□□□ 0.91
GABRB3-215ENST00000622697 CASC1Q6TDU7 716 aa20.75■□□□□ 0.91
GABRB3-215ENST00000622697 HSP90AB1P08238 724 aaKnown RBP20.74■□□□□ 0.91
GABRB3-215ENST00000622697 LMOD2Q6P5Q4 547 aa20.72■□□□□ 0.91
GABRB3-215ENST00000622697 PRKRIP1Q9H875 184 aaPredicted RBP20.72■□□□□ 0.91
GABRB3-215ENST00000622697 U2AF1L5P0DN76 240 aaPredicted RBP20.71■□□□□ 0.91
GABRB3-215ENST00000622697 U2AF1Q01081 240 aaKnown RBP eCLIP20.71■□□□□ 0.91
GABRB3-215ENST00000622697 CCDC18Q5T9S5 1454 aa20.7■□□□□ 0.91
GABRB3-215ENST00000622697 IGF1RP08069 1367 aa20.7■□□□□ 0.9
GABRB3-215ENST00000622697 NUTM2DQ5VT03 806 aaPredicted RBP20.7■□□□□ 0.9
GABRB3-215ENST00000622697 KIF21BO75037 1637 aa20.69■□□□□ 0.9
GABRB3-215ENST00000622697 MS4A1P11836 297 aa20.69■□□□□ 0.9
GABRB3-215ENST00000622697 NLRP13Q86W25 1043 aa20.68■□□□□ 0.9
GABRB3-215ENST00000622697 TCERG1O14776 1098 aaKnown RBP20.68■□□□□ 0.9
GABRB3-215ENST00000622697 KIF3BO15066 747 aa20.67■□□□□ 0.9
GABRB3-215ENST00000622697 EFCAB2Q5VUJ9 269 aa20.67■□□□□ 0.9
GABRB3-215ENST00000622697 PTMAP06454 111 aaKnown RBP20.66■□□□□ 0.9
GABRB3-215ENST00000622697 FANCD2Q9BXW9 1451 aa20.66■□□□□ 0.9
GABRB3-215ENST00000622697 APBB1O00213 710 aa20.66■□□□□ 0.9
GABRB3-215ENST00000622697 PLIN1O60240 522 aa20.66■□□□□ 0.9
GABRB3-215ENST00000622697 PHLDB1Q86UU1 1377 aa20.66■□□□□ 0.9
GABRB3-215ENST00000622697 SLKQ9H2G2 1235 aaPredicted RBP20.66■□□□□ 0.9
GABRB3-215ENST00000622697 JPH4Q96JJ6 628 aa20.65■□□□□ 0.9
GABRB3-215ENST00000622697 CLUAP1Q96AJ1 413 aa20.65■□□□□ 0.9
GABRB3-215ENST00000622697 HSCBQ8IWL3 235 aa20.64■□□□□ 0.89
GABRB3-215ENST00000622697 NAP1L5Q96NT1 182 aaPredicted RBP20.64■□□□□ 0.89
GABRB3-215ENST00000622697 PNNQ9H307 717 aaKnown RBP20.63■□□□□ 0.89
GABRB3-215ENST00000622697 PANK3Q9H999 370 aa20.63■□□□□ 0.89
GABRB3-215ENST00000622697 GOLGA2Q08379 1002 aa20.63■□□□□ 0.89
GABRB3-215ENST00000622697 IPO9Q96P70 1041 aaKnown RBP20.63■□□□□ 0.89
GABRB3-215ENST00000622697 ITPRIPQ8IWB1 547 aa20.62■□□□□ 0.89
GABRB3-215ENST00000622697 RAD54L2Q9Y4B4 1467 aa20.61■□□□□ 0.89
GABRB3-215ENST00000622697 TAOK2Q9UL54 1235 aa20.61■□□□□ 0.89
GABRB3-215ENST00000622697 FGD5Q6ZNL6 1462 aa20.6■□□□□ 0.89
GABRB3-215ENST00000622697 ZNF644Q9H582 1327 aaPredicted RBP20.6■□□□□ 0.89
GABRB3-215ENST00000622697 PLCB2Q00722 1185 aa20.6■□□□□ 0.89
GABRB3-215ENST00000622697 CHMP4BQ9H444 224 aaKnown RBP20.59■□□□□ 0.89
GABRB3-215ENST00000622697 MYBBP1AQ9BQG0 1328 aaKnown RBP20.59■□□□□ 0.89
GABRB3-215ENST00000622697 OS9Q13438 667 aaPredicted RBP20.59■□□□□ 0.89
GABRB3-215ENST00000622697 KIF15Q9NS87 1388 aa20.59■□□□□ 0.89
GABRB3-215ENST00000622697 EXOC6Q8TAG9 804 aa20.59■□□□□ 0.89
GABRB3-215ENST00000622697 USP47Q96K76 1375 aa20.58■□□□□ 0.89
GABRB3-215ENST00000622697 RRP7AQ9Y3A4 280 aaKnown RBP20.58■□□□□ 0.89
GABRB3-215ENST00000622697 DNTTIP2Q5QJE6 756 aaKnown RBP20.57■□□□□ 0.88
GABRB3-215ENST00000622697 GZF1Q9H116 711 aaPredicted RBP20.57■□□□□ 0.88
GABRB3-215ENST00000622697 HDGFL2Q7Z4V5 671 aaPredicted RBP20.56■□□□□ 0.88
GABRB3-215ENST00000622697 HAP1P54257 671 aaPredicted RBP20.55■□□□□ 0.88
GABRB3-215ENST00000622697 ZBED9Q6R2W3 1325 aa20.55■□□□□ 0.88
GABRB3-215ENST00000622697 TRAK1Q9UPV9 953 aa20.55■□□□□ 0.88
GABRB3-215ENST00000622697 SPAG9O60271 1321 aaKnown RBP20.54■□□□□ 0.88
GABRB3-215ENST00000622697 RWDD1Q9H446 243 aaPredicted RBP20.54■□□□□ 0.88
GABRB3-215ENST00000622697 FGD6Q6ZV73 1430 aa20.53■□□□□ 0.88
GABRB3-215ENST00000622697 PDE3BQ13370 1112 aa20.53■□□□□ 0.88
GABRB3-215ENST00000622697 ARAP1Q96P48 1450 aa20.53■□□□□ 0.88
GABRB3-215ENST00000622697 SLC4A3P48751 1232 aa20.52■□□□□ 0.88
GABRB3-215ENST00000622697 SMC4Q9NTJ3 1288 aa20.52■□□□□ 0.88
GABRB3-215ENST00000622697 CCDC144AA2RUR9 1427 aa20.52■□□□□ 0.88
GABRB3-215ENST00000622697 MFAP1P55081 439 aaKnown RBP20.52■□□□□ 0.88
GABRB3-215ENST00000622697 LRRC9Q6ZRR7 1453 aa20.52■□□□□ 0.87
GABRB3-215ENST00000622697 IPO8O15397 1037 aaKnown RBP20.51■□□□□ 0.87
GABRB3-215ENST00000622697 BCL2L13Q9BXK5 485 aa20.51■□□□□ 0.87
GABRB3-215ENST00000622697 EIF3AQ14152 1382 aaKnown RBP20.5■□□□□ 0.87
GABRB3-215ENST00000622697 RRP1P56182 461 aaKnown RBP20.5■□□□□ 0.87
GABRB3-215ENST00000622697 CENPJQ9HC77 1338 aaPredicted RBP20.5■□□□□ 0.87
GABRB3-215ENST00000622697 KCNJ4P48050 445 aa20.5■□□□□ 0.87
GABRB3-215ENST00000622697 SYNJ1O43426 1573 aa20.49■□□□□ 0.87
GABRB3-215ENST00000622697 CRBNQ96SW2 442 aa20.49■□□□□ 0.87
GABRB3-215ENST00000622697 KIF7Q2M1P5 1343 aa20.48■□□□□ 0.87
GABRB3-215ENST00000622697 PDE4AP27815 886 aa20.47■□□□□ 0.87
GABRB3-215ENST00000622697 RSPH4AQ5TD94 716 aa20.47■□□□□ 0.87
GABRB3-215ENST00000622697 RTF1Q92541 710 aaKnown RBP20.47■□□□□ 0.87
GABRB3-215ENST00000622697 WASHC2AQ641Q2 1341 aa20.46■□□□□ 0.87
GABRB3-215ENST00000622697 PMFBP1Q8TBY8 1022 aa20.45■□□□□ 0.86
GABRB3-215ENST00000622697 CCDC7Q96M83 1385 aa20.45■□□□□ 0.86
GABRB3-215ENST00000622697 MYOM3Q5VTT5 1437 aa20.45■□□□□ 0.86
GABRB3-215ENST00000622697 NAP1L2Q9ULW6 460 aaPredicted RBP20.45■□□□□ 0.86
GABRB3-215ENST00000622697 GAPVD1Q14C86 1478 aa20.44■□□□□ 0.86
GABRB3-215ENST00000622697 ZRSR1Q15695 479 aaKnown RBP20.44■□□□□ 0.86
GABRB3-215ENST00000622697 WASHC2CQ9Y4E1 1318 aa20.44■□□□□ 0.86
GABRB3-215ENST00000622697 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.44■□□□□ 0.86
GABRB3-215ENST00000622697 FGD1P98174 961 aa20.44■□□□□ 0.86
GABRB3-215ENST00000622697 UACAQ9BZF9 1416 aa20.44■□□□□ 0.86
GABRB3-215ENST00000622697 L1TD1Q5T7N2 865 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms