RNA–Protein interactions for RNA: ENST00000616449.1

ACSS3-208, Transcript of acyl-CoA synthetase short chain family member 3, humanhuman

Gene ACSS3, Length 3,833 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS3-208ENST00000616449 NISCHQ9Y2I1 1504 aa24.12■■□□□ 1.45
ACSS3-208ENST00000616449 DCAF8L2P0C7V8 631 aa22.58■■□□□ 1.21
ACSS3-208ENST00000616449 SHROOM4Q9ULL8 1493 aa22.44■■□□□ 1.18
ACSS3-208ENST00000616449 SUPT5HO00267 1087 aaKnown RBP22.29■■□□□ 1.16
ACSS3-208ENST00000616449 EHMT2Q96KQ7 1210 aa21.29■■□□□ 1
ACSS3-208ENST00000616449 PCGF6Q9BYE7 350 aa21.01■□□□□ 0.95
ACSS3-208ENST00000616449 FAM9AQ8IZU1 332 aaPredicted RBP20.89■□□□□ 0.94
ACSS3-208ENST00000616449 CHIC1Q5VXU3 224 aa20.73■□□□□ 0.91
ACSS3-208ENST00000616449 LOC105371045A0A1W2PR82 267 aa20.69■□□□□ 0.9
ACSS3-208ENST00000616449 TTBK1Q5TCY1 1321 aaPredicted RBP20.52■□□□□ 0.88
ACSS3-208ENST00000616449 PPARGC1BQ86YN6 1023 aaKnown RBP20.46■□□□□ 0.87
ACSS3-208ENST00000616449 TRIM41Q8WV44 630 aa20.4■□□□□ 0.86
ACSS3-208ENST00000616449 HRCP23327 699 aa20.33■□□□□ 0.85
ACSS3-208ENST00000616449 ZCCHC6Q5VYS8 1495 aaKnown RBP20.28■□□□□ 0.84
ACSS3-208ENST00000616449 CCDC180Q9P1Z9 1646 aa20.16■□□□□ 0.82
ACSS3-208ENST00000616449 MYO15BQ96JP2 1530 aa20.15■□□□□ 0.82
ACSS3-208ENST00000616449 RANGAP1P46060 587 aaPredicted RBP20.06■□□□□ 0.8
ACSS3-208ENST00000616449 TRIM26Q12899 539 aaPredicted RBP19.99■□□□□ 0.79
ACSS3-208ENST00000616449 ABCC9O60706 1549 aa19.93■□□□□ 0.78
ACSS3-208ENST00000616449 CCER1Q8TC90 406 aaPredicted RBP19.84■□□□□ 0.77
ACSS3-208ENST00000616449 UBTFP17480 764 aaKnown RBP19.78■□□□□ 0.76
ACSS3-208ENST00000616449 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.7■□□□□ 0.74
ACSS3-208ENST00000616449 SCRIBQ14160 1630 aa19.7■□□□□ 0.74
ACSS3-208ENST00000616449 PABPN1Q86U42 306 aaKnown RBP eCLIP19.64■□□□□ 0.73
ACSS3-208ENST00000616449 ZEB1P37275 1124 aaPredicted RBP19.62■□□□□ 0.73
ACSS3-208ENST00000616449 APLP2Q06481 763 aa19.56■□□□□ 0.72
ACSS3-208ENST00000616449 YTHDC1Q96MU7 727 aaKnown RBP19.49■□□□□ 0.71
ACSS3-208ENST00000616449 DCAF1Q9Y4B6 1507 aa19.47■□□□□ 0.71
ACSS3-208ENST00000616449 HNRNPUL2Q1KMD3 747 aaKnown RBP19.44■□□□□ 0.7
ACSS3-208ENST00000616449 RSF1Q96T23 1441 aaPredicted RBP19.41■□□□□ 0.7
ACSS3-208ENST00000616449 ATP1B4Q9UN42 357 aaPredicted RBP19.28■□□□□ 0.68
ACSS3-208ENST00000616449 ITGAEP38570 1179 aa19.25■□□□□ 0.67
ACSS3-208ENST00000616449 CECR2Q9BXF3 1484 aa19.24■□□□□ 0.67
ACSS3-208ENST00000616449 CENPBP07199 599 aaPredicted RBP19.16■□□□□ 0.66
ACSS3-208ENST00000616449 DIEXFQ68CQ4 756 aaKnown RBP19.15■□□□□ 0.66
ACSS3-208ENST00000616449 RB1CC1Q8TDY2 1594 aa19.13■□□□□ 0.65
ACSS3-208ENST00000616449 CSRNP3Q8WYN3 585 aa19.06■□□□□ 0.64
ACSS3-208ENST00000616449 MROH2BQ7Z745 1585 aa18.97■□□□□ 0.63
ACSS3-208ENST00000616449 GTF3C3Q9Y5Q9 886 aa18.93■□□□□ 0.62
ACSS3-208ENST00000616449 SCAF1Q9H7N4 1312 aaKnown RBP18.9■□□□□ 0.62
ACSS3-208ENST00000616449 NACADO15069 1562 aa18.87■□□□□ 0.61
ACSS3-208ENST00000616449 NEUROD1Q13562 356 aa18.84■□□□□ 0.61
ACSS3-208ENST00000616449 WIZO95785 1651 aa18.8■□□□□ 0.6
ACSS3-208ENST00000616449 ABCC8Q09428 1581 aa18.8■□□□□ 0.6
ACSS3-208ENST00000616449 SOGA1O94964 1423 aa18.79■□□□□ 0.6
ACSS3-208ENST00000616449 ACIN1Q9UKV3 1341 aaKnown RBP18.77■□□□□ 0.6
ACSS3-208ENST00000616449 P3H3Q8IVL6 736 aa18.77■□□□□ 0.59
ACSS3-208ENST00000616449 ZNF316A6NFI3 1004 aaPredicted RBP18.76■□□□□ 0.59
ACSS3-208ENST00000616449 CEP162Q5TB80 1403 aa18.75■□□□□ 0.59
ACSS3-208ENST00000616449 CCDC88BA6NC98 1476 aa18.72■□□□□ 0.59
ACSS3-208ENST00000616449 FAM50AQ14320 339 aaKnown RBP18.68■□□□□ 0.58
ACSS3-208ENST00000616449 PELP1Q8IZL8 1130 aaKnown RBP18.66■□□□□ 0.58
ACSS3-208ENST00000616449 CNGB1Q14028 1251 aaPredicted RBP18.61■□□□□ 0.57
ACSS3-208ENST00000616449 MIER1Q8N108 512 aa18.6■□□□□ 0.57
ACSS3-208ENST00000616449 RUSC2Q8N2Y8 1516 aa18.58■□□□□ 0.56
ACSS3-208ENST00000616449 BAZ1AQ9NRL2 1556 aaPredicted RBP18.58■□□□□ 0.56
ACSS3-208ENST00000616449 WRNQ14191 1432 aaPredicted RBP eCLIP18.55■□□□□ 0.56
ACSS3-208ENST00000616449 CLIP1P30622 1438 aa18.55■□□□□ 0.56
ACSS3-208ENST00000616449 ARID3CA6NKF2 412 aa18.53■□□□□ 0.56
ACSS3-208ENST00000616449 BCANQ96GW7 911 aa18.51■□□□□ 0.55
ACSS3-208ENST00000616449 TNIKQ9UKE5 1360 aa18.49■□□□□ 0.55
ACSS3-208ENST00000616449 HIRIP3Q9BW71 556 aaPredicted RBP18.45■□□□□ 0.54
ACSS3-208ENST00000616449 GOLGA3Q08378 1498 aa18.45■□□□□ 0.54
ACSS3-208ENST00000616449 POLR3GLQ9BT43 218 aa18.39■□□□□ 0.54
ACSS3-208ENST00000616449 BAZ1BQ9UIG0 1483 aaKnown RBP18.35■□□□□ 0.53
ACSS3-208ENST00000616449 KANK4Q5T7N3 995 aaPredicted RBP18.33■□□□□ 0.52
ACSS3-208ENST00000616449 NEFLP07196 543 aa18.31■□□□□ 0.52
ACSS3-208ENST00000616449 TOP2AP11388 1531 aaKnown RBP18.3■□□□□ 0.52
ACSS3-208ENST00000616449 SMARCA4P51532 1647 aa18.29■□□□□ 0.52
ACSS3-208ENST00000616449 DDX10Q13206 875 aaKnown RBP18.29■□□□□ 0.52
ACSS3-208ENST00000616449 EEA1Q15075 1411 aa18.29■□□□□ 0.52
ACSS3-208ENST00000616449 CEP164Q9UPV0 1460 aa18.27■□□□□ 0.52
ACSS3-208ENST00000616449 TRIM52Q96A61 297 aa18.27■□□□□ 0.52
ACSS3-208ENST00000616449 RAPGEF2Q9Y4G8 1499 aa18.2■□□□□ 0.5
ACSS3-208ENST00000616449 SMARCA2P51531 1590 aa18.2■□□□□ 0.5
ACSS3-208ENST00000616449 SIN3AQ96ST3 1273 aa18.19■□□□□ 0.5
ACSS3-208ENST00000616449 CHIC2Q9UKJ5 165 aa18.18■□□□□ 0.5
ACSS3-208ENST00000616449 VPS8Q8N3P4 1428 aa18.13■□□□□ 0.49
ACSS3-208ENST00000616449 ZNF326Q5BKZ1 582 aaKnown RBP18.13■□□□□ 0.49
ACSS3-208ENST00000616449 FBLN2P98095 1184 aa18.09■□□□□ 0.49
ACSS3-208ENST00000616449 UNC13AQ9UPW8 1703 aa18.07■□□□□ 0.48
ACSS3-208ENST00000616449 ANP32CO43423 234 aa18.07■□□□□ 0.48
ACSS3-208ENST00000616449 FKBP8Q14318 412 aa18.06■□□□□ 0.48
ACSS3-208ENST00000616449 ATAD2BQ9ULI0 1458 aa18.05■□□□□ 0.48
ACSS3-208ENST00000616449 KIF27Q86VH2 1401 aa18.05■□□□□ 0.48
ACSS3-208ENST00000616449 SENP3-EIF4A1A0A087X0R7 540 aa18.04■□□□□ 0.48
ACSS3-208ENST00000616449 EIF4G1Q04637 1599 aaKnown RBP18.03■□□□□ 0.48
ACSS3-208ENST00000616449 ERICH6Q7L0X2 663 aa18.01■□□□□ 0.47
ACSS3-208ENST00000616449 KCNH8Q96L42 1107 aa18.01■□□□□ 0.47
ACSS3-208ENST00000616449 RRP7BPQ9NSQ0 103 aa18.01■□□□□ 0.47
ACSS3-208ENST00000616449 CUX2O14529 1486 aa17.99■□□□□ 0.47
ACSS3-208ENST00000616449 IRX6P78412 446 aaPredicted RBP17.98■□□□□ 0.47
ACSS3-208ENST00000616449 BICRAQ9NZM4 1560 aa17.98■□□□□ 0.47
ACSS3-208ENST00000616449 ZNF777Q9ULD5 760 aaPredicted RBP17.98■□□□□ 0.47
ACSS3-208ENST00000616449 CCNB3Q8WWL7 1395 aa17.96■□□□□ 0.47
ACSS3-208ENST00000616449 TONSLQ96HA7 1378 aa17.95■□□□□ 0.46
ACSS3-208ENST00000616449 SYNJ1O43426 1573 aa17.94■□□□□ 0.46
ACSS3-208ENST00000616449 MTUS2Q5JR59 1369 aa17.92■□□□□ 0.46
ACSS3-208ENST00000616449 CARMIL1Q5VZK9 1371 aa17.91■□□□□ 0.46
ACSS3-208ENST00000616449 HNRNPUQ00839 825 aaKnown RBP eCLIP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms