RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 CD109Q6YHK3 1445 aa16.84■□□□□ 0.29
SNORD3D-201ENST00000619178 FGD6Q6ZV73 1430 aa16.84■□□□□ 0.29
SNORD3D-201ENST00000619178 TEX14Q8IWB6 1497 aa16.84■□□□□ 0.29
SNORD3D-201ENST00000619178 PHLDB1Q86UU1 1377 aa16.83■□□□□ 0.28
SNORD3D-201ENST00000619178 PLEKHH2Q8IVE3 1493 aa16.83■□□□□ 0.28
SNORD3D-201ENST00000619178 CFDP1Q9UEE9 299 aaPredicted RBP16.83■□□□□ 0.28
SNORD3D-201ENST00000619178 RRBP1Q9P2E9 1410 aaKnown RBP16.82■□□□□ 0.28
SNORD3D-201ENST00000619178 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.81■□□□□ 0.28
SNORD3D-201ENST00000619178 FAM69CQ0P6D2 419 aa16.81■□□□□ 0.28
SNORD3D-201ENST00000619178 EFCAB2Q5VUJ9 269 aa16.8■□□□□ 0.28
SNORD3D-201ENST00000619178 CROCC2H7BZ55 1655 aa16.79■□□□□ 0.28
SNORD3D-201ENST00000619178 TRIM26Q12899 539 aaPredicted RBP16.79■□□□□ 0.28
SNORD3D-201ENST00000619178 FANCAO15360 1455 aa16.79■□□□□ 0.28
SNORD3D-201ENST00000619178 TCOF1Q13428 1488 aaKnown RBP16.79■□□□□ 0.28
SNORD3D-201ENST00000619178 PPRC1Q5VV67 1664 aaKnown RBP16.78■□□□□ 0.28
SNORD3D-201ENST00000619178 SAMD9LQ8IVG5 1584 aa16.78■□□□□ 0.28
SNORD3D-201ENST00000619178 CAMSAP2Q08AD1 1489 aa16.78■□□□□ 0.28
SNORD3D-201ENST00000619178 NEO1Q92859 1461 aa16.78■□□□□ 0.28
SNORD3D-201ENST00000619178 ADGBQ8N7X0 1667 aa16.77■□□□□ 0.28
SNORD3D-201ENST00000619178 DNMT1P26358 1616 aaKnown RBP16.77■□□□□ 0.27
SNORD3D-201ENST00000619178 ARHGEF5Q12774 1597 aa16.77■□□□□ 0.27
SNORD3D-201ENST00000619178 ABCC1P33527 1531 aa16.75■□□□□ 0.27
SNORD3D-201ENST00000619178 TRHP20396 242 aaPredicted RBP16.74■□□□□ 0.27
SNORD3D-201ENST00000619178 FAM50AQ14320 339 aaKnown RBP16.74■□□□□ 0.27
SNORD3D-201ENST00000619178 RSPH4AQ5TD94 716 aa16.74■□□□□ 0.27
SNORD3D-201ENST00000619178 ZNF777Q9ULD5 760 aaPredicted RBP16.73■□□□□ 0.27
SNORD3D-201ENST00000619178 KIAA1107Q9UPP5 1409 aa16.72■□□□□ 0.27
SNORD3D-201ENST00000619178 ADGRL1O94910 1474 aa16.72■□□□□ 0.27
SNORD3D-201ENST00000619178 AKNAQ7Z591 1439 aa16.7■□□□□ 0.26
SNORD3D-201ENST00000619178 SYCP2Q9BX26 1530 aa16.7■□□□□ 0.26
SNORD3D-201ENST00000619178 RICTORQ6R327 1708 aa16.69■□□□□ 0.26
SNORD3D-201ENST00000619178 CCDC141Q6ZP82 1450 aa16.68■□□□□ 0.26
SNORD3D-201ENST00000619178 MAST1Q9Y2H9 1570 aa16.67■□□□□ 0.26
SNORD3D-201ENST00000619178 ZNF518AQ6AHZ1 1483 aa16.67■□□□□ 0.26
SNORD3D-201ENST00000619178 SHANK2Q9UPX8 1470 aa16.67■□□□□ 0.26
SNORD3D-201ENST00000619178 DAPK1P53355 1430 aa16.65■□□□□ 0.26
SNORD3D-201ENST00000619178 SCAPERQ9BY12 1400 aa16.64■□□□□ 0.25
SNORD3D-201ENST00000619178 TSPY4P0CV99 314 aa16.64■□□□□ 0.25
SNORD3D-201ENST00000619178 TSPY10P0CW01 314 aa16.64■□□□□ 0.25
SNORD3D-201ENST00000619178 DENND4BO75064 1496 aaPredicted RBP16.64■□□□□ 0.25
SNORD3D-201ENST00000619178 GCC2Q8IWJ2 1684 aa16.64■□□□□ 0.25
SNORD3D-201ENST00000619178 HECW2Q9P2P5 1572 aa16.63■□□□□ 0.25
SNORD3D-201ENST00000619178 PLXNC1O60486 1568 aa16.62■□□□□ 0.25
SNORD3D-201ENST00000619178 ZNF644Q9H582 1327 aaPredicted RBP16.62■□□□□ 0.25
SNORD3D-201ENST00000619178 KDM6BO15054 1643 aa16.62■□□□□ 0.25
SNORD3D-201ENST00000619178 MBD5Q9P267 1494 aa16.61■□□□□ 0.25
SNORD3D-201ENST00000619178 KDM5CP41229 1560 aa16.61■□□□□ 0.25
SNORD3D-201ENST00000619178 INO80Q9ULG1 1556 aaPredicted RBP16.6■□□□□ 0.25
SNORD3D-201ENST00000619178 POGZQ7Z3K3 1410 aa16.6■□□□□ 0.25
SNORD3D-201ENST00000619178 HNRNPMP52272 730 aaKnown RBP eCLIP16.59■□□□□ 0.25
SNORD3D-201ENST00000619178 ABCC5O15440 1437 aa16.59■□□□□ 0.25
SNORD3D-201ENST00000619178 ITGAEP38570 1179 aa16.58■□□□□ 0.24
SNORD3D-201ENST00000619178 RTEL1-TNFRSF6BF6WH68 1400 aa16.58■□□□□ 0.24
SNORD3D-201ENST00000619178 C9orf84Q5VXU9 1444 aa16.58■□□□□ 0.24
SNORD3D-201ENST00000619178 ATP7AQ04656 1500 aa16.58■□□□□ 0.24
SNORD3D-201ENST00000619178 ZMYM4Q5VZL5 1548 aa16.58■□□□□ 0.24
SNORD3D-201ENST00000619178 ARHGEF12Q9NZN5 1544 aa16.58■□□□□ 0.24
SNORD3D-201ENST00000619178 KIDINS220Q9ULH0 1771 aa16.58■□□□□ 0.24
SNORD3D-201ENST00000619178 ADGRL2O95490 1459 aa16.57■□□□□ 0.24
SNORD3D-201ENST00000619178 ROCK1Q13464 1354 aa16.57■□□□□ 0.24
SNORD3D-201ENST00000619178 ANKRD30AQ9BXX3 1397 aa16.57■□□□□ 0.24
SNORD3D-201ENST00000619178 ACIN1Q9UKV3 1341 aaKnown RBP16.57■□□□□ 0.24
SNORD3D-201ENST00000619178 MAGI2Q86UL8 1455 aa16.55■□□□□ 0.24
SNORD3D-201ENST00000619178 SPAG9O60271 1321 aaKnown RBP16.55■□□□□ 0.24
SNORD3D-201ENST00000619178 MYT1LQ9UL68 1186 aa16.55■□□□□ 0.24
SNORD3D-201ENST00000619178 ZFYVE16Q7Z3T8 1539 aa16.55■□□□□ 0.24
SNORD3D-201ENST00000619178 MLH3Q9UHC1 1453 aa16.54■□□□□ 0.24
SNORD3D-201ENST00000619178 TRAPPC8Q9Y2L5 1435 aa16.54■□□□□ 0.24
SNORD3D-201ENST00000619178 PCGF6Q9BYE7 350 aa16.54■□□□□ 0.24
SNORD3D-201ENST00000619178 FRMPD1Q5SYB0 1578 aa16.54■□□□□ 0.24
SNORD3D-201ENST00000619178 EIF2AK4Q9P2K8 1649 aaKnown RBP16.52■□□□□ 0.23
SNORD3D-201ENST00000619178 DUOX2Q9NRD8 1548 aa16.51■□□□□ 0.23
SNORD3D-201ENST00000619178 HFM1A2PYH4 1435 aa16.5■□□□□ 0.23
SNORD3D-201ENST00000619178 ABCA6Q8N139 1617 aa16.49■□□□□ 0.23
SNORD3D-201ENST00000619178 NCOA1Q15788 1441 aa16.49■□□□□ 0.23
SNORD3D-201ENST00000619178 AFAP1Q8N556 730 aa16.49■□□□□ 0.23
SNORD3D-201ENST00000619178 CHIC2Q9UKJ5 165 aa16.48■□□□□ 0.23
SNORD3D-201ENST00000619178 BCORL1Q5H9F3 1711 aa16.48■□□□□ 0.23
SNORD3D-201ENST00000619178 PTPRKQ15262 1439 aa16.47■□□□□ 0.23
SNORD3D-201ENST00000619178 ARHGEF40Q8TER5 1519 aa16.47■□□□□ 0.23
SNORD3D-201ENST00000619178 REREQ9P2R6 1566 aa16.47■□□□□ 0.23
SNORD3D-201ENST00000619178 DIP2CQ9Y2E4 1556 aa16.47■□□□□ 0.23
SNORD3D-201ENST00000619178 SETD5Q9C0A6 1442 aa16.46■□□□□ 0.23
SNORD3D-201ENST00000619178 RAPGEF3O95398 923 aa16.46■□□□□ 0.23
SNORD3D-201ENST00000619178 KIF15Q9NS87 1388 aa16.46■□□□□ 0.23
SNORD3D-201ENST00000619178 ERBINQ96RT1 1412 aa16.45■□□□□ 0.22
SNORD3D-201ENST00000619178 NAIPQ13075 1403 aa16.45■□□□□ 0.22
SNORD3D-201ENST00000619178 ANKRD50Q9ULJ7 1429 aa16.43■□□□□ 0.22
SNORD3D-201ENST00000619178 HRCP23327 699 aa16.42■□□□□ 0.22
SNORD3D-201ENST00000619178 RRP7BPQ9NSQ0 103 aa16.42■□□□□ 0.22
SNORD3D-201ENST00000619178 ATP10AO60312 1499 aa16.42■□□□□ 0.22
SNORD3D-201ENST00000619178 A2MP01023 1474 aa16.42■□□□□ 0.22
SNORD3D-201ENST00000619178 COL17A1Q9UMD9 1497 aaPredicted RBP16.41■□□□□ 0.22
SNORD3D-201ENST00000619178 UNC13BO14795 1591 aa16.4■□□□□ 0.22
SNORD3D-201ENST00000619178 DEPDC5O75140 1603 aa16.4■□□□□ 0.22
SNORD3D-201ENST00000619178 DHX29Q7Z478 1369 aaKnown RBP16.38■□□□□ 0.21
SNORD3D-201ENST00000619178 RNF17Q9BXT8 1623 aaKnown RBP16.38■□□□□ 0.21
SNORD3D-201ENST00000619178 ZC3H13Q5T200 1668 aaKnown RBP16.38■□□□□ 0.21
SNORD3D-201ENST00000619178 RAB3GAP2Q9H2M9 1393 aa16.38■□□□□ 0.21
SNORD3D-201ENST00000619178 AGLP35573 1532 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms