RNA–Protein interactions for RNA: ENST00000616646.4

DDX52-212, Transcript of DExD-box helicase 52, humanhuman

TSL 5

Gene DDX52, Length 2,951 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52-212ENST00000616646 KIF7Q2M1P5 1343 aa11.33□□□□□ -0.6
DDX52-212ENST00000616646 SLC4A3P48751 1232 aa11.33□□□□□ -0.6
DDX52-212ENST00000616646 CFAP44Q96MT7 982 aa11.32□□□□□ -0.6
DDX52-212ENST00000616646 RAD54L2Q9Y4B4 1467 aa11.32□□□□□ -0.6
DDX52-212ENST00000616646 BIVM-ERCC5R4GMW8 1640 aa11.32□□□□□ -0.6
DDX52-212ENST00000616646 ZBED9Q6R2W3 1325 aa11.31□□□□□ -0.6
DDX52-212ENST00000616646 IPO9Q96P70 1041 aaKnown RBP11.31□□□□□ -0.6
DDX52-212ENST00000616646 CCDC7Q96M83 1385 aa11.31□□□□□ -0.6
DDX52-212ENST00000616646 NAIPQ13075 1403 aa11.3□□□□□ -0.6
DDX52-212ENST00000616646 EXOC6Q8TAG9 804 aa11.3□□□□□ -0.6
DDX52-212ENST00000616646 FHAD1B1AJZ9 1412 aa11.3□□□□□ -0.6
DDX52-212ENST00000616646 PLIN1O60240 522 aa11.3□□□□□ -0.6
DDX52-212ENST00000616646 UACAQ9BZF9 1416 aa11.3□□□□□ -0.6
DDX52-212ENST00000616646 PAXIP1Q6ZW49 1069 aaPredicted RBP11.29□□□□□ -0.6
DDX52-212ENST00000616646 FGD5Q6ZNL6 1462 aa11.29□□□□□ -0.6
DDX52-212ENST00000616646 ZNF644Q9H582 1327 aaPredicted RBP11.29□□□□□ -0.6
DDX52-212ENST00000616646 NEFMP07197 916 aa11.29□□□□□ -0.6
DDX52-212ENST00000616646 CNTLNQ9NXG0 1405 aa11.28□□□□□ -0.6
DDX52-212ENST00000616646 FBXO3Q9UK99 471 aa11.27□□□□□ -0.61
DDX52-212ENST00000616646 TMC1Q8TDI8 760 aa11.27□□□□□ -0.61
DDX52-212ENST00000616646 CFTRP13569 1480 aa11.26□□□□□ -0.61
DDX52-212ENST00000616646 NUDCQ9Y266 331 aa11.26□□□□□ -0.61
DDX52-212ENST00000616646 TDRD9Q8NDG6 1382 aaKnown RBP11.26□□□□□ -0.61
DDX52-212ENST00000616646 HFM1A2PYH4 1435 aa11.25□□□□□ -0.61
DDX52-212ENST00000616646 ZNF777Q9ULD5 760 aaPredicted RBP11.25□□□□□ -0.61
DDX52-212ENST00000616646 KDM5BQ9UGL1 1544 aa11.24□□□□□ -0.61
DDX52-212ENST00000616646 BRPF3Q9ULD4 1205 aa11.24□□□□□ -0.61
DDX52-212ENST00000616646 CDCA7LQ96GN5 454 aa11.24□□□□□ -0.61
DDX52-212ENST00000616646 FMN1Q68DA7 1419 aa11.24□□□□□ -0.61
DDX52-212ENST00000616646 NCOA2Q15596 1464 aa11.22□□□□□ -0.61
DDX52-212ENST00000616646 ERICH6BQ5W0A0 696 aa11.22□□□□□ -0.61
DDX52-212ENST00000616646 DENND4BO75064 1496 aaPredicted RBP11.21□□□□□ -0.61
DDX52-212ENST00000616646 PTPN23Q9H3S7 1636 aa11.2□□□□□ -0.62
DDX52-212ENST00000616646 PDE4AP27815 886 aa11.2□□□□□ -0.62
DDX52-212ENST00000616646 CASKIN1Q8WXD9 1431 aa11.2□□□□□ -0.62
DDX52-212ENST00000616646 KDM6BO15054 1643 aa11.2□□□□□ -0.62
DDX52-212ENST00000616646 NCOA1Q15788 1441 aa11.19□□□□□ -0.62
DDX52-212ENST00000616646 MYOM3Q5VTT5 1437 aa11.18□□□□□ -0.62
DDX52-212ENST00000616646 PNISRQ8TF01 805 aaKnown RBP11.18□□□□□ -0.62
DDX52-212ENST00000616646 MYT1LQ9UL68 1186 aa11.18□□□□□ -0.62
DDX52-212ENST00000616646 MAP3K1Q13233 1512 aa11.18□□□□□ -0.62
DDX52-212ENST00000616646 CADPSQ9ULU8 1353 aa11.17□□□□□ -0.62
DDX52-212ENST00000616646 NCAPD3P42695 1498 aa11.16□□□□□ -0.62
DDX52-212ENST00000616646 CC2D1BQ5T0F9 858 aaKnown RBP11.16□□□□□ -0.62
DDX52-212ENST00000616646 RRP1P56182 461 aaKnown RBP11.15□□□□□ -0.62
DDX52-212ENST00000616646 RCAN3Q9UKA8 241 aa11.15□□□□□ -0.62
DDX52-212ENST00000616646 FYCO1Q9BQS8 1478 aa11.15□□□□□ -0.62
DDX52-212ENST00000616646 ST20-MTHFSA0A0A6YYL1 179 aa11.15□□□□□ -0.62
DDX52-212ENST00000616646 C20orf194Q5TEA3 1177 aa11.15□□□□□ -0.62
DDX52-212ENST00000616646 DNAJC5BQ9UF47 199 aa11.15□□□□□ -0.62
DDX52-212ENST00000616646 SMG6Q86US8 1419 aaKnown RBP11.14□□□□□ -0.63
DDX52-212ENST00000616646 CARD11Q9BXL7 1154 aa11.14□□□□□ -0.63
DDX52-212ENST00000616646 PKD2Q13563 968 aa11.13□□□□□ -0.63
DDX52-212ENST00000616646 DHX29Q7Z478 1369 aaKnown RBP11.13□□□□□ -0.63
DDX52-212ENST00000616646 NESP48681 1621 aa11.13□□□□□ -0.63
DDX52-212ENST00000616646 RGL3Q3MIN7 710 aa11.13□□□□□ -0.63
DDX52-212ENST00000616646 CRBNQ96SW2 442 aa11.13□□□□□ -0.63
DDX52-212ENST00000616646 USP47Q96K76 1375 aa11.12□□□□□ -0.63
DDX52-212ENST00000616646 ARID3AQ99856 593 aa11.12□□□□□ -0.63
DDX52-212ENST00000616646 NPM1P06748 294 aaKnown RBP eCLIP11.11□□□□□ -0.63
DDX52-212ENST00000616646 TRHP20396 242 aaPredicted RBP11.11□□□□□ -0.63
DDX52-212ENST00000616646 RGS3P49796 1198 aa11.11□□□□□ -0.63
DDX52-212ENST00000616646 CFAP43Q8NDM7 1665 aa11.11□□□□□ -0.63
DDX52-212ENST00000616646 ANKRD30BQ9BXX2 1392 aa11.11□□□□□ -0.63
DDX52-212ENST00000616646 BACH2Q9BYV9 841 aa11.1□□□□□ -0.63
DDX52-212ENST00000616646 MAGI3Q5TCQ9 1506 aa11.1□□□□□ -0.63
DDX52-212ENST00000616646 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.1□□□□□ -0.63
DDX52-212ENST00000616646 SNAPC4Q5SXM2 1469 aa11.1□□□□□ -0.63
DDX52-212ENST00000616646 DCAF11Q8TEB1 546 aa11.1□□□□□ -0.63
DDX52-212ENST00000616646 FRAT1Q92837 279 aaPredicted RBP11.09□□□□□ -0.63
DDX52-212ENST00000616646 FANCD2Q9BXW9 1451 aa11.08□□□□□ -0.64
DDX52-212ENST00000616646 CDK13Q14004 1512 aaKnown RBP11.08□□□□□ -0.64
DDX52-212ENST00000616646 RNF123Q5XPI4 1314 aa11.08□□□□□ -0.64
DDX52-212ENST00000616646 NFKBIBQ15653 356 aa11.07□□□□□ -0.64
DDX52-212ENST00000616646 POLA1P09884 1462 aaPredicted RBP11.07□□□□□ -0.64
DDX52-212ENST00000616646 SPATA31E1Q6ZUB1 1445 aa11.06□□□□□ -0.64
DDX52-212ENST00000616646 TCERG1O14776 1098 aaKnown RBP11.06□□□□□ -0.64
DDX52-212ENST00000616646 FRAT2O75474 233 aaPredicted RBP11.05□□□□□ -0.64
DDX52-212ENST00000616646 NBPF1Q3BBV0 1214 aa11.04□□□□□ -0.64
DDX52-212ENST00000616646 GSE1Q14687 1217 aa11.03□□□□□ -0.64
DDX52-212ENST00000616646 CFDP1Q9UEE9 299 aaPredicted RBP11.03□□□□□ -0.64
DDX52-212ENST00000616646 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.02□□□□□ -0.64
DDX52-212ENST00000616646 RPRD2Q5VT52 1461 aaKnown RBP11.02□□□□□ -0.65
DDX52-212ENST00000616646 TEX14Q8IWB6 1497 aa11.02□□□□□ -0.65
DDX52-212ENST00000616646 HMGXB3Q12766 1538 aa11.02□□□□□ -0.65
DDX52-212ENST00000616646 GRIN2BQ13224 1484 aa11.01□□□□□ -0.65
DDX52-212ENST00000616646 IGSF3O75054 1194 aa11.01□□□□□ -0.65
DDX52-212ENST00000616646 SPRYD3Q8NCJ5 442 aa11.01□□□□□ -0.65
DDX52-212ENST00000616646 PDS5BQ9NTI5 1447 aa11.01□□□□□ -0.65
DDX52-212ENST00000616646 CCDC146Q8IYE0 955 aa11□□□□□ -0.65
DDX52-212ENST00000616646 MYBBP1AQ9BQG0 1328 aaKnown RBP11□□□□□ -0.65
DDX52-212ENST00000616646 LRRIQ1Q96JM4 1722 aa11□□□□□ -0.65
DDX52-212ENST00000616646 ABCC5O15440 1437 aa10.99□□□□□ -0.65
DDX52-212ENST00000616646 TOPBP1Q92547 1522 aa10.99□□□□□ -0.65
DDX52-212ENST00000616646 PPM1GO15355 546 aaPredicted RBP10.99□□□□□ -0.65
DDX52-212ENST00000616646 SLKQ9H2G2 1235 aaPredicted RBP10.99□□□□□ -0.65
DDX52-212ENST00000616646 EFCAB5A4FU69 1503 aa10.99□□□□□ -0.65
DDX52-212ENST00000616646 BCORL1Q5H9F3 1711 aa10.99□□□□□ -0.65
DDX52-212ENST00000616646 UGGT2Q9NYU1 1516 aa10.98□□□□□ -0.65
DDX52-212ENST00000616646 PANK3Q9H999 370 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms