RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.7□□□□□ -0.541e-323■■■■■ 281.4
SNORD3D-201ENST00000619178 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.01□□□□□ -0.494e-65■■■■■ 146
SNORD3D-201ENST00000619178 WDR43Q15061 677 aaKnown RBP eCLIP14.76□□□□□ -0.051e-32■■■■■ 257.9
SNORD3D-201ENST00000619178 AATFQ9NY61 560 aaKnown RBP eCLIP13.19□□□□□ -0.36e-26■■■■■ 193.1
SNORD3D-201ENST00000619178 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.31□□□□□ -0.446e-21■■■■□ 25.5
SNORD3D-201ENST00000619178 NOLC1Q14978 699 aaKnown RBP eCLIP12.06□□□□□ -0.485e-19■■□□□ 13.9
SNORD3D-201ENST00000619178 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.11□□□□□ -0.638e-17■■■□□ 15.3
SNORD3D-201ENST00000619178 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.51□□□□□ -0.735e-16■■■■■ 101
SNORD3D-201ENST00000619178 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.05□□□□□ -0.645e-14■■■■■ 33.9
SNORD3D-201ENST00000619178 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.4□□□□□ -0.745e-11■■■■□ 23.4
SNORD3D-201ENST00000619178 FTOQ9C0B1 505 aaKnown RBP eCLIP12.42□□□□□ -0.422e-9■□□□□ 9.3
SNORD3D-201ENST00000619178 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.18□□□□□ -0.622e-9■■■■□ 25.4
SNORD3D-201ENST00000619178 NIP7Q9Y221 180 aaKnown RBP eCLIP13.85□□□□□ -0.193e-9■■■■■ 45.9
SNORD3D-201ENST00000619178 DDX21Q9NR30 783 aaKnown RBP eCLIP14.08□□□□□ -0.168e-7■■■■■ 27.9
Retrieved 14 of 14 RNA–protein pairs in 5.3 ms