RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 ITSN2Q9NZM3 1697 aa35.17■■■■□ 3.22
CBWD3-213ENST00000618217 FANCAO15360 1455 aa35.14■■■■□ 3.22
CBWD3-213ENST00000618217 ARHGAP5Q13017 1502 aa35.13■■■■□ 3.22
CBWD3-213ENST00000618217 MYOM3Q5VTT5 1437 aa35.13■■■■□ 3.21
CBWD3-213ENST00000618217 NEO1Q92859 1461 aa35.11■■■■□ 3.21
CBWD3-213ENST00000618217 EFCAB2Q5VUJ9 269 aa35.11■■■■□ 3.21
CBWD3-213ENST00000618217 CFDP1Q9UEE9 299 aaPredicted RBP35.1■■■■□ 3.21
CBWD3-213ENST00000618217 CFAP74Q9C0B2 1584 aa35.09■■■■□ 3.21
CBWD3-213ENST00000618217 AKNAQ7Z591 1439 aa35.05■■■■□ 3.2
CBWD3-213ENST00000618217 MIA2Q96PC5 1412 aa35.04■■■■□ 3.2
CBWD3-213ENST00000618217 SAMD9LQ8IVG5 1584 aa35.03■■■■□ 3.2
CBWD3-213ENST00000618217 FGD6Q6ZV73 1430 aa35■■■■□ 3.19
CBWD3-213ENST00000618217 ZNF644Q9H582 1327 aaPredicted RBP34.99■■■■□ 3.19
CBWD3-213ENST00000618217 ZNF777Q9ULD5 760 aaPredicted RBP34.98■■■■□ 3.19
CBWD3-213ENST00000618217 COL17A1Q9UMD9 1497 aaPredicted RBP34.96■■■■□ 3.19
CBWD3-213ENST00000618217 ADGRL1O94910 1474 aa34.96■■■■□ 3.19
CBWD3-213ENST00000618217 ABCC1P33527 1531 aa34.95■■■■□ 3.19
CBWD3-213ENST00000618217 ARHGEF12Q9NZN5 1544 aa34.93■■■■□ 3.18
CBWD3-213ENST00000618217 PTPN23Q9H3S7 1636 aa34.93■■■■□ 3.18
CBWD3-213ENST00000618217 CAMSAP2Q08AD1 1489 aa34.93■■■■□ 3.18
CBWD3-213ENST00000618217 SCAPERQ9BY12 1400 aa34.92■■■■□ 3.18
CBWD3-213ENST00000618217 KIAA1107Q9UPP5 1409 aa34.92■■■■□ 3.18
CBWD3-213ENST00000618217 PLEKHH2Q8IVE3 1493 aa34.91■■■■□ 3.18
CBWD3-213ENST00000618217 TCOF1Q13428 1488 aaKnown RBP34.9■■■■□ 3.18
CBWD3-213ENST00000618217 SYCP2Q9BX26 1530 aa34.87■■■■□ 3.17
CBWD3-213ENST00000618217 KDM6BO15054 1643 aa34.87■■■■□ 3.17
CBWD3-213ENST00000618217 MBD5Q9P267 1494 aa34.86■■■■□ 3.17
CBWD3-213ENST00000618217 DENND4BO75064 1496 aaPredicted RBP34.85■■■■□ 3.17
CBWD3-213ENST00000618217 HNRNPMP52272 730 aaKnown RBP eCLIP34.84■■■■□ 3.17
CBWD3-213ENST00000618217 RICTORQ6R327 1708 aa34.84■■■■□ 3.17
CBWD3-213ENST00000618217 RRBP1Q9P2E9 1410 aaKnown RBP34.84■■■■□ 3.17
CBWD3-213ENST00000618217 FRMPD1Q5SYB0 1578 aa34.83■■■■□ 3.17
CBWD3-213ENST00000618217 RAPGEF3O95398 923 aa34.82■■■■□ 3.16
CBWD3-213ENST00000618217 POGZQ7Z3K3 1410 aa34.82■■■■□ 3.16
CBWD3-213ENST00000618217 TRAPPC8Q9Y2L5 1435 aa34.82■■■■□ 3.16
CBWD3-213ENST00000618217 ARHGEF5Q12774 1597 aa34.78■■■■□ 3.16
CBWD3-213ENST00000618217 AFAP1Q8N556 730 aa34.77■■■■□ 3.16
CBWD3-213ENST00000618217 ZNF518AQ6AHZ1 1483 aa34.77■■■■□ 3.16
CBWD3-213ENST00000618217 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.76■■■■□ 3.16
CBWD3-213ENST00000618217 KDM5CP41229 1560 aa34.74■■■■□ 3.15
CBWD3-213ENST00000618217 FAM50AQ14320 339 aaKnown RBP34.73■■■■□ 3.15
CBWD3-213ENST00000618217 RSPH4AQ5TD94 716 aa34.73■■■■□ 3.15
CBWD3-213ENST00000618217 CCDC141Q6ZP82 1450 aa34.7■■■■□ 3.15
CBWD3-213ENST00000618217 ZMYM4Q5VZL5 1548 aa34.7■■■■□ 3.15
CBWD3-213ENST00000618217 DNMT1P26358 1616 aaKnown RBP34.7■■■■□ 3.14
CBWD3-213ENST00000618217 ABCC5O15440 1437 aa34.67■■■■□ 3.14
CBWD3-213ENST00000618217 DAPK1P53355 1430 aa34.65■■■■□ 3.14
CBWD3-213ENST00000618217 MLH3Q9UHC1 1453 aa34.63■■■■□ 3.13
CBWD3-213ENST00000618217 CROCC2H7BZ55 1655 aa34.63■■■■□ 3.13
CBWD3-213ENST00000618217 HECW2Q9P2P5 1572 aa34.6■■■■□ 3.13
CBWD3-213ENST00000618217 MAGI2Q86UL8 1455 aa34.6■■■■□ 3.13
CBWD3-213ENST00000618217 SPAG9O60271 1321 aaKnown RBP34.6■■■■□ 3.13
CBWD3-213ENST00000618217 KIDINS220Q9ULH0 1771 aa34.59■■■■□ 3.13
CBWD3-213ENST00000618217 INO80Q9ULG1 1556 aaPredicted RBP34.59■■■■□ 3.13
CBWD3-213ENST00000618217 MAST1Q9Y2H9 1570 aa34.58■■■■□ 3.13
CBWD3-213ENST00000618217 TSPY4P0CV99 314 aa34.57■■■■□ 3.12
CBWD3-213ENST00000618217 TSPY10P0CW01 314 aa34.57■■■■□ 3.12
CBWD3-213ENST00000618217 SHANK2Q9UPX8 1470 aa34.57■■■■□ 3.12
CBWD3-213ENST00000618217 RTEL1-TNFRSF6BF6WH68 1400 aa34.57■■■■□ 3.12
CBWD3-213ENST00000618217 ZFYVE16Q7Z3T8 1539 aa34.56■■■■□ 3.12
CBWD3-213ENST00000618217 PTPRKQ15262 1439 aa34.56■■■■□ 3.12
CBWD3-213ENST00000618217 ATP7AQ04656 1500 aa34.55■■■■□ 3.12
CBWD3-213ENST00000618217 C9orf84Q5VXU9 1444 aa34.54■■■■□ 3.12
CBWD3-213ENST00000618217 YEATS2Q9ULM3 1422 aa34.54■■■■□ 3.12
CBWD3-213ENST00000618217 ARHGEF40Q8TER5 1519 aa34.5■■■■□ 3.11
CBWD3-213ENST00000618217 ABCA6Q8N139 1617 aa34.49■■■■□ 3.11
CBWD3-213ENST00000618217 DIP2CQ9Y2E4 1556 aa34.47■■■■□ 3.11
CBWD3-213ENST00000618217 ITGAEP38570 1179 aa34.47■■■■□ 3.11
CBWD3-213ENST00000618217 CHIC2Q9UKJ5 165 aa34.45■■■■□ 3.11
CBWD3-213ENST00000618217 MYT1LQ9UL68 1186 aa34.45■■■■□ 3.11
CBWD3-213ENST00000618217 ADGRL2O95490 1459 aa34.45■■■■□ 3.1
CBWD3-213ENST00000618217 PLXNC1O60486 1568 aa34.44■■■■□ 3.1
CBWD3-213ENST00000618217 ADGBQ8N7X0 1667 aa34.43■■■■□ 3.1
CBWD3-213ENST00000618217 NCOA1Q15788 1441 aa34.42■■■■□ 3.1
CBWD3-213ENST00000618217 ATP10AO60312 1499 aa34.41■■■■□ 3.1
CBWD3-213ENST00000618217 ROCK1Q13464 1354 aa34.38■■■■□ 3.09
CBWD3-213ENST00000618217 ANKRD30AQ9BXX3 1397 aa34.38■■■■□ 3.09
CBWD3-213ENST00000618217 REREQ9P2R6 1566 aa34.36■■■■□ 3.09
CBWD3-213ENST00000618217 RRP7BPQ9NSQ0 103 aa34.33■■■■□ 3.09
CBWD3-213ENST00000618217 SIGLEC1Q9BZZ2 1709 aa34.33■■■■□ 3.09
CBWD3-213ENST00000618217 KIF15Q9NS87 1388 aa34.33■■■■□ 3.09
CBWD3-213ENST00000618217 A2MP01023 1474 aa34.33■■■■□ 3.09
CBWD3-213ENST00000618217 DHX29Q7Z478 1369 aaKnown RBP34.3■■■■□ 3.08
CBWD3-213ENST00000618217 TRIM26Q12899 539 aaPredicted RBP34.3■■■■□ 3.08
CBWD3-213ENST00000618217 DUOX2Q9NRD8 1548 aa34.29■■■■□ 3.08
CBWD3-213ENST00000618217 AGLP35573 1532 aa34.24■■■■□ 3.07
CBWD3-213ENST00000618217 HFM1A2PYH4 1435 aa34.2■■■■□ 3.07
CBWD3-213ENST00000618217 NAIPQ13075 1403 aa34.2■■■■□ 3.07
CBWD3-213ENST00000618217 ERBINQ96RT1 1412 aa34.19■■■■□ 3.06
CBWD3-213ENST00000618217 BCORL1Q5H9F3 1711 aa34.19■■■■□ 3.06
CBWD3-213ENST00000618217 ANKRD50Q9ULJ7 1429 aa34.17■■■■□ 3.06
CBWD3-213ENST00000618217 GCC2Q8IWJ2 1684 aa34.17■■■■□ 3.06
CBWD3-213ENST00000618217 EIF2AK4Q9P2K8 1649 aaKnown RBP34.17■■■■□ 3.06
CBWD3-213ENST00000618217 ARID4BQ4LE39 1312 aaPredicted RBP34.12■■■■□ 3.05
CBWD3-213ENST00000618217 KIF3BO15066 747 aa34.11■■■■□ 3.05
CBWD3-213ENST00000618217 RNF17Q9BXT8 1623 aaKnown RBP34.07■■■■□ 3.04
CBWD3-213ENST00000618217 DEPDC5O75140 1603 aa34.04■■■■□ 3.04
CBWD3-213ENST00000618217 SETD5Q9C0A6 1442 aa34.03■■■■□ 3.04
CBWD3-213ENST00000618217 MROH1Q8NDA8 1641 aa34.03■■■■□ 3.04
CBWD3-213ENST00000618217 MLECQ14165 292 aa34■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms