RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 L1TD1Q5T7N2 865 aaKnown RBP18.18■□□□□ 0.5
TNFRSF11A-205ENST00000616710 ZNF777Q9ULD5 760 aaPredicted RBP18.18■□□□□ 0.5
TNFRSF11A-205ENST00000616710 CCDC7Q96M83 1385 aa18.18■□□□□ 0.5
TNFRSF11A-205ENST00000616710 CNTLNQ9NXG0 1405 aa18.18■□□□□ 0.5
TNFRSF11A-205ENST00000616710 GOLGA6L3A6NEY3 463 aa18.17■□□□□ 0.5
TNFRSF11A-205ENST00000616710 RRAGDQ9NQL2 400 aaPredicted RBP18.16■□□□□ 0.5
TNFRSF11A-205ENST00000616710 MS4A1P11836 297 aa18.16■□□□□ 0.5
TNFRSF11A-205ENST00000616710 CARD11Q9BXL7 1154 aa18.14■□□□□ 0.49
TNFRSF11A-205ENST00000616710 MPHOSPH9Q99550 1183 aa18.14■□□□□ 0.49
TNFRSF11A-205ENST00000616710 FAM161AQ3B820 660 aa18.13■□□□□ 0.49
TNFRSF11A-205ENST00000616710 TOP2AP11388 1531 aaKnown RBP18.13■□□□□ 0.49
TNFRSF11A-205ENST00000616710 ANP32BQ92688 251 aaKnown RBP18.12■□□□□ 0.49
TNFRSF11A-205ENST00000616710 SMARCA2P51531 1590 aa18.11■□□□□ 0.49
TNFRSF11A-205ENST00000616710 NBPF8Q3BBV2 869 aa18.11■□□□□ 0.49
TNFRSF11A-205ENST00000616710 C20orf194Q5TEA3 1177 aa18.11■□□□□ 0.49
TNFRSF11A-205ENST00000616710 SMG6Q86US8 1419 aaKnown RBP18.09■□□□□ 0.49
TNFRSF11A-205ENST00000616710 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.09■□□□□ 0.49
TNFRSF11A-205ENST00000616710 RBM10P98175 930 aaKnown RBP18.09■□□□□ 0.49
TNFRSF11A-205ENST00000616710 MYH16Q9H6N6 1097 aa18.09■□□□□ 0.49
TNFRSF11A-205ENST00000616710 PANK2Q9BZ23 570 aa18.09■□□□□ 0.49
TNFRSF11A-205ENST00000616710 KIF27Q86VH2 1401 aa18.08■□□□□ 0.48
TNFRSF11A-205ENST00000616710 CCDC18Q5T9S5 1454 aa18.07■□□□□ 0.48
TNFRSF11A-205ENST00000616710 NEUROD2Q15784 382 aa18.07■□□□□ 0.48
TNFRSF11A-205ENST00000616710 WDR43Q15061 677 aaKnown RBP eCLIP18.07■□□□□ 0.48
TNFRSF11A-205ENST00000616710 RGL3Q3MIN7 710 aa18.07■□□□□ 0.48
TNFRSF11A-205ENST00000616710 PNISRQ8TF01 805 aaKnown RBP18.07■□□□□ 0.48
TNFRSF11A-205ENST00000616710 NCLP19338 710 aaKnown RBP18.06■□□□□ 0.48
TNFRSF11A-205ENST00000616710 FBLN2P98095 1184 aa18.06■□□□□ 0.48
TNFRSF11A-205ENST00000616710 ARHGAP35Q9NRY4 1499 aa18.06■□□□□ 0.48
TNFRSF11A-205ENST00000616710 SYNJ1O43426 1573 aa18.06■□□□□ 0.48
TNFRSF11A-205ENST00000616710 FAM13BQ9NYF5 915 aa18.06■□□□□ 0.48
TNFRSF11A-205ENST00000616710 FOXD4L1Q9NU39 408 aa18.04■□□□□ 0.48
TNFRSF11A-205ENST00000616710 SMARCA4P51532 1647 aa18.03■□□□□ 0.48
TNFRSF11A-205ENST00000616710 FHAD1B1AJZ9 1412 aa18.03■□□□□ 0.48
TNFRSF11A-205ENST00000616710 TPRNQ4KMQ1 711 aa18.01■□□□□ 0.47
TNFRSF11A-205ENST00000616710 FHOD3Q2V2M9 1422 aa18■□□□□ 0.47
TNFRSF11A-205ENST00000616710 ST20-MTHFSA0A0A6YYL1 179 aa17.98■□□□□ 0.47
TNFRSF11A-205ENST00000616710 CCDC146Q8IYE0 955 aa17.97■□□□□ 0.47
TNFRSF11A-205ENST00000616710 CENPQQ7L2Z9 268 aaPredicted RBP17.97■□□□□ 0.47
TNFRSF11A-205ENST00000616710 RRP9O43818 475 aaKnown RBP17.96■□□□□ 0.47
TNFRSF11A-205ENST00000616710 FMN1Q68DA7 1419 aa17.96■□□□□ 0.47
TNFRSF11A-205ENST00000616710 MFAP1P55081 439 aaKnown RBP17.95■□□□□ 0.46
TNFRSF11A-205ENST00000616710 LRRC9Q6ZRR7 1453 aa17.94■□□□□ 0.46
TNFRSF11A-205ENST00000616710 CLUAP1Q96AJ1 413 aa17.94■□□□□ 0.46
TNFRSF11A-205ENST00000616710 MSNP26038 577 aaKnown RBP17.93■□□□□ 0.46
TNFRSF11A-205ENST00000616710 XRCC6P12956 609 aaKnown RBP eCLIP17.93■□□□□ 0.46
TNFRSF11A-205ENST00000616710 CARMIL1Q5VZK9 1371 aa17.92■□□□□ 0.46
TNFRSF11A-205ENST00000616710 UACAQ9BZF9 1416 aa17.92■□□□□ 0.46
TNFRSF11A-205ENST00000616710 DNTTIP2Q5QJE6 756 aaKnown RBP17.92■□□□□ 0.46
TNFRSF11A-205ENST00000616710 NLRP13Q86W25 1043 aa17.91■□□□□ 0.46
TNFRSF11A-205ENST00000616710 PRDM10Q9NQV6 1147 aa17.91■□□□□ 0.46
TNFRSF11A-205ENST00000616710 KTN1Q86UP2 1357 aaKnown RBP17.91■□□□□ 0.46
TNFRSF11A-205ENST00000616710 MYBBP1AQ9BQG0 1328 aaKnown RBP17.9■□□□□ 0.46
TNFRSF11A-205ENST00000616710 COG6Q9Y2V7 657 aa17.9■□□□□ 0.46
TNFRSF11A-205ENST00000616710 BCL2L13Q9BXK5 485 aa17.9■□□□□ 0.46
TNFRSF11A-205ENST00000616710 USP47Q96K76 1375 aa17.9■□□□□ 0.46
TNFRSF11A-205ENST00000616710 CUX2O14529 1486 aa17.89■□□□□ 0.45
TNFRSF11A-205ENST00000616710 ESPNB1AK53 854 aa17.89■□□□□ 0.45
TNFRSF11A-205ENST00000616710 TRAK2O60296 914 aa17.89■□□□□ 0.45
TNFRSF11A-205ENST00000616710 EIF4G1Q04637 1599 aaKnown RBP17.89■□□□□ 0.45
TNFRSF11A-205ENST00000616710 KIAA1211Q6ZU35 1233 aa17.87■□□□□ 0.45
TNFRSF11A-205ENST00000616710 PDE3BQ13370 1112 aa17.86■□□□□ 0.45
TNFRSF11A-205ENST00000616710 PKD2Q13563 968 aa17.86■□□□□ 0.45
TNFRSF11A-205ENST00000616710 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.86■□□□□ 0.45
TNFRSF11A-205ENST00000616710 R3HCC1Q9Y3T6 440 aaKnown RBP17.86■□□□□ 0.45
TNFRSF11A-205ENST00000616710 RALBP1Q15311 655 aa17.85■□□□□ 0.45
TNFRSF11A-205ENST00000616710 SEC24BO95487 1268 aa17.85■□□□□ 0.45
TNFRSF11A-205ENST00000616710 HSP90AB1P08238 724 aaKnown RBP17.85■□□□□ 0.45
TNFRSF11A-205ENST00000616710 TNNT2P45379 298 aaPredicted RBP17.85■□□□□ 0.45
TNFRSF11A-205ENST00000616710 C8orf34Q49A92 452 aa17.85■□□□□ 0.45
TNFRSF11A-205ENST00000616710 ZHX1Q9UKY1 873 aaPredicted RBP17.85■□□□□ 0.45
TNFRSF11A-205ENST00000616710 AQRO60306 1485 aaKnown RBP eCLIP17.84■□□□□ 0.45
TNFRSF11A-205ENST00000616710 HSCBQ8IWL3 235 aa17.83■□□□□ 0.45
TNFRSF11A-205ENST00000616710 BCAR3O75815 825 aa17.82■□□□□ 0.44
TNFRSF11A-205ENST00000616710 PANK1Q8TE04 598 aa17.82■□□□□ 0.44
TNFRSF11A-205ENST00000616710 PTMAP06454 111 aaKnown RBP17.82■□□□□ 0.44
TNFRSF11A-205ENST00000616710 GOLGA2Q08379 1002 aa17.81■□□□□ 0.44
TNFRSF11A-205ENST00000616710 FGD6Q6ZV73 1430 aa17.81■□□□□ 0.44
TNFRSF11A-205ENST00000616710 PRXQ9BXM0 1461 aa17.8■□□□□ 0.44
TNFRSF11A-205ENST00000616710 KIF15Q9NS87 1388 aa17.8■□□□□ 0.44
TNFRSF11A-205ENST00000616710 ADAMTS8Q9UP79 889 aa17.8■□□□□ 0.44
TNFRSF11A-205ENST00000616710 RNF123Q5XPI4 1314 aa17.8■□□□□ 0.44
TNFRSF11A-205ENST00000616710 ATAD2BQ9ULI0 1458 aa17.8■□□□□ 0.44
TNFRSF11A-205ENST00000616710 GRPEL1Q9HAV7 217 aa17.8■□□□□ 0.44
TNFRSF11A-205ENST00000616710 MCM4P33991 863 aa17.79■□□□□ 0.44
TNFRSF11A-205ENST00000616710 MRE11P49959 708 aa17.79■□□□□ 0.44
TNFRSF11A-205ENST00000616710 NCOA1Q15788 1441 aa17.79■□□□□ 0.44
TNFRSF11A-205ENST00000616710 CLCN1P35523 988 aa17.79■□□□□ 0.44
TNFRSF11A-205ENST00000616710 MPNDQ8N594 471 aa17.79■□□□□ 0.44
TNFRSF11A-205ENST00000616710 KNSTRNQ9Y448 316 aa17.78■□□□□ 0.44
TNFRSF11A-205ENST00000616710 MAPK8IP2Q13387 824 aaPredicted RBP17.77■□□□□ 0.44
TNFRSF11A-205ENST00000616710 PANK3Q9H999 370 aa17.76■□□□□ 0.43
TNFRSF11A-205ENST00000616710 PLCB2Q00722 1185 aa17.76■□□□□ 0.43
TNFRSF11A-205ENST00000616710 RRP7AQ9Y3A4 280 aaKnown RBP17.75■□□□□ 0.43
TNFRSF11A-205ENST00000616710 PTPRKQ15262 1439 aa17.75■□□□□ 0.43
TNFRSF11A-205ENST00000616710 GOLGA6L22H0YM25 854 aa17.75■□□□□ 0.43
TNFRSF11A-205ENST00000616710 APAF1O14727 1248 aa17.74■□□□□ 0.43
TNFRSF11A-205ENST00000616710 TBC1D2Q9BYX2 928 aa17.74■□□□□ 0.43
TNFRSF11A-205ENST00000616710 TIAM1Q13009 1591 aa17.73■□□□□ 0.43
TNFRSF11A-205ENST00000616710 FOXD4L5Q5VV16 416 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms