RNA–Protein interactions for RNA: ENST00000611745.1

SRRM3-204, Transcript of serine/arginine repetitive matrix 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRRM3, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-204ENST00000611745 ZNF777Q9ULD5 760 aaPredicted RBP25.05■■□□□ 1.6
SRRM3-204ENST00000611745 SMG6Q86US8 1419 aaKnown RBP25.04■■□□□ 1.6
SRRM3-204ENST00000611745 WASHC2CQ9Y4E1 1318 aa25.02■■□□□ 1.6
SRRM3-204ENST00000611745 MS4A1P11836 297 aa25■■□□□ 1.59
SRRM3-204ENST00000611745 IGF1RP08069 1367 aa25■■□□□ 1.59
SRRM3-204ENST00000611745 CC2D1BQ5T0F9 858 aaKnown RBP25■■□□□ 1.59
SRRM3-204ENST00000611745 PNNQ9H307 717 aaKnown RBP25■■□□□ 1.59
SRRM3-204ENST00000611745 UACAQ9BZF9 1416 aa24.98■■□□□ 1.59
SRRM3-204ENST00000611745 CARD11Q9BXL7 1154 aa24.97■■□□□ 1.59
SRRM3-204ENST00000611745 HSP90AA2PQ14568 343 aaPredicted RBP24.97■■□□□ 1.59
SRRM3-204ENST00000611745 FMN1Q68DA7 1419 aa24.97■■□□□ 1.59
SRRM3-204ENST00000611745 PNISRQ8TF01 805 aaKnown RBP24.96■■□□□ 1.59
SRRM3-204ENST00000611745 CANXP27824 592 aaKnown RBP24.95■■□□□ 1.59
SRRM3-204ENST00000611745 ERICH3Q5RHP9 1530 aa24.95■■□□□ 1.58
SRRM3-204ENST00000611745 HSP90AA1P07900 732 aaKnown RBP24.94■■□□□ 1.58
SRRM3-204ENST00000611745 POGKQ9P215 609 aa24.93■■□□□ 1.58
SRRM3-204ENST00000611745 DCAF11Q8TEB1 546 aa24.92■■□□□ 1.58
SRRM3-204ENST00000611745 FAM43AQ8N2R8 423 aa24.92■■□□□ 1.58
SRRM3-204ENST00000611745 TIAM1Q13009 1591 aa24.89■■□□□ 1.58
SRRM3-204ENST00000611745 ZMYND15Q9H091 742 aa24.87■■□□□ 1.57
SRRM3-204ENST00000611745 TOP2BQ02880 1626 aa24.87■■□□□ 1.57
SRRM3-204ENST00000611745 FGD6Q6ZV73 1430 aa24.86■■□□□ 1.57
SRRM3-204ENST00000611745 FAM161AQ3B820 660 aa24.86■■□□□ 1.57
SRRM3-204ENST00000611745 BECN1Q14457 450 aa24.86■■□□□ 1.57
SRRM3-204ENST00000611745 ARID3AQ99856 593 aa24.85■■□□□ 1.57
SRRM3-204ENST00000611745 AQRO60306 1485 aaKnown RBP eCLIP24.84■■□□□ 1.57
SRRM3-204ENST00000611745 C20orf194Q5TEA3 1177 aa24.84■■□□□ 1.57
SRRM3-204ENST00000611745 UPF2Q9HAU5 1272 aaKnown RBP24.82■■□□□ 1.56
SRRM3-204ENST00000611745 L1TD1Q5T7N2 865 aaKnown RBP24.81■■□□□ 1.56
SRRM3-204ENST00000611745 CUX1P39880 1505 aa24.79■■□□□ 1.56
SRRM3-204ENST00000611745 ST20-MTHFSA0A0A6YYL1 179 aa24.79■■□□□ 1.56
SRRM3-204ENST00000611745 TRIM44Q96DX7 344 aaPredicted RBP24.79■■□□□ 1.56
SRRM3-204ENST00000611745 RGL3Q3MIN7 710 aa24.78■■□□□ 1.56
SRRM3-204ENST00000611745 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.78■■□□□ 1.56
SRRM3-204ENST00000611745 PTPRKQ15262 1439 aa24.78■■□□□ 1.56
SRRM3-204ENST00000611745 WDR43Q15061 677 aaKnown RBP eCLIP24.76■■□□□ 1.55
SRRM3-204ENST00000611745 RRAGDQ9NQL2 400 aaPredicted RBP24.76■■□□□ 1.55
SRRM3-204ENST00000611745 GOLGA6L3A6NEY3 463 aa24.75■■□□□ 1.55
SRRM3-204ENST00000611745 USP47Q96K76 1375 aa24.75■■□□□ 1.55
SRRM3-204ENST00000611745 NCOA1Q15788 1441 aa24.75■■□□□ 1.55
SRRM3-204ENST00000611745 NAIPQ13075 1403 aa24.74■■□□□ 1.55
SRRM3-204ENST00000611745 HFM1A2PYH4 1435 aa24.73■■□□□ 1.55
SRRM3-204ENST00000611745 MYBBP1AQ9BQG0 1328 aaKnown RBP24.72■■□□□ 1.55
SRRM3-204ENST00000611745 RNF123Q5XPI4 1314 aa24.72■■□□□ 1.55
SRRM3-204ENST00000611745 NLRP13Q86W25 1043 aa24.7■■□□□ 1.54
SRRM3-204ENST00000611745 CENPQQ7L2Z9 268 aaPredicted RBP24.7■■□□□ 1.54
SRRM3-204ENST00000611745 PKD2Q13563 968 aa24.68■■□□□ 1.54
SRRM3-204ENST00000611745 RALBP1Q15311 655 aa24.68■■□□□ 1.54
SRRM3-204ENST00000611745 PDE3BQ13370 1112 aa24.67■■□□□ 1.54
SRRM3-204ENST00000611745 ZNF644Q9H582 1327 aaPredicted RBP24.64■■□□□ 1.53
SRRM3-204ENST00000611745 NEUROD2Q15784 382 aa24.64■■□□□ 1.53
SRRM3-204ENST00000611745 KIF15Q9NS87 1388 aa24.63■■□□□ 1.53
SRRM3-204ENST00000611745 PANK2Q9BZ23 570 aa24.63■■□□□ 1.53
SRRM3-204ENST00000611745 KTN1Q86UP2 1357 aaKnown RBP24.61■■□□□ 1.53
SRRM3-204ENST00000611745 MYH16Q9H6N6 1097 aa24.61■■□□□ 1.53
SRRM3-204ENST00000611745 CCDC146Q8IYE0 955 aa24.6■■□□□ 1.53
SRRM3-204ENST00000611745 PCF11O94913 1555 aaKnown RBP24.59■■□□□ 1.53
SRRM3-204ENST00000611745 A0A0U1RQG5 324 aaPredicted RBP24.59■■□□□ 1.53
SRRM3-204ENST00000611745 CFTRP13569 1480 aa24.58■■□□□ 1.53
SRRM3-204ENST00000611745 ZBTB7CA1YPR0 619 aa24.58■■□□□ 1.53
SRRM3-204ENST00000611745 TDRD9Q8NDG6 1382 aaKnown RBP24.57■■□□□ 1.52
SRRM3-204ENST00000611745 MAP3K1Q13233 1512 aa24.57■■□□□ 1.52
SRRM3-204ENST00000611745 NCOA2Q15596 1464 aa24.57■■□□□ 1.52
SRRM3-204ENST00000611745 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.56■■□□□ 1.52
SRRM3-204ENST00000611745 C8orf34Q49A92 452 aa24.55■■□□□ 1.52
SRRM3-204ENST00000611745 MYOM3Q5VTT5 1437 aa24.55■■□□□ 1.52
SRRM3-204ENST00000611745 ANP32BQ92688 251 aaKnown RBP24.54■■□□□ 1.52
SRRM3-204ENST00000611745 FGD5Q6ZNL6 1462 aa24.53■■□□□ 1.52
SRRM3-204ENST00000611745 PODXL2Q9NZ53 605 aa24.53■■□□□ 1.52
SRRM3-204ENST00000611745 RAD54L2Q9Y4B4 1467 aa24.52■■□□□ 1.52
SRRM3-204ENST00000611745 CASKIN1Q8WXD9 1431 aa24.51■■□□□ 1.51
SRRM3-204ENST00000611745 ADAMTS8Q9UP79 889 aa24.5■■□□□ 1.51
SRRM3-204ENST00000611745 XRCC6P12956 609 aaKnown RBP eCLIP24.5■■□□□ 1.51
SRRM3-204ENST00000611745 COG6Q9Y2V7 657 aa24.5■■□□□ 1.51
SRRM3-204ENST00000611745 CFDP1Q9UEE9 299 aaPredicted RBP24.5■■□□□ 1.51
SRRM3-204ENST00000611745 DHX29Q7Z478 1369 aaKnown RBP24.5■■□□□ 1.51
SRRM3-204ENST00000611745 GOLGA2Q08379 1002 aa24.49■■□□□ 1.51
SRRM3-204ENST00000611745 FOXD4L1Q9NU39 408 aa24.49■■□□□ 1.51
SRRM3-204ENST00000611745 BRD4O60885 1362 aaPredicted RBP24.49■■□□□ 1.51
SRRM3-204ENST00000611745 MFAP1P55081 439 aaKnown RBP24.48■■□□□ 1.51
SRRM3-204ENST00000611745 CLUAP1Q96AJ1 413 aa24.48■■□□□ 1.51
SRRM3-204ENST00000611745 PANK3Q9H999 370 aa24.48■■□□□ 1.51
SRRM3-204ENST00000611745 PTPN23Q9H3S7 1636 aa24.48■■□□□ 1.51
SRRM3-204ENST00000611745 RBM10P98175 930 aaKnown RBP24.47■■□□□ 1.51
SRRM3-204ENST00000611745 SEC24BO95487 1268 aa24.47■■□□□ 1.51
SRRM3-204ENST00000611745 NCLP19338 710 aaKnown RBP24.47■■□□□ 1.51
SRRM3-204ENST00000611745 RRP9O43818 475 aaKnown RBP24.46■■□□□ 1.51
SRRM3-204ENST00000611745 BCAR3O75815 825 aa24.46■■□□□ 1.51
SRRM3-204ENST00000611745 FBLN2P98095 1184 aa24.45■■□□□ 1.5
SRRM3-204ENST00000611745 KNSTRNQ9Y448 316 aa24.44■■□□□ 1.5
SRRM3-204ENST00000611745 BICRAQ9NZM4 1560 aa24.44■■□□□ 1.5
SRRM3-204ENST00000611745 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.43■■□□□ 1.5
SRRM3-204ENST00000611745 BCL2L13Q9BXK5 485 aa24.43■■□□□ 1.5
SRRM3-204ENST00000611745 UNC13AQ9UPW8 1703 aa24.43■■□□□ 1.5
SRRM3-204ENST00000611745 TRAK2O60296 914 aa24.42■■□□□ 1.5
SRRM3-204ENST00000611745 ROCK2O75116 1388 aaKnown RBP24.42■■□□□ 1.5
SRRM3-204ENST00000611745 FAM13BQ9NYF5 915 aa24.42■■□□□ 1.5
SRRM3-204ENST00000611745 PANK1Q8TE04 598 aa24.42■■□□□ 1.5
SRRM3-204ENST00000611745 FYCO1Q9BQS8 1478 aa24.41■■□□□ 1.5
SRRM3-204ENST00000611745 BIVM-ERCC5R4GMW8 1640 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms