RNA–Protein interactions for RNA: ENST00000616923.4

GCLC-213, Transcript of glutamate-cysteine ligase catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene GCLC, Length 3,694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCLC-213ENST00000616923 RCAN3Q9UKA8 241 aa21.22■□□□□ 0.99
GCLC-213ENST00000616923 FRAT2O75474 233 aaPredicted RBP21.21■□□□□ 0.99
GCLC-213ENST00000616923 PKNOX2Q96KN3 472 aa21.2■□□□□ 0.99
GCLC-213ENST00000616923 UACAQ9BZF9 1416 aa21.2■□□□□ 0.98
GCLC-213ENST00000616923 NBPF8Q3BBV2 869 aa21.19■□□□□ 0.98
GCLC-213ENST00000616923 AQRO60306 1485 aaKnown RBP eCLIP21.18■□□□□ 0.98
GCLC-213ENST00000616923 FANCD2Q9BXW9 1451 aa21.18■□□□□ 0.98
GCLC-213ENST00000616923 NESP48681 1621 aa21.17■□□□□ 0.98
GCLC-213ENST00000616923 VSIG10Q8N0Z9 540 aa21.16■□□□□ 0.98
GCLC-213ENST00000616923 RGS3P49796 1198 aa21.16■□□□□ 0.98
GCLC-213ENST00000616923 MPHOSPH9Q99550 1183 aa21.15■□□□□ 0.98
GCLC-213ENST00000616923 RSPH6AQ9H0K4 717 aa21.15■□□□□ 0.98
GCLC-213ENST00000616923 ZNF777Q9ULD5 760 aaPredicted RBP21.14■□□□□ 0.97
GCLC-213ENST00000616923 PTPRKQ15262 1439 aa21.12■□□□□ 0.97
GCLC-213ENST00000616923 NAP1L5Q96NT1 182 aaPredicted RBP21.12■□□□□ 0.97
GCLC-213ENST00000616923 CDCA7LQ96GN5 454 aa21.11■□□□□ 0.97
GCLC-213ENST00000616923 ARID4BQ4LE39 1312 aaPredicted RBP21.1■□□□□ 0.97
GCLC-213ENST00000616923 HMGXB3Q12766 1538 aa21.1■□□□□ 0.97
GCLC-213ENST00000616923 DCAF11Q8TEB1 546 aa21.1■□□□□ 0.97
GCLC-213ENST00000616923 GLIPR1L2Q4G1C9 344 aa21.09■□□□□ 0.97
GCLC-213ENST00000616923 FMN1Q68DA7 1419 aa21.09■□□□□ 0.97
GCLC-213ENST00000616923 FGD6Q6ZV73 1430 aa21.09■□□□□ 0.97
GCLC-213ENST00000616923 PNISRQ8TF01 805 aaKnown RBP21.08■□□□□ 0.97
GCLC-213ENST00000616923 CRBNQ96SW2 442 aa21.08■□□□□ 0.97
GCLC-213ENST00000616923 SLC4A1APQ9BWU0 796 aaKnown RBP21.07■□□□□ 0.96
GCLC-213ENST00000616923 MS4A1P11836 297 aa21.07■□□□□ 0.96
GCLC-213ENST00000616923 RNF123Q5XPI4 1314 aa21.06■□□□□ 0.96
GCLC-213ENST00000616923 NCOA1Q15788 1441 aa21.05■□□□□ 0.96
GCLC-213ENST00000616923 SLKQ9H2G2 1235 aaPredicted RBP21.05■□□□□ 0.96
GCLC-213ENST00000616923 NAIPQ13075 1403 aa21.03■□□□□ 0.96
GCLC-213ENST00000616923 KDM2AQ9Y2K7 1162 aa21.03■□□□□ 0.96
GCLC-213ENST00000616923 HFM1A2PYH4 1435 aa21.02■□□□□ 0.96
GCLC-213ENST00000616923 FAM43AQ8N2R8 423 aa21.01■□□□□ 0.95
GCLC-213ENST00000616923 NCOA2Q15596 1464 aa21■□□□□ 0.95
GCLC-213ENST00000616923 POGKQ9P215 609 aa20.99■□□□□ 0.95
GCLC-213ENST00000616923 CC2D2AQ9P2K1 1620 aa20.99■□□□□ 0.95
GCLC-213ENST00000616923 GZF1Q9H116 711 aaPredicted RBP20.98■□□□□ 0.95
GCLC-213ENST00000616923 C20orf194Q5TEA3 1177 aa20.96■□□□□ 0.95
GCLC-213ENST00000616923 SPRYD3Q8NCJ5 442 aa20.96■□□□□ 0.95
GCLC-213ENST00000616923 BIVM-ERCC5R4GMW8 1640 aa20.96■□□□□ 0.95
GCLC-213ENST00000616923 PCF11O94913 1555 aaKnown RBP20.95■□□□□ 0.95
GCLC-213ENST00000616923 ZMYND15Q9H091 742 aa20.95■□□□□ 0.94
GCLC-213ENST00000616923 RRAGDQ9NQL2 400 aaPredicted RBP20.93■□□□□ 0.94
GCLC-213ENST00000616923 CC2D1BQ5T0F9 858 aaKnown RBP20.92■□□□□ 0.94
GCLC-213ENST00000616923 CARD11Q9BXL7 1154 aa20.91■□□□□ 0.94
GCLC-213ENST00000616923 MAP3K1Q13233 1512 aa20.91■□□□□ 0.94
GCLC-213ENST00000616923 HSP90AA2PQ14568 343 aaPredicted RBP20.91■□□□□ 0.94
GCLC-213ENST00000616923 PTPN23Q9H3S7 1636 aa20.9■□□□□ 0.94
GCLC-213ENST00000616923 PNNQ9H307 717 aaKnown RBP20.9■□□□□ 0.94
GCLC-213ENST00000616923 POLA1P09884 1462 aaPredicted RBP20.89■□□□□ 0.94
GCLC-213ENST00000616923 FAM161AQ3B820 660 aa20.89■□□□□ 0.94
GCLC-213ENST00000616923 CHMP7Q8WUX9 453 aaPredicted RBP20.89■□□□□ 0.93
GCLC-213ENST00000616923 KDM5BQ9UGL1 1544 aa20.88■□□□□ 0.93
GCLC-213ENST00000616923 USP47Q96K76 1375 aa20.88■□□□□ 0.93
GCLC-213ENST00000616923 HSP90AA1P07900 732 aaKnown RBP20.86■□□□□ 0.93
GCLC-213ENST00000616923 DHX29Q7Z478 1369 aaKnown RBP20.86■□□□□ 0.93
GCLC-213ENST00000616923 TOPBP1Q92547 1522 aa20.85■□□□□ 0.93
GCLC-213ENST00000616923 PDS5BQ9NTI5 1447 aa20.84■□□□□ 0.93
GCLC-213ENST00000616923 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.83■□□□□ 0.93
GCLC-213ENST00000616923 ST20-MTHFSA0A0A6YYL1 179 aa20.83■□□□□ 0.93
GCLC-213ENST00000616923 MYBBP1AQ9BQG0 1328 aaKnown RBP20.83■□□□□ 0.92
GCLC-213ENST00000616923 MYOM3Q5VTT5 1437 aa20.8■□□□□ 0.92
GCLC-213ENST00000616923 GAPVD1Q14C86 1478 aa20.79■□□□□ 0.92
GCLC-213ENST00000616923 CASKIN1Q8WXD9 1431 aa20.78■□□□□ 0.92
GCLC-213ENST00000616923 C8orf34Q49A92 452 aa20.78■□□□□ 0.92
GCLC-213ENST00000616923 L1TD1Q5T7N2 865 aaKnown RBP20.77■□□□□ 0.92
GCLC-213ENST00000616923 CENPQQ7L2Z9 268 aaPredicted RBP20.76■□□□□ 0.91
GCLC-213ENST00000616923 KIF15Q9NS87 1388 aa20.76■□□□□ 0.91
GCLC-213ENST00000616923 PDE3BQ13370 1112 aa20.75■□□□□ 0.91
GCLC-213ENST00000616923 NLRP13Q86W25 1043 aa20.75■□□□□ 0.91
GCLC-213ENST00000616923 PANK2Q9BZ23 570 aa20.75■□□□□ 0.91
GCLC-213ENST00000616923 RALBP1Q15311 655 aa20.75■□□□□ 0.91
GCLC-213ENST00000616923 BECN1Q14457 450 aa20.74■□□□□ 0.91
GCLC-213ENST00000616923 FYCO1Q9BQS8 1478 aa20.74■□□□□ 0.91
GCLC-213ENST00000616923 KTN1Q86UP2 1357 aaKnown RBP20.74■□□□□ 0.91
GCLC-213ENST00000616923 SENP3Q9H4L4 574 aaPredicted RBP20.74■□□□□ 0.91
GCLC-213ENST00000616923 GOLGA6L3A6NEY3 463 aa20.73■□□□□ 0.91
GCLC-213ENST00000616923 ZNF644Q9H582 1327 aaPredicted RBP20.73■□□□□ 0.91
GCLC-213ENST00000616923 CFDP1Q9UEE9 299 aaPredicted RBP20.73■□□□□ 0.91
GCLC-213ENST00000616923 PKD2Q13563 968 aa20.72■□□□□ 0.91
GCLC-213ENST00000616923 CANXP27824 592 aaKnown RBP20.71■□□□□ 0.91
GCLC-213ENST00000616923 ANKRD30BQ9BXX2 1392 aa20.7■□□□□ 0.9
GCLC-213ENST00000616923 ARID3AQ99856 593 aa20.69■□□□□ 0.9
GCLC-213ENST00000616923 SPATA31E1Q6ZUB1 1445 aa20.69■□□□□ 0.9
GCLC-213ENST00000616923 BRD4O60885 1362 aaPredicted RBP20.69■□□□□ 0.9
GCLC-213ENST00000616923 DENND4BO75064 1496 aaPredicted RBP20.68■□□□□ 0.9
GCLC-213ENST00000616923 RGL3Q3MIN7 710 aa20.68■□□□□ 0.9
GCLC-213ENST00000616923 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.67■□□□□ 0.94e-6■■□□□ 11.5
GCLC-213ENST00000616923 CFAP43Q8NDM7 1665 aa20.67■□□□□ 0.9
GCLC-213ENST00000616923 SEC24BO95487 1268 aa20.67■□□□□ 0.9
GCLC-213ENST00000616923 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.67■□□□□ 0.9
GCLC-213ENST00000616923 XRCC6P12956 609 aaKnown RBP eCLIP20.66■□□□□ 0.9
GCLC-213ENST00000616923 ABCA10Q8WWZ4 1543 aa20.66■□□□□ 0.9
GCLC-213ENST00000616923 DNMBPQ6XZF7 1577 aa20.65■□□□□ 0.9
GCLC-213ENST00000616923 URB2Q14146 1524 aaKnown RBP20.64■□□□□ 0.9
GCLC-213ENST00000616923 WDR43Q15061 677 aaKnown RBP eCLIP20.64■□□□□ 0.9
GCLC-213ENST00000616923 UPF2Q9HAU5 1272 aaKnown RBP20.64■□□□□ 0.89
GCLC-213ENST00000616923 KDM6BO15054 1643 aa20.63■□□□□ 0.89
GCLC-213ENST00000616923 TRIM44Q96DX7 344 aaPredicted RBP20.63■□□□□ 0.89
GCLC-213ENST00000616923 ADAMTS8Q9UP79 889 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms