RNA–Protein interactions for RNA: ENST00000616449.1

ACSS3-208, Transcript of acyl-CoA synthetase short chain family member 3, humanhuman

Gene ACSS3, Length 3,833 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS3-208ENST00000616449 CANXP27824 592 aaKnown RBP17.07■□□□□ 0.32
ACSS3-208ENST00000616449 PTPRKQ15262 1439 aa17.07■□□□□ 0.32
ACSS3-208ENST00000616449 FYCO1Q9BQS8 1478 aa17.07■□□□□ 0.32
ACSS3-208ENST00000616449 KIF7Q2M1P5 1343 aa17.06■□□□□ 0.32
ACSS3-208ENST00000616449 TNNT2P45379 298 aaPredicted RBP17.04■□□□□ 0.32
ACSS3-208ENST00000616449 NAIPQ13075 1403 aa17.04■□□□□ 0.32
ACSS3-208ENST00000616449 CDK13Q14004 1512 aaKnown RBP17.03■□□□□ 0.32
ACSS3-208ENST00000616449 WDR43Q15061 677 aaKnown RBP eCLIP17.03■□□□□ 0.32
ACSS3-208ENST00000616449 NEUROD2Q15784 382 aa17.02■□□□□ 0.32
ACSS3-208ENST00000616449 ZBTB47Q9UFB7 747 aaPredicted RBP17.02■□□□□ 0.32
ACSS3-208ENST00000616449 CCDC7Q96M83 1385 aa17■□□□□ 0.31
ACSS3-208ENST00000616449 HFM1A2PYH4 1435 aa17■□□□□ 0.31
ACSS3-208ENST00000616449 LAS1LQ9Y4W2 734 aaKnown RBP16.99■□□□□ 0.31
ACSS3-208ENST00000616449 PRDM2Q13029 1718 aa16.98■□□□□ 0.31
ACSS3-208ENST00000616449 USP47Q96K76 1375 aa16.98■□□□□ 0.31
ACSS3-208ENST00000616449 ROCK2O75116 1388 aaKnown RBP16.97■□□□□ 0.31
ACSS3-208ENST00000616449 PLIN1O60240 522 aa16.96■□□□□ 0.31
ACSS3-208ENST00000616449 ANKRD30AQ9BXX3 1397 aa16.96■□□□□ 0.31
ACSS3-208ENST00000616449 ABCA10Q8WWZ4 1543 aa16.95■□□□□ 0.3
ACSS3-208ENST00000616449 PRG4Q92954 1404 aaPredicted RBP16.95■□□□□ 0.3
ACSS3-208ENST00000616449 DNMBPQ6XZF7 1577 aa16.95■□□□□ 0.3
ACSS3-208ENST00000616449 KNSTRNQ9Y448 316 aa16.94■□□□□ 0.3
ACSS3-208ENST00000616449 URB2Q14146 1524 aaKnown RBP16.94■□□□□ 0.3
ACSS3-208ENST00000616449 RGS3P49796 1198 aa16.92■□□□□ 0.3
ACSS3-208ENST00000616449 NUDCQ9Y266 331 aa16.92■□□□□ 0.3
ACSS3-208ENST00000616449 PLPPR3Q6T4P5 718 aa16.9■□□□□ 0.3
ACSS3-208ENST00000616449 CNTLNQ9NXG0 1405 aa16.9■□□□□ 0.3
ACSS3-208ENST00000616449 ARXQ96QS3 562 aa16.89■□□□□ 0.29
ACSS3-208ENST00000616449 NOP58Q9Y2X3 529 aaKnown RBP16.89■□□□□ 0.29
ACSS3-208ENST00000616449 EFCAB5A4FU69 1503 aa16.89■□□□□ 0.29
ACSS3-208ENST00000616449 CARMIL2Q6F5E8 1435 aa16.88■□□□□ 0.29
ACSS3-208ENST00000616449 SAFB2Q14151 953 aaKnown RBP eCLIP16.88■□□□□ 0.29
ACSS3-208ENST00000616449 ZBED9Q6R2W3 1325 aa16.88■□□□□ 0.29
ACSS3-208ENST00000616449 NBPF1Q3BBV0 1214 aa16.88■□□□□ 0.29
ACSS3-208ENST00000616449 MAP3K1Q13233 1512 aa16.87■□□□□ 0.29
ACSS3-208ENST00000616449 RCAN3Q9UKA8 241 aa16.87■□□□□ 0.29
ACSS3-208ENST00000616449 EXOC6Q8TAG9 804 aa16.87■□□□□ 0.29
ACSS3-208ENST00000616449 CCDC146Q8IYE0 955 aa16.87■□□□□ 0.29
ACSS3-208ENST00000616449 AKNAQ7Z591 1439 aa16.87■□□□□ 0.29
ACSS3-208ENST00000616449 NUTM2DQ5VT03 806 aaPredicted RBP16.85■□□□□ 0.29
ACSS3-208ENST00000616449 PANK3Q9H999 370 aa16.85■□□□□ 0.29
ACSS3-208ENST00000616449 EPRSP07814 1512 aaKnown RBP16.85■□□□□ 0.29
ACSS3-208ENST00000616449 TMF1P82094 1093 aa16.84■□□□□ 0.29
ACSS3-208ENST00000616449 CDCA7LQ96GN5 454 aa16.83■□□□□ 0.29
ACSS3-208ENST00000616449 RTN4Q9NQC3 1192 aaKnown RBP16.83■□□□□ 0.28
ACSS3-208ENST00000616449 FRAT1Q92837 279 aaPredicted RBP16.82■□□□□ 0.28
ACSS3-208ENST00000616449 KTN1Q86UP2 1357 aaKnown RBP16.82■□□□□ 0.28
ACSS3-208ENST00000616449 ZNF608Q9ULD9 1512 aaPredicted RBP16.82■□□□□ 0.28
ACSS3-208ENST00000616449 ANKRD50Q9ULJ7 1429 aa16.81■□□□□ 0.28
ACSS3-208ENST00000616449 EHBP1L1Q8N3D4 1523 aa16.81■□□□□ 0.28
ACSS3-208ENST00000616449 MSH5O43196 834 aa16.81■□□□□ 0.28
ACSS3-208ENST00000616449 PTPN23Q9H3S7 1636 aa16.8■□□□□ 0.28
ACSS3-208ENST00000616449 SKAP1Q86WV1 359 aa16.8■□□□□ 0.28
ACSS3-208ENST00000616449 GRIN2BQ13224 1484 aa16.79■□□□□ 0.28
ACSS3-208ENST00000616449 DAPK1P53355 1430 aa16.79■□□□□ 0.28
ACSS3-208ENST00000616449 SUPT6HQ7KZ85 1726 aaKnown RBP16.79■□□□□ 0.28
ACSS3-208ENST00000616449 KIF15Q9NS87 1388 aa16.79■□□□□ 0.28
ACSS3-208ENST00000616449 GGT6Q6P531 493 aa16.79■□□□□ 0.28
ACSS3-208ENST00000616449 DEKP35659 375 aaKnown RBP16.78■□□□□ 0.28
ACSS3-208ENST00000616449 NPM1P06748 294 aaKnown RBP eCLIP16.78■□□□□ 0.28
ACSS3-208ENST00000616449 PLB1Q6P1J6 1458 aa16.78■□□□□ 0.28
ACSS3-208ENST00000616449 NLRP13Q86W25 1043 aa16.78■□□□□ 0.28
ACSS3-208ENST00000616449 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.77■□□□□ 0.28
ACSS3-208ENST00000616449 KIF3BO15066 747 aa16.77■□□□□ 0.28
ACSS3-208ENST00000616449 SNAPC4Q5SXM2 1469 aa16.76■□□□□ 0.27
ACSS3-208ENST00000616449 STAG3Q9UJ98 1225 aa16.76■□□□□ 0.27
ACSS3-208ENST00000616449 ANKRD30BQ9BXX2 1392 aa16.76■□□□□ 0.27
ACSS3-208ENST00000616449 PPM1GO15355 546 aaPredicted RBP16.76■□□□□ 0.27
ACSS3-208ENST00000616449 PTPRGP23470 1445 aa16.76■□□□□ 0.27
ACSS3-208ENST00000616449 RALBP1Q15311 655 aa16.76■□□□□ 0.27
ACSS3-208ENST00000616449 THOC2Q8NI27 1593 aaKnown RBP16.75■□□□□ 0.27
ACSS3-208ENST00000616449 ABCC5O15440 1437 aa16.75■□□□□ 0.27
ACSS3-208ENST00000616449 SLC4A3P48751 1232 aa16.75■□□□□ 0.27
ACSS3-208ENST00000616449 MYBBP1AQ9BQG0 1328 aaKnown RBP16.75■□□□□ 0.27
ACSS3-208ENST00000616449 CUL7Q14999 1698 aa16.75■□□□□ 0.27
ACSS3-208ENST00000616449 CCDC144AA2RUR9 1427 aa16.74■□□□□ 0.27
ACSS3-208ENST00000616449 NEFMP07197 916 aa16.74■□□□□ 0.27
ACSS3-208ENST00000616449 LAMC3Q9Y6N6 1575 aa16.73■□□□□ 0.27
ACSS3-208ENST00000616449 SLC24A1O60721 1099 aa16.73■□□□□ 0.27
ACSS3-208ENST00000616449 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.73■□□□□ 0.27
ACSS3-208ENST00000616449 PAK3O75914 559 aaPredicted RBP16.72■□□□□ 0.27
ACSS3-208ENST00000616449 RRP7AQ9Y3A4 280 aaKnown RBP16.72■□□□□ 0.27
ACSS3-208ENST00000616449 STK26Q9P289 416 aa16.71■□□□□ 0.27
ACSS3-208ENST00000616449 CFAP43Q8NDM7 1665 aa16.71■□□□□ 0.27
ACSS3-208ENST00000616449 RRP1P56182 461 aaKnown RBP16.71■□□□□ 0.27
ACSS3-208ENST00000616449 PNISRQ8TF01 805 aaKnown RBP16.71■□□□□ 0.27
ACSS3-208ENST00000616449 AFAP1Q8N556 730 aa16.71■□□□□ 0.27
ACSS3-208ENST00000616449 CRBNQ96SW2 442 aa16.71■□□□□ 0.27
ACSS3-208ENST00000616449 EFCAB2Q5VUJ9 269 aa16.7■□□□□ 0.26
ACSS3-208ENST00000616449 IQGAP2Q13576 1575 aa16.7■□□□□ 0.26
ACSS3-208ENST00000616449 ERICH6BQ5W0A0 696 aa16.7■□□□□ 0.26
ACSS3-208ENST00000616449 MIA2Q96PC5 1412 aa16.7■□□□□ 0.26
ACSS3-208ENST00000616449 HECW1Q76N89 1606 aa16.68■□□□□ 0.26
ACSS3-208ENST00000616449 TRAK1Q9UPV9 953 aa16.68■□□□□ 0.26
ACSS3-208ENST00000616449 TROQ12816 1431 aaPredicted RBP16.67■□□□□ 0.26
ACSS3-208ENST00000616449 U2SURPO15042 1029 aaKnown RBP16.67■□□□□ 0.26
ACSS3-208ENST00000616449 BCL2L13Q9BXK5 485 aa16.67■□□□□ 0.26
ACSS3-208ENST00000616449 SPAG9O60271 1321 aaKnown RBP16.67■□□□□ 0.26
ACSS3-208ENST00000616449 CTTNBP2Q8WZ74 1663 aa16.67■□□□□ 0.26
ACSS3-208ENST00000616449 KIAA1107Q9UPP5 1409 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms