RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 NISCHQ9Y2I1 1504 aa25.82■■□□□ 1.72
SNORD3D-201ENST00000619178 CCDC180Q9P1Z9 1646 aa22.97■■□□□ 1.27
SNORD3D-201ENST00000619178 ABCC9O60706 1549 aa21.75■■□□□ 1.07
SNORD3D-201ENST00000619178 ZCCHC6Q5VYS8 1495 aaKnown RBP21.59■■□□□ 1.05
SNORD3D-201ENST00000619178 DCAF1Q9Y4B6 1507 aa21.46■■□□□ 1.03
SNORD3D-201ENST00000619178 NACADO15069 1562 aa21.39■■□□□ 1.01
SNORD3D-201ENST00000619178 MYO15BQ96JP2 1530 aa21.39■■□□□ 1.01
SNORD3D-201ENST00000619178 RB1CC1Q8TDY2 1594 aa21.32■■□□□ 1
SNORD3D-201ENST00000619178 DCAF8L2P0C7V8 631 aa21.31■■□□□ 1
SNORD3D-201ENST00000619178 UNC13AQ9UPW8 1703 aa20.91■□□□□ 0.94
SNORD3D-201ENST00000619178 SCRIBQ14160 1630 aa20.82■□□□□ 0.92
SNORD3D-201ENST00000619178 SHROOM4Q9ULL8 1493 aa20.54■□□□□ 0.88
SNORD3D-201ENST00000619178 BICRAQ9NZM4 1560 aa20.51■□□□□ 0.87
SNORD3D-201ENST00000619178 PABPN1Q86U42 306 aaKnown RBP eCLIP20.29■□□□□ 0.84
SNORD3D-201ENST00000619178 BAZ1AQ9NRL2 1556 aaPredicted RBP20.07■□□□□ 0.8
SNORD3D-201ENST00000619178 SMARCA4P51532 1647 aa20■□□□□ 0.79
SNORD3D-201ENST00000619178 EIF4G1Q04637 1599 aaKnown RBP19.98■□□□□ 0.79
SNORD3D-201ENST00000619178 CECR2Q9BXF3 1484 aa19.93■□□□□ 0.78
SNORD3D-201ENST00000619178 MROH2BQ7Z745 1585 aa19.84■□□□□ 0.77
SNORD3D-201ENST00000619178 SMARCA2P51531 1590 aa19.82■□□□□ 0.76
SNORD3D-201ENST00000619178 CC2D2AQ9P2K1 1620 aa19.8■□□□□ 0.76
SNORD3D-201ENST00000619178 PEG3Q9GZU2 1588 aa19.79■□□□□ 0.76
SNORD3D-201ENST00000619178 RSF1Q96T23 1441 aaPredicted RBP19.76■□□□□ 0.75
SNORD3D-201ENST00000619178 WIZO95785 1651 aa19.75■□□□□ 0.75
SNORD3D-201ENST00000619178 ATAD2BQ9ULI0 1458 aa19.67■□□□□ 0.74
SNORD3D-201ENST00000619178 HMGXB3Q12766 1538 aa19.66■□□□□ 0.74
SNORD3D-201ENST00000619178 BAZ1BQ9UIG0 1483 aaKnown RBP19.61■□□□□ 0.73
SNORD3D-201ENST00000619178 NCAPD3P42695 1498 aa19.6■□□□□ 0.73
SNORD3D-201ENST00000619178 SUPT5HO00267 1087 aaKnown RBP19.6■□□□□ 0.73
SNORD3D-201ENST00000619178 TOP2AP11388 1531 aaKnown RBP19.57■□□□□ 0.72
SNORD3D-201ENST00000619178 DNAJC5BQ9UF47 199 aa19.33■□□□□ 0.68
SNORD3D-201ENST00000619178 PRDM2Q13029 1718 aa19.28■□□□□ 0.68
SNORD3D-201ENST00000619178 CCDC88BA6NC98 1476 aa19.25■□□□□ 0.67
SNORD3D-201ENST00000619178 LAMC3Q9Y6N6 1575 aa19.15■□□□□ 0.66
SNORD3D-201ENST00000619178 CADPSQ9ULU8 1353 aa19.05■□□□□ 0.64
SNORD3D-201ENST00000619178 CFTRP13569 1480 aa19.04■□□□□ 0.64
SNORD3D-201ENST00000619178 PDS5BQ9NTI5 1447 aa18.94■□□□□ 0.62
SNORD3D-201ENST00000619178 KIF21AQ7Z4S6 1674 aa18.93■□□□□ 0.62
SNORD3D-201ENST00000619178 NESP48681 1621 aa18.92■□□□□ 0.62
SNORD3D-201ENST00000619178 FANCD2Q9BXW9 1451 aa18.86■□□□□ 0.61
SNORD3D-201ENST00000619178 CEP164Q9UPV0 1460 aa18.85■□□□□ 0.61
SNORD3D-201ENST00000619178 ERCC6Q03468 1493 aa18.82■□□□□ 0.6
SNORD3D-201ENST00000619178 ABCC8Q09428 1581 aa18.77■□□□□ 0.6
SNORD3D-201ENST00000619178 BIVM-ERCC5R4GMW8 1640 aa18.72■□□□□ 0.59
SNORD3D-201ENST00000619178 DNMBPQ6XZF7 1577 aa18.71■□□□□ 0.59
SNORD3D-201ENST00000619178 WRNQ14191 1432 aaPredicted RBP eCLIP18.7■□□□□ 0.58
SNORD3D-201ENST00000619178 MRC2Q9UBG0 1479 aa18.7■□□□□ 0.58
SNORD3D-201ENST00000619178 TOP2BQ02880 1626 aa18.68■□□□□ 0.58
SNORD3D-201ENST00000619178 THOC2Q8NI27 1593 aaKnown RBP18.68■□□□□ 0.58
SNORD3D-201ENST00000619178 WDR62O43379 1518 aa18.63■□□□□ 0.57
SNORD3D-201ENST00000619178 SYNJ1O43426 1573 aa18.62■□□□□ 0.57
SNORD3D-201ENST00000619178 CUX1P39880 1505 aa18.61■□□□□ 0.57
SNORD3D-201ENST00000619178 TOPBP1Q92547 1522 aa18.61■□□□□ 0.57
SNORD3D-201ENST00000619178 URB2Q14146 1524 aaKnown RBP18.59■□□□□ 0.57
SNORD3D-201ENST00000619178 TRIM41Q8WV44 630 aa18.57■□□□□ 0.56
SNORD3D-201ENST00000619178 CHIC1Q5VXU3 224 aa18.54■□□□□ 0.56
SNORD3D-201ENST00000619178 FGD5Q6ZNL6 1462 aa18.5■□□□□ 0.55
SNORD3D-201ENST00000619178 CUX2O14529 1486 aa18.46■□□□□ 0.55
SNORD3D-201ENST00000619178 POLA1P09884 1462 aaPredicted RBP18.46■□□□□ 0.55
SNORD3D-201ENST00000619178 WDR97A6NE52 1622 aa18.45■□□□□ 0.54
SNORD3D-201ENST00000619178 TARBP1Q13395 1621 aaKnown RBP18.41■□□□□ 0.54
SNORD3D-201ENST00000619178 IFT140Q96RY7 1462 aa18.41■□□□□ 0.54
SNORD3D-201ENST00000619178 SOGA1O94964 1423 aa18.4■□□□□ 0.54
SNORD3D-201ENST00000619178 ABCA10Q8WWZ4 1543 aa18.37■□□□□ 0.53
SNORD3D-201ENST00000619178 EEA1Q15075 1411 aa18.33■□□□□ 0.53
SNORD3D-201ENST00000619178 PBRM1Q86U86 1689 aa18.33■□□□□ 0.52
SNORD3D-201ENST00000619178 RAD54L2Q9Y4B4 1467 aa18.31■□□□□ 0.52
SNORD3D-201ENST00000619178 KIF27Q86VH2 1401 aa18.31■□□□□ 0.52
SNORD3D-201ENST00000619178 ABCA5Q8WWZ7 1642 aa18.3■□□□□ 0.52
SNORD3D-201ENST00000619178 EIF4G3O43432 1585 aaKnown RBP18.28■□□□□ 0.52
SNORD3D-201ENST00000619178 CUL7Q14999 1698 aa18.24■□□□□ 0.51
SNORD3D-201ENST00000619178 GAPVD1Q14C86 1478 aa18.23■□□□□ 0.51
SNORD3D-201ENST00000619178 ERICH3Q5RHP9 1530 aa18.22■□□□□ 0.51
SNORD3D-201ENST00000619178 GRIN2BQ13224 1484 aa18.18■□□□□ 0.5
SNORD3D-201ENST00000619178 TDRD9Q8NDG6 1382 aaKnown RBP18.17■□□□□ 0.5
SNORD3D-201ENST00000619178 ZNF608Q9ULD9 1512 aaPredicted RBP18.16■□□□□ 0.5
SNORD3D-201ENST00000619178 AQRO60306 1485 aaKnown RBP eCLIP18.13■□□□□ 0.49
SNORD3D-201ENST00000619178 MAGI1Q96QZ7 1491 aaPredicted RBP18.12■□□□□ 0.49
SNORD3D-201ENST00000619178 RUSC2Q8N2Y8 1516 aa18.12■□□□□ 0.49
SNORD3D-201ENST00000619178 KIF21BO75037 1637 aa18.12■□□□□ 0.49
SNORD3D-201ENST00000619178 CSRNP3Q8WYN3 585 aa18.1■□□□□ 0.49
SNORD3D-201ENST00000619178 ADAMTS12P58397 1594 aa18.08■□□□□ 0.49
SNORD3D-201ENST00000619178 FAM9AQ8IZU1 332 aaPredicted RBP18.07■□□□□ 0.48
SNORD3D-201ENST00000619178 IGF1RP08069 1367 aa18.04■□□□□ 0.48
SNORD3D-201ENST00000619178 CHD1O14646 1710 aa18.04■□□□□ 0.48
SNORD3D-201ENST00000619178 SNAPC4Q5SXM2 1469 aa18.04■□□□□ 0.48
SNORD3D-201ENST00000619178 FHAD1B1AJZ9 1412 aa18.04■□□□□ 0.48
SNORD3D-201ENST00000619178 CTTNBP2Q8WZ74 1663 aa18.03■□□□□ 0.48
SNORD3D-201ENST00000619178 CARMIL1Q5VZK9 1371 aa18.02■□□□□ 0.47
SNORD3D-201ENST00000619178 RAPGEF2Q9Y4G8 1499 aa18.01■□□□□ 0.47
SNORD3D-201ENST00000619178 SYNJ2O15056 1496 aa18.01■□□□□ 0.47
SNORD3D-201ENST00000619178 PRXQ9BXM0 1461 aa18■□□□□ 0.47
SNORD3D-201ENST00000619178 GOLGA3Q08378 1498 aa17.99■□□□□ 0.47
SNORD3D-201ENST00000619178 CHMP7Q8WUX9 453 aaPredicted RBP17.93■□□□□ 0.46
SNORD3D-201ENST00000619178 GRIN2AQ12879 1464 aa17.93■□□□□ 0.46
SNORD3D-201ENST00000619178 FBLN2P98095 1184 aa17.87■□□□□ 0.45
SNORD3D-201ENST00000619178 UBTFP17480 764 aaKnown RBP17.85■□□□□ 0.45
SNORD3D-201ENST00000619178 IQGAP2Q13576 1575 aa17.83■□□□□ 0.44
SNORD3D-201ENST00000619178 CEP170Q5SW79 1584 aa17.81■□□□□ 0.44
SNORD3D-201ENST00000619178 TNIKQ9UKE5 1360 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms