RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 ITSN2Q9NZM3 1697 aa30.99■■■□□ 2.55
SDHA-220ENST00000617470 ARHGAP5Q13017 1502 aa30.99■■■□□ 2.55
SDHA-220ENST00000617470 TSPOAP1O95153 1857 aa30.97■■■□□ 2.55
SDHA-220ENST00000617470 PREX2Q70Z35 1606 aa30.97■■■□□ 2.55
SDHA-220ENST00000617470 RRBP1Q9P2E9 1410 aaKnown RBP30.97■■■□□ 2.55
SDHA-220ENST00000617470 CDC42BPBQ9Y5S2 1711 aa30.95■■■□□ 2.54
SDHA-220ENST00000617470 EFCAB2Q5VUJ9 269 aa30.94■■■□□ 2.54
SDHA-220ENST00000617470 FGD6Q6ZV73 1430 aa30.93■■■□□ 2.54
SDHA-220ENST00000617470 FANCAO15360 1455 aa30.91■■■□□ 2.54
SDHA-220ENST00000617470 MIA2Q96PC5 1412 aa30.89■■■□□ 2.54
SDHA-220ENST00000617470 ARAP3Q8WWN8 1544 aa30.89■■■□□ 2.54
SDHA-220ENST00000617470 ZNF644Q9H582 1327 aaPredicted RBP30.89■■■□□ 2.53
SDHA-220ENST00000617470 FAM50AQ14320 339 aaKnown RBP30.88■■■□□ 2.53
SDHA-220ENST00000617470 ZEB1P37275 1124 aaPredicted RBP30.87■■■□□ 2.53
SDHA-220ENST00000617470 TEX14Q8IWB6 1497 aa30.85■■■□□ 2.53
SDHA-220ENST00000617470 PPRC1Q5VV67 1664 aaKnown RBP30.85■■■□□ 2.53
SDHA-220ENST00000617470 PTPN23Q9H3S7 1636 aa30.84■■■□□ 2.53
SDHA-220ENST00000617470 CAMSAP2Q08AD1 1489 aa30.81■■■□□ 2.52
SDHA-220ENST00000617470 AKNAQ7Z591 1439 aa30.81■■■□□ 2.52
SDHA-220ENST00000617470 SAMD9LQ8IVG5 1584 aa30.81■■■□□ 2.52
SDHA-220ENST00000617470 CFAP74Q9C0B2 1584 aa30.81■■■□□ 2.52
SDHA-220ENST00000617470 NEO1Q92859 1461 aa30.79■■■□□ 2.52
SDHA-220ENST00000617470 ADGRL1O94910 1474 aa30.77■■■□□ 2.52
SDHA-220ENST00000617470 HNRNPMP52272 730 aaKnown RBP eCLIP30.77■■■□□ 2.52
SDHA-220ENST00000617470 CCER1Q8TC90 406 aaPredicted RBP30.77■■■□□ 2.52
SDHA-220ENST00000617470 TCOF1Q13428 1488 aaKnown RBP30.75■■■□□ 2.51
SDHA-220ENST00000617470 PLEKHH2Q8IVE3 1493 aa30.74■■■□□ 2.51
SDHA-220ENST00000617470 SCAPERQ9BY12 1400 aa30.73■■■□□ 2.51
SDHA-220ENST00000617470 SYCP2Q9BX26 1530 aa30.73■■■□□ 2.51
SDHA-220ENST00000617470 ABCC1P33527 1531 aa30.72■■■□□ 2.51
SDHA-220ENST00000617470 ITGAEP38570 1179 aa30.72■■■□□ 2.51
SDHA-220ENST00000617470 ARHGEF12Q9NZN5 1544 aa30.69■■■□□ 2.5
SDHA-220ENST00000617470 KIAA1107Q9UPP5 1409 aa30.69■■■□□ 2.5
SDHA-220ENST00000617470 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.66■■■□□ 2.5
SDHA-220ENST00000617470 MBD5Q9P267 1494 aa30.64■■■□□ 2.5
SDHA-220ENST00000617470 RAPGEF3O95398 923 aa30.64■■■□□ 2.5
SDHA-220ENST00000617470 TRAPPC8Q9Y2L5 1435 aa30.64■■■□□ 2.49
SDHA-220ENST00000617470 DENND4BO75064 1496 aaPredicted RBP30.64■■■□□ 2.49
SDHA-220ENST00000617470 AFAP1Q8N556 730 aa30.63■■■□□ 2.49
SDHA-220ENST00000617470 RSPH4AQ5TD94 716 aa30.6■■■□□ 2.49
SDHA-220ENST00000617470 CCDC141Q6ZP82 1450 aa30.6■■■□□ 2.49
SDHA-220ENST00000617470 DAPK1P53355 1430 aa30.59■■■□□ 2.49
SDHA-220ENST00000617470 POGZQ7Z3K3 1410 aa30.59■■■□□ 2.49
SDHA-220ENST00000617470 ARHGEF5Q12774 1597 aa30.59■■■□□ 2.49
SDHA-220ENST00000617470 TSPY4P0CV99 314 aa30.58■■■□□ 2.49
SDHA-220ENST00000617470 TSPY10P0CW01 314 aa30.58■■■□□ 2.49
SDHA-220ENST00000617470 ABCC5O15440 1437 aa30.58■■■□□ 2.49
SDHA-220ENST00000617470 DNMT1P26358 1616 aaKnown RBP30.58■■■□□ 2.49
SDHA-220ENST00000617470 COL17A1Q9UMD9 1497 aaPredicted RBP30.57■■■□□ 2.49
SDHA-220ENST00000617470 MYT1LQ9UL68 1186 aa30.57■■■□□ 2.48
SDHA-220ENST00000617470 ZNF518AQ6AHZ1 1483 aa30.57■■■□□ 2.48
SDHA-220ENST00000617470 CHIC2Q9UKJ5 165 aa30.57■■■□□ 2.48
SDHA-220ENST00000617470 KDM6BO15054 1643 aa30.53■■■□□ 2.48
SDHA-220ENST00000617470 SPAG9O60271 1321 aaKnown RBP30.53■■■□□ 2.48
SDHA-220ENST00000617470 RICTORQ6R327 1708 aa30.51■■■□□ 2.47
SDHA-220ENST00000617470 PTPRKQ15262 1439 aa30.5■■■□□ 2.47
SDHA-220ENST00000617470 FRMPD1Q5SYB0 1578 aa30.49■■■□□ 2.47
SDHA-220ENST00000617470 C9orf84Q5VXU9 1444 aa30.49■■■□□ 2.47
SDHA-220ENST00000617470 CROCC2H7BZ55 1655 aa30.48■■■□□ 2.47
SDHA-220ENST00000617470 KDM5CP41229 1560 aa30.46■■■□□ 2.47
SDHA-220ENST00000617470 SHANK2Q9UPX8 1470 aa30.45■■■□□ 2.46
SDHA-220ENST00000617470 HECW2Q9P2P5 1572 aa30.41■■■□□ 2.46
SDHA-220ENST00000617470 ATP7AQ04656 1500 aa30.4■■■□□ 2.46
SDHA-220ENST00000617470 RRP7BPQ9NSQ0 103 aa30.4■■■□□ 2.46
SDHA-220ENST00000617470 ZFYVE16Q7Z3T8 1539 aa30.39■■■□□ 2.46
SDHA-220ENST00000617470 MAST1Q9Y2H9 1570 aa30.39■■■□□ 2.46
SDHA-220ENST00000617470 ANKRD30AQ9BXX3 1397 aa30.39■■■□□ 2.45
SDHA-220ENST00000617470 MLH3Q9UHC1 1453 aa30.39■■■□□ 2.45
SDHA-220ENST00000617470 RTEL1-TNFRSF6BF6WH68 1400 aa30.38■■■□□ 2.45
SDHA-220ENST00000617470 ZMYM4Q5VZL5 1548 aa30.38■■■□□ 2.45
SDHA-220ENST00000617470 INO80Q9ULG1 1556 aaPredicted RBP30.37■■■□□ 2.45
SDHA-220ENST00000617470 DHX57Q6P158 1386 aaKnown RBP30.36■■■□□ 2.45
SDHA-220ENST00000617470 KIDINS220Q9ULH0 1771 aa30.36■■■□□ 2.45
SDHA-220ENST00000617470 ADGBQ8N7X0 1667 aa30.35■■■□□ 2.45
SDHA-220ENST00000617470 NCOA1Q15788 1441 aa30.34■■■□□ 2.45
SDHA-220ENST00000617470 YEATS2Q9ULM3 1422 aa30.34■■■□□ 2.45
SDHA-220ENST00000617470 ROCK1Q13464 1354 aa30.33■■■□□ 2.45
SDHA-220ENST00000617470 ADGRL2O95490 1459 aa30.33■■■□□ 2.45
SDHA-220ENST00000617470 MAGI2Q86UL8 1455 aa30.33■■■□□ 2.45
SDHA-220ENST00000617470 KIF15Q9NS87 1388 aa30.32■■■□□ 2.44
SDHA-220ENST00000617470 RAB3GAP2Q9H2M9 1393 aa30.31■■■□□ 2.44
SDHA-220ENST00000617470 SETD5Q9C0A6 1442 aa30.3■■■□□ 2.44
SDHA-220ENST00000617470 PLXNC1O60486 1568 aa30.28■■■□□ 2.44
SDHA-220ENST00000617470 ABCA6Q8N139 1617 aa30.28■■■□□ 2.44
SDHA-220ENST00000617470 DIP2CQ9Y2E4 1556 aa30.25■■■□□ 2.43
SDHA-220ENST00000617470 HFM1A2PYH4 1435 aa30.23■■■□□ 2.43
SDHA-220ENST00000617470 ARHGEF40Q8TER5 1519 aa30.23■■■□□ 2.43
SDHA-220ENST00000617470 NAIPQ13075 1403 aa30.23■■■□□ 2.43
SDHA-220ENST00000617470 ATP10AO60312 1499 aa30.21■■■□□ 2.43
SDHA-220ENST00000617470 A2MP01023 1474 aa30.21■■■□□ 2.43
SDHA-220ENST00000617470 DUOX2Q9NRD8 1548 aa30.2■■■□□ 2.43
SDHA-220ENST00000617470 CLSPNQ9HAW4 1339 aa30.19■■■□□ 2.42
SDHA-220ENST00000617470 DHX29Q7Z478 1369 aaKnown RBP30.19■■■□□ 2.42
SDHA-220ENST00000617470 ANKRD50Q9ULJ7 1429 aa30.18■■■□□ 2.42
SDHA-220ENST00000617470 GCC2Q8IWJ2 1684 aa30.16■■■□□ 2.42
SDHA-220ENST00000617470 ERBINQ96RT1 1412 aa30.12■■■□□ 2.41
SDHA-220ENST00000617470 KIF3BO15066 747 aa30.12■■■□□ 2.41
SDHA-220ENST00000617470 ARID4BQ4LE39 1312 aaPredicted RBP30.11■■■□□ 2.41
SDHA-220ENST00000617470 REREQ9P2R6 1566 aa30.07■■■□□ 2.4
SDHA-220ENST00000617470 GGT6Q6P531 493 aa30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 891.6 ms