RNA–Protein interactions for RNA: ENST00000617797.1

CUL1-204, Transcript of cullin 1, humanhuman

TSL 1 (best) BASIC

Gene CUL1, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-204ENST00000617797 HFM1A2PYH4 1435 aa9.46□□□□□ -0.89
CUL1-204ENST00000617797 ARID3CA6NKF2 412 aa9.45□□□□□ -0.9
CUL1-204ENST00000617797 NAIPQ13075 1403 aa9.44□□□□□ -0.9
CUL1-204ENST00000617797 MIA2Q96PC5 1412 aa9.44□□□□□ -0.9
CUL1-204ENST00000617797 TAOK2Q9UL54 1235 aa9.44□□□□□ -0.9
CUL1-204ENST00000617797 CHD1O14646 1710 aa9.44□□□□□ -0.9
CUL1-204ENST00000617797 CARMIL2Q6F5E8 1435 aa9.43□□□□□ -0.9
CUL1-204ENST00000617797 PLB1Q6P1J6 1458 aa9.42□□□□□ -0.9
CUL1-204ENST00000617797 FBXO3Q9UK99 471 aa9.42□□□□□ -0.9
CUL1-204ENST00000617797 ADCY10Q96PN6 1610 aa9.42□□□□□ -0.9
CUL1-204ENST00000617797 SAMD1Q6SPF0 538 aaPredicted RBP9.42□□□□□ -0.9
CUL1-204ENST00000617797 JPH4Q96JJ6 628 aa9.42□□□□□ -0.9
CUL1-204ENST00000617797 UACAQ9BZF9 1416 aa9.42□□□□□ -0.9
CUL1-204ENST00000617797 ITSN2Q9NZM3 1697 aa9.41□□□□□ -0.9
CUL1-204ENST00000617797 SIN3AQ96ST3 1273 aa9.41□□□□□ -0.9
CUL1-204ENST00000617797 HAP1P54257 671 aaPredicted RBP9.41□□□□□ -0.9
CUL1-204ENST00000617797 AKNAQ7Z591 1439 aa9.4□□□□□ -0.9
CUL1-204ENST00000617797 ABCA8O94911 1581 aa9.4□□□□□ -0.9
CUL1-204ENST00000617797 DNMT1P26358 1616 aaKnown RBP9.4□□□□□ -0.9
CUL1-204ENST00000617797 TROQ12816 1431 aaPredicted RBP9.4□□□□□ -0.91
CUL1-204ENST00000617797 KIF14Q15058 1648 aa9.39□□□□□ -0.91
CUL1-204ENST00000617797 NEUROD1Q13562 356 aa9.39□□□□□ -0.91
CUL1-204ENST00000617797 CDK11AQ9UQ88 783 aaPredicted RBP9.39□□□□□ -0.91
CUL1-204ENST00000617797 KDM6BO15054 1643 aa9.39□□□□□ -0.91
CUL1-204ENST00000617797 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.39□□□□□ -0.914e-8■■■■□ 24.3
CUL1-204ENST00000617797 PRG4Q92954 1404 aaPredicted RBP9.38□□□□□ -0.91
CUL1-204ENST00000617797 MIER1Q8N108 512 aa9.38□□□□□ -0.91
CUL1-204ENST00000617797 CHIC2Q9UKJ5 165 aa9.38□□□□□ -0.91
CUL1-204ENST00000617797 RRP7BPQ9NSQ0 103 aa9.37□□□□□ -0.91
CUL1-204ENST00000617797 DAPK1P53355 1430 aa9.37□□□□□ -0.91
CUL1-204ENST00000617797 TIMELESSQ9UNS1 1208 aa9.37□□□□□ -0.91
CUL1-204ENST00000617797 CDC42BPAQ5VT25 1732 aa9.36□□□□□ -0.91
CUL1-204ENST00000617797 ADGBQ8N7X0 1667 aa9.36□□□□□ -0.91
CUL1-204ENST00000617797 BCANQ96GW7 911 aa9.36□□□□□ -0.91
CUL1-204ENST00000617797 CROCC2H7BZ55 1655 aa9.36□□□□□ -0.91
CUL1-204ENST00000617797 SHROOM2Q13796 1616 aa9.35□□□□□ -0.91
CUL1-204ENST00000617797 ABCC5O15440 1437 aa9.35□□□□□ -0.91
CUL1-204ENST00000617797 CAMSAP2Q08AD1 1489 aa9.35□□□□□ -0.91
CUL1-204ENST00000617797 ACIN1Q9UKV3 1341 aaKnown RBP9.34□□□□□ -0.91
CUL1-204ENST00000617797 ATP10BO94823 1461 aa9.34□□□□□ -0.91
CUL1-204ENST00000617797 GPATCH8Q9UKJ3 1502 aaKnown RBP9.34□□□□□ -0.91
CUL1-204ENST00000617797 DCAF8L1A6NGE4 600 aa9.34□□□□□ -0.91
CUL1-204ENST00000617797 ROCK1Q13464 1354 aa9.34□□□□□ -0.91
CUL1-204ENST00000617797 ZNF644Q9H582 1327 aaPredicted RBP9.33□□□□□ -0.92
CUL1-204ENST00000617797 DENND4BO75064 1496 aaPredicted RBP9.33□□□□□ -0.92
CUL1-204ENST00000617797 CENPBP07199 599 aaPredicted RBP9.33□□□□□ -0.92
CUL1-204ENST00000617797 PPP1R15AO75807 674 aaPredicted RBP9.33□□□□□ -0.92
CUL1-204ENST00000617797 TPRNQ4KMQ1 711 aa9.33□□□□□ -0.92
CUL1-204ENST00000617797 TONSLQ96HA7 1378 aa9.32□□□□□ -0.92
CUL1-204ENST00000617797 U3KPZ7 1027 aaPredicted RBP9.32□□□□□ -0.92
CUL1-204ENST00000617797 ABCC10Q5T3U5 1492 aa9.31□□□□□ -0.92
CUL1-204ENST00000617797 PTPRGP23470 1445 aa9.31□□□□□ -0.92
CUL1-204ENST00000617797 SPDYE4A6NLX3 237 aa9.31□□□□□ -0.92
CUL1-204ENST00000617797 TRIM52Q96A61 297 aa9.31□□□□□ -0.92
CUL1-204ENST00000617797 ZNF219Q9P2Y4 722 aaPredicted RBP9.31□□□□□ -0.92
CUL1-204ENST00000617797 CFDP1Q9UEE9 299 aaPredicted RBP9.31□□□□□ -0.92
CUL1-204ENST00000617797 KDM5BQ9UGL1 1544 aa9.3□□□□□ -0.92
CUL1-204ENST00000617797 PLEKHD1A6NEE1 506 aa9.3□□□□□ -0.92
CUL1-204ENST00000617797 VASPP50552 380 aaPredicted RBP9.29□□□□□ -0.92
CUL1-204ENST00000617797 ERCC6L2Q5T890 1561 aa9.29□□□□□ -0.92
CUL1-204ENST00000617797 YTHDC1Q96MU7 727 aaKnown RBP9.29□□□□□ -0.92
CUL1-204ENST00000617797 ADGRL2O95490 1459 aa9.28□□□□□ -0.92
CUL1-204ENST00000617797 CDC42BPBQ9Y5S2 1711 aa9.28□□□□□ -0.92
CUL1-204ENST00000617797 MPHOSPH9Q99550 1183 aa9.28□□□□□ -0.92
CUL1-204ENST00000617797 PREX2Q70Z35 1606 aa9.27□□□□□ -0.93
CUL1-204ENST00000617797 ZNF777Q9ULD5 760 aaPredicted RBP9.27□□□□□ -0.93
CUL1-204ENST00000617797 CLASP1Q7Z460 1538 aa9.27□□□□□ -0.93
CUL1-204ENST00000617797 NCOA1Q15788 1441 aa9.26□□□□□ -0.93
CUL1-204ENST00000617797 VSIG10Q8N0Z9 540 aa9.26□□□□□ -0.93
CUL1-204ENST00000617797 IFNLR1Q8IU57 520 aaPredicted RBP9.25□□□□□ -0.93
CUL1-204ENST00000617797 ABCC2Q92887 1545 aa9.25□□□□□ -0.93
CUL1-204ENST00000617797 SHANK2Q9UPX8 1470 aa9.25□□□□□ -0.93
CUL1-204ENST00000617797 ARHGEF5Q12774 1597 aa9.24□□□□□ -0.93
CUL1-204ENST00000617797 PROM2Q8N271 834 aa9.24□□□□□ -0.93
CUL1-204ENST00000617797 SAMD9LQ8IVG5 1584 aa9.24□□□□□ -0.93
CUL1-204ENST00000617797 PZPP20742 1482 aa9.24□□□□□ -0.93
CUL1-204ENST00000617797 ANKRD30AQ9BXX3 1397 aa9.23□□□□□ -0.93
CUL1-204ENST00000617797 TTC37Q6PGP7 1564 aa9.23□□□□□ -0.93
CUL1-204ENST00000617797 MYO5CQ9NQX4 1742 aa9.23□□□□□ -0.93
CUL1-204ENST00000617797 HIRIP3Q9BW71 556 aaPredicted RBP9.23□□□□□ -0.93
CUL1-204ENST00000617797 ANKRD30BQ9BXX2 1392 aa9.22□□□□□ -0.93
CUL1-204ENST00000617797 C9orf84Q5VXU9 1444 aa9.22□□□□□ -0.93
CUL1-204ENST00000617797 ZCCHC11Q5TAX3 1644 aaKnown RBP9.22□□□□□ -0.93
CUL1-204ENST00000617797 RPRD2Q5VT52 1461 aaKnown RBP9.22□□□□□ -0.93
CUL1-204ENST00000617797 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.21□□□□□ -0.93
CUL1-204ENST00000617797 DDX10Q13206 875 aaKnown RBP9.21□□□□□ -0.94
CUL1-204ENST00000617797 PKD2Q13563 968 aa9.21□□□□□ -0.94
CUL1-204ENST00000617797 DAXXQ9UER7 740 aaPredicted RBP9.21□□□□□ -0.94
CUL1-204ENST00000617797 GTF3C3Q9Y5Q9 886 aa9.21□□□□□ -0.94
CUL1-204ENST00000617797 ANKRD50Q9ULJ7 1429 aa9.2□□□□□ -0.94
CUL1-204ENST00000617797 MBD5Q9P267 1494 aa9.2□□□□□ -0.94
CUL1-204ENST00000617797 TEX14Q8IWB6 1497 aa9.2□□□□□ -0.94
CUL1-204ENST00000617797 TULP1O00294 542 aaPredicted RBP9.2□□□□□ -0.94
CUL1-204ENST00000617797 CCDC141Q6ZP82 1450 aa9.19□□□□□ -0.94
CUL1-204ENST00000617797 ARHGAP5Q13017 1502 aa9.19□□□□□ -0.94
CUL1-204ENST00000617797 HNRNPMP52272 730 aaKnown RBP eCLIP9.19□□□□□ -0.946e-9■■■■■ 30.1
CUL1-204ENST00000617797 MKRN4PQ13434 485 aaPredicted RBP9.19□□□□□ -0.94
CUL1-204ENST00000617797 SYCP2Q9BX26 1530 aa9.18□□□□□ -0.94
CUL1-204ENST00000617797 KDM5DQ9BY66 1539 aa9.18□□□□□ -0.94
CUL1-204ENST00000617797 KIAA1107Q9UPP5 1409 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms